RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 ZNF560Q96MR9 790 aa9.98□□□□□ -0.81
PDGFC-202ENST00000422544 TTPALQ9BTX7 342 aa9.98□□□□□ -0.81
PDGFC-202ENST00000422544 NAT10Q9H0A0 1025 aaKnown RBP9.98□□□□□ -0.81
PDGFC-202ENST00000422544 TMEM8AQ9HCN3 771 aa9.98□□□□□ -0.81
PDGFC-202ENST00000422544 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.98□□□□□ -0.81
PDGFC-202ENST00000422544 MRPL17Q9NRX2 175 aaKnown RBP9.98□□□□□ -0.81
PDGFC-202ENST00000422544 FANCLQ9NW38 375 aa9.98□□□□□ -0.81
PDGFC-202ENST00000422544 MAGEC2Q9UBF1 373 aaPredicted RBP9.98□□□□□ -0.81
PDGFC-202ENST00000422544 PCDHB8Q9UN66 801 aa9.98□□□□□ -0.81
PDGFC-202ENST00000422544 CITO14578 2027 aa9.98□□□□□ -0.81
PDGFC-202ENST00000422544 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.97□□□□□ -0.81
PDGFC-202ENST00000422544 SYN3O14994 580 aa9.97□□□□□ -0.81
PDGFC-202ENST00000422544 LRRN2O75325 713 aa9.97□□□□□ -0.81
PDGFC-202ENST00000422544 HLA-DRAP01903 254 aa9.97□□□□□ -0.81
PDGFC-202ENST00000422544 RPL17P18621 184 aaKnown RBP9.97□□□□□ -0.81
PDGFC-202ENST00000422544 PAX3P23760 479 aa9.97□□□□□ -0.81
PDGFC-202ENST00000422544 PIK3CAP42336 1068 aa9.97□□□□□ -0.81
PDGFC-202ENST00000422544 MTIF2P46199 727 aaKnown RBP9.97□□□□□ -0.81
PDGFC-202ENST00000422544 ZNF165P49910 485 aa9.97□□□□□ -0.81
PDGFC-202ENST00000422544 MXI1P50539 228 aa9.97□□□□□ -0.81
PDGFC-202ENST00000422544 KCNQ1P51787 676 aa9.97□□□□□ -0.81
PDGFC-202ENST00000422544 MYL5Q02045 173 aa9.97□□□□□ -0.81
PDGFC-202ENST00000422544 MYO1EQ12965 1108 aa9.97□□□□□ -0.81
PDGFC-202ENST00000422544 NCAPHQ15003 741 aa9.97□□□□□ -0.81
PDGFC-202ENST00000422544 CCDC85BQ15834 202 aaPredicted RBP9.97□□□□□ -0.81
PDGFC-202ENST00000422544 SGSM1Q2NKQ1 1148 aa9.97□□□□□ -0.81
PDGFC-202ENST00000422544 CBWD6Q4V339 395 aa9.97□□□□□ -0.81
PDGFC-202ENST00000422544 TCEAL5Q5H9L2 206 aa9.97□□□□□ -0.81
PDGFC-202ENST00000422544 CBWD3Q5JTY5 395 aa9.97□□□□□ -0.81
PDGFC-202ENST00000422544 CBWD5Q5RIA9 395 aa9.97□□□□□ -0.81
PDGFC-202ENST00000422544 VARS2Q5ST30 1063 aaKnown RBP9.97□□□□□ -0.81
PDGFC-202ENST00000422544 WSCD1Q658N2 575 aa9.97□□□□□ -0.81
PDGFC-202ENST00000422544 KRT39Q6A163 491 aa9.97□□□□□ -0.81
PDGFC-202ENST00000422544 FAM114A1Q8IWE2 563 aa9.97□□□□□ -0.81
PDGFC-202ENST00000422544 AOPEPQ8N6M6 819 aa9.97□□□□□ -0.81
PDGFC-202ENST00000422544 APPL2Q8NEU8 664 aa9.97□□□□□ -0.81
PDGFC-202ENST00000422544 LNX1Q8TBB1 728 aaPredicted RBP9.97□□□□□ -0.81
PDGFC-202ENST00000422544 TAS1R2Q8TE23 839 aa9.97□□□□□ -0.81
PDGFC-202ENST00000422544 SEMA4DQ92854 862 aa9.97□□□□□ -0.81
PDGFC-202ENST00000422544 PI4K2AQ9BTU6 479 aa9.97□□□□□ -0.81
PDGFC-202ENST00000422544 XYLT2Q9H1B5 865 aa9.97□□□□□ -0.81
PDGFC-202ENST00000422544 NSUN3Q9H649 340 aaKnown RBP9.97□□□□□ -0.81
PDGFC-202ENST00000422544 TLE6Q9H808 572 aa9.97□□□□□ -0.81
PDGFC-202ENST00000422544 THEGQ9P2T0 379 aa9.97□□□□□ -0.81
PDGFC-202ENST00000422544 SSX2IPQ9Y2D8 614 aa9.97□□□□□ -0.81
PDGFC-202ENST00000422544 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.97□□□□□ -0.81
PDGFC-202ENST00000422544 SNX9Q9Y5X1 595 aa9.97□□□□□ -0.81
PDGFC-202ENST00000422544 TDRD15B5MCY1 1934 aaKnown RBP9.96□□□□□ -0.81
PDGFC-202ENST00000422544 KCNJ18B7U540 433 aa9.96□□□□□ -0.82
PDGFC-202ENST00000422544 TEX28O15482 410 aa9.96□□□□□ -0.82
PDGFC-202ENST00000422544 CLSTN1O94985 981 aa9.96□□□□□ -0.82
PDGFC-202ENST00000422544 CNPP09543 421 aaKnown RBP9.96□□□□□ -0.82
PDGFC-202ENST00000422544 ODC1P11926 461 aa9.96□□□□□ -0.82
PDGFC-202ENST00000422544 TYMPP19971 482 aa9.96□□□□□ -0.82
PDGFC-202ENST00000422544 ATICP31939 592 aa9.96□□□□□ -0.82
PDGFC-202ENST00000422544 GTF2F1P35269 517 aaKnown RBP eCLIP9.96□□□□□ -0.82
PDGFC-202ENST00000422544 NRIP1P48552 1158 aa9.96□□□□□ -0.82
PDGFC-202ENST00000422544 FMO5P49326 533 aa9.96□□□□□ -0.82
PDGFC-202ENST00000422544 YWHAHQ04917 246 aaPredicted RBP9.96□□□□□ -0.82
PDGFC-202ENST00000422544 KCNH2Q12809 1159 aa9.96□□□□□ -0.82
PDGFC-202ENST00000422544 MRPL58Q14197 206 aaKnown RBP9.96□□□□□ -0.82
PDGFC-202ENST00000422544 KCNJ12Q14500 433 aa9.96□□□□□ -0.82
PDGFC-202ENST00000422544 ZNF699Q32M78 642 aa9.96□□□□□ -0.82
PDGFC-202ENST00000422544 WDR72Q3MJ13 1102 aa9.96□□□□□ -0.82
PDGFC-202ENST00000422544 TCP11X2Q5H9J9 407 aa9.96□□□□□ -0.82
PDGFC-202ENST00000422544 SPOPLQ6IQ16 392 aa9.96□□□□□ -0.82
PDGFC-202ENST00000422544 ANKS3Q6ZW76 656 aa9.96□□□□□ -0.82
PDGFC-202ENST00000422544 DHX40Q8IX18 779 aaKnown RBP9.96□□□□□ -0.82
PDGFC-202ENST00000422544 PIK3R5Q8WYR1 880 aa9.96□□□□□ -0.82
PDGFC-202ENST00000422544 KLHL5Q96PQ7 755 aa9.96□□□□□ -0.82
PDGFC-202ENST00000422544 BPIFA3Q9BQP9 254 aa9.96□□□□□ -0.82
PDGFC-202ENST00000422544 EMILIN2Q9BXX0 1053 aa9.96□□□□□ -0.82
PDGFC-202ENST00000422544 IGFLR1Q9H665 355 aa9.96□□□□□ -0.82
PDGFC-202ENST00000422544 RXFP1Q9HBX9 757 aa9.96□□□□□ -0.82
PDGFC-202ENST00000422544 CD320Q9NPF0 282 aa9.96□□□□□ -0.82
PDGFC-202ENST00000422544 RAB20Q9NX57 234 aa9.96□□□□□ -0.82
PDGFC-202ENST00000422544 GDAP2Q9NXN4 497 aa9.96□□□□□ -0.82
PDGFC-202ENST00000422544 NXF1Q9UBU9 619 aaKnown RBP9.96□□□□□ -0.82
PDGFC-202ENST00000422544 POLIQ9UNA4 740 aa9.96□□□□□ -0.82
PDGFC-202ENST00000422544 IRAK3Q9Y616 596 aa9.96□□□□□ -0.82
PDGFC-202ENST00000422544 ARHGEF37A1IGU5 675 aa9.95□□□□□ -0.82
PDGFC-202ENST00000422544 SMTNL1A8MU46 457 aa9.95□□□□□ -0.82
PDGFC-202ENST00000422544 ADAM12O43184 909 aa9.95□□□□□ -0.82
PDGFC-202ENST00000422544 HUS1O60921 280 aa9.95□□□□□ -0.82
PDGFC-202ENST00000422544 CLASP2O75122 1294 aaKnown RBP9.95□□□□□ -0.82
PDGFC-202ENST00000422544 OAZ2O95190 189 aa9.95□□□□□ -0.82
PDGFC-202ENST00000422544 STAU1O95793 577 aaKnown RBP9.95□□□□□ -0.82
PDGFC-202ENST00000422544 AFPP02771 609 aaKnown RBP9.95□□□□□ -0.82
PDGFC-202ENST00000422544 CYP11A1P05108 521 aa9.95□□□□□ -0.82
PDGFC-202ENST00000422544 KLRC2P26717 231 aa9.95□□□□□ -0.82
PDGFC-202ENST00000422544 ARPP19P56211 112 aa9.95□□□□□ -0.82
PDGFC-202ENST00000422544 TNNC1P63316 161 aa9.95□□□□□ -0.82
PDGFC-202ENST00000422544 MRPS5P82675 430 aaKnown RBP9.95□□□□□ -0.82
PDGFC-202ENST00000422544 HYAL1Q12794 435 aa9.95□□□□□ -0.82
PDGFC-202ENST00000422544 IQCB1Q15051 598 aa9.95□□□□□ -0.82
PDGFC-202ENST00000422544 PSMD5Q16401 504 aa9.95□□□□□ -0.82
PDGFC-202ENST00000422544 SOWAHAQ2M3V2 549 aa9.95□□□□□ -0.82
PDGFC-202ENST00000422544 CTXN3Q4LDR2 81 aa9.95□□□□□ -0.82
PDGFC-202ENST00000422544 CDKAL1Q5VV42 579 aa9.95□□□□□ -0.82
PDGFC-202ENST00000422544 OVOS1Q6IE37 1185 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms