RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 MRPL58Q14197 206 aaKnown RBP11.81□□□□□ -0.52
USP49-204ENST00000423567 KCNB1Q14721 858 aa11.81□□□□□ -0.52
USP49-204ENST00000423567 TPGS2Q68CL5 300 aa11.81□□□□□ -0.52
USP49-204ENST00000423567 OVOS1Q6IE37 1185 aa11.81□□□□□ -0.52
USP49-204ENST00000423567 RSPO2Q6UXX9 243 aaPredicted RBP11.81□□□□□ -0.52
USP49-204ENST00000423567 RNF135Q8IUD6 432 aa11.81□□□□□ -0.52
USP49-204ENST00000423567 CBWD2Q8IUF1 395 aa11.81□□□□□ -0.52
USP49-204ENST00000423567 C12orf56Q8IXR9 622 aa11.81□□□□□ -0.52
USP49-204ENST00000423567 TMEM130Q8N3G9 435 aa11.81□□□□□ -0.52
USP49-204ENST00000423567 CSGALNACT2Q8N6G5 542 aa11.81□□□□□ -0.52
USP49-204ENST00000423567 RDH13Q8NBN7 331 aa11.81□□□□□ -0.52
USP49-204ENST00000423567 KIAA0895Q8NCT3 520 aa11.81□□□□□ -0.52
USP49-204ENST00000423567 ZNF461Q8TAF7 563 aa11.81□□□□□ -0.52
USP49-204ENST00000423567 SLC7A14Q8TBB6 771 aa11.81□□□□□ -0.52
USP49-204ENST00000423567 SENP8Q96LD8 212 aa11.81□□□□□ -0.52
USP49-204ENST00000423567 ITGA11Q9UKX5 1188 aa11.81□□□□□ -0.52
USP49-204ENST00000423567 MAFFQ9ULX9 164 aa11.81□□□□□ -0.52
USP49-204ENST00000423567 POLIQ9UNA4 740 aa11.81□□□□□ -0.52
USP49-204ENST00000423567 USTQ9Y2C2 406 aa11.81□□□□□ -0.52
USP49-204ENST00000423567 TIMM13Q9Y5L4 95 aaPredicted RBP11.81□□□□□ -0.52
USP49-204ENST00000423567 SPTBN5Q9NRC6 3674 aaKnown RBP11.81□□□□□ -0.52
USP49-204ENST00000423567 KPNA7A9QM74 516 aa11.8□□□□□ -0.52
USP49-204ENST00000423567 PI4K2BG5E9Z4 385 aa11.8□□□□□ -0.52
USP49-204ENST00000423567 PDXKO00764 312 aa11.8□□□□□ -0.52
USP49-204ENST00000423567 CYB561D2O14569 222 aa11.8□□□□□ -0.52
USP49-204ENST00000423567 CALUO43852 315 aaPredicted RBP11.8□□□□□ -0.52
USP49-204ENST00000423567 TBC1D4O60343 1298 aa11.8□□□□□ -0.52
USP49-204ENST00000423567 KINO60870 393 aaKnown RBP11.8□□□□□ -0.52
USP49-204ENST00000423567 LRG1P02750 347 aa11.8□□□□□ -0.52
USP49-204ENST00000423567 ITGB3P05106 788 aa11.8□□□□□ -0.52
USP49-204ENST00000423567 DLATP10515 647 aaKnown RBP11.8□□□□□ -0.52
USP49-204ENST00000423567 ATF2P15336 505 aa11.8□□□□□ -0.52
USP49-204ENST00000423567 TNNI1P19237 187 aa11.8□□□□□ -0.52
USP49-204ENST00000423567 POLR2BP30876 1174 aaKnown RBP11.8□□□□□ -0.52
USP49-204ENST00000423567 HOXA9P31269 272 aa11.8□□□□□ -0.52
USP49-204ENST00000423567 MYO1EQ12965 1108 aa11.8□□□□□ -0.52
USP49-204ENST00000423567 DUOXA2Q1HG44 320 aa11.8□□□□□ -0.52
USP49-204ENST00000423567 WDR49Q8IV35 697 aa11.8□□□□□ -0.52
USP49-204ENST00000423567 FMR1NBQ8N0W7 255 aaPredicted RBP11.8□□□□□ -0.52
USP49-204ENST00000423567 THEM5Q8N1Q8 247 aa11.8□□□□□ -0.52
USP49-204ENST00000423567 ZNF707Q96C28 371 aaPredicted RBP11.8□□□□□ -0.52
USP49-204ENST00000423567 TIGD1Q96MW7 591 aa11.8□□□□□ -0.52
USP49-204ENST00000423567 MTMR12Q9C0I1 747 aa11.8□□□□□ -0.52
USP49-204ENST00000423567 CYP4F11Q9HBI6 524 aa11.8□□□□□ -0.52
USP49-204ENST00000423567 WDR6Q9NNW5 1121 aaKnown RBP11.8□□□□□ -0.52
USP49-204ENST00000423567 INTS13Q9NVM9 706 aa11.8□□□□□ -0.52
USP49-204ENST00000423567 AGAP1Q9UPQ3 857 aa11.8□□□□□ -0.52
USP49-204ENST00000423567 CLUHO75153 1309 aa11.8□□□□□ -0.52
USP49-204ENST00000423567 WDR27A2RRH5 827 aa11.79□□□□□ -0.52
USP49-204ENST00000423567 C2CD4DB7Z1M9 353 aa11.79□□□□□ -0.52
USP49-204ENST00000423567 SPTLC1O15269 473 aa11.79□□□□□ -0.52
USP49-204ENST00000423567 CCL16O15467 120 aa11.79□□□□□ -0.52
USP49-204ENST00000423567 HUS1O60921 280 aa11.79□□□□□ -0.52
USP49-204ENST00000423567 ABLIM3O94929 683 aa11.79□□□□□ -0.52
USP49-204ENST00000423567 POU2F2P09086 479 aa11.79□□□□□ -0.52
USP49-204ENST00000423567 GBP2P32456 591 aaPredicted RBP11.79□□□□□ -0.52
USP49-204ENST00000423567 WNT7BP56706 349 aa11.79□□□□□ -0.52
USP49-204ENST00000423567 CYP24A1Q07973 514 aa11.79□□□□□ -0.52
USP49-204ENST00000423567 BFSP1Q12934 665 aa11.79□□□□□ -0.52
USP49-204ENST00000423567 PNOCQ13519 176 aa11.79□□□□□ -0.52
USP49-204ENST00000423567 MYBPC2Q14324 1141 aa11.79□□□□□ -0.52
USP49-204ENST00000423567 PSMD6Q15008 389 aa11.79□□□□□ -0.52
USP49-204ENST00000423567 LMBRD2Q68DH5 695 aaPredicted RBP11.79□□□□□ -0.52
USP49-204ENST00000423567 TCEAL8Q8IYN2 117 aa11.79□□□□□ -0.52
USP49-204ENST00000423567 ELMOD1Q8N336 334 aa11.79□□□□□ -0.52
USP49-204ENST00000423567 LRRC52Q8N7C0 313 aa11.79□□□□□ -0.52
USP49-204ENST00000423567 C1orf127Q8N9H9 656 aa11.79□□□□□ -0.52
USP49-204ENST00000423567 TMC2Q8TDI7 906 aa11.79□□□□□ -0.52
USP49-204ENST00000423567 CCDC127Q96BQ5 260 aa11.79□□□□□ -0.52
USP49-204ENST00000423567 GTPBP4Q9BZE4 634 aaKnown RBP11.79□□□□□ -0.52
USP49-204ENST00000423567 EPHX3Q9H6B9 360 aa11.79□□□□□ -0.52
USP49-204ENST00000423567 AFF4Q9UHB7 1163 aaKnown RBP11.79□□□□□ -0.52
USP49-204ENST00000423567 MUTYHQ9UIF7 546 aa11.79□□□□□ -0.52
USP49-204ENST00000423567 FRMD4BQ9Y2L6 1034 aa11.79□□□□□ -0.52
USP49-204ENST00000423567 TRIP11Q15643 1979 aa11.79□□□□□ -0.52
USP49-204ENST00000423567 VCANP13611 3396 aa11.79□□□□□ -0.52
USP49-204ENST00000423567 CLSTN1O94985 981 aa11.78□□□□□ -0.52
USP49-204ENST00000423567 PAPLNO95428 1278 aa11.78□□□□□ -0.52
USP49-204ENST00000423567 NR3C1P04150 777 aa11.78□□□□□ -0.52
USP49-204ENST00000423567 CYP11A1P05108 521 aa11.78□□□□□ -0.52
USP49-204ENST00000423567 RPL13P26373 211 aaKnown RBP11.78□□□□□ -0.52
USP49-204ENST00000423567 ADCY1Q08828 1119 aa11.78□□□□□ -0.52
USP49-204ENST00000423567 GPR17Q13304 367 aa11.78□□□□□ -0.52
USP49-204ENST00000423567 PLD1Q13393 1074 aa11.78□□□□□ -0.52
USP49-204ENST00000423567 SNW1Q13573 536 aaKnown RBP11.78□□□□□ -0.52
USP49-204ENST00000423567 GRASPQ7Z6J2 395 aaPredicted RBP11.78□□□□□ -0.52
USP49-204ENST00000423567 SLC9A9Q8IVB4 645 aa11.78□□□□□ -0.52
USP49-204ENST00000423567 ZDHHC14Q8IZN3 488 aa11.78□□□□□ -0.52
USP49-204ENST00000423567 GUF1Q8N442 669 aaKnown RBP11.78□□□□□ -0.52
USP49-204ENST00000423567 ENGASEQ8NFI3 743 aa11.78□□□□□ -0.52
USP49-204ENST00000423567 SMARCE1Q969G3 411 aa11.78□□□□□ -0.52
USP49-204ENST00000423567 GSDMAQ96QA5 445 aa11.78□□□□□ -0.52
USP49-204ENST00000423567 CGRRF1Q99675 332 aa11.78□□□□□ -0.52
USP49-204ENST00000423567 KCTD10Q9H3F6 313 aa11.78□□□□□ -0.52
USP49-204ENST00000423567 RTN4Q9NQC3 1192 aaKnown RBP11.78□□□□□ -0.52
USP49-204ENST00000423567 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.78□□□□□ -0.52
USP49-204ENST00000423567 NCOR1O75376 2440 aa11.77□□□□□ -0.52
USP49-204ENST00000423567 PDCD11Q14690 1871 aaKnown RBP11.77□□□□□ -0.53
USP49-204ENST00000423567 PHACTR2O75167 634 aa11.77□□□□□ -0.53
USP49-204ENST00000423567 OR4Q2P0C623 313 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms