RNA–Protein interactions for RNA: ENST00000421816.6

GCDH-202, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 1,109 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-202ENST00000421816 ZNF280DQ6N043 979 aa20.81■□□□□ 0.92
GCDH-202ENST00000421816 ANKRD54Q6NXT1 300 aa20.81■□□□□ 0.92
GCDH-202ENST00000421816 EP400NLQ6ZTU2 488 aa20.81■□□□□ 0.92
GCDH-202ENST00000421816 SV2AQ7L0J3 742 aa20.81■□□□□ 0.92
GCDH-202ENST00000421816 GLYCTKQ8IVS8 523 aa20.81■□□□□ 0.92
GCDH-202ENST00000421816 FBXL5Q9UKA1 691 aa20.81■□□□□ 0.92
GCDH-202ENST00000421816 DSEQ9UL01 958 aa20.81■□□□□ 0.92
GCDH-202ENST00000421816 CDY1Q9Y6F8 540 aa20.81■□□□□ 0.92
GCDH-202ENST00000421816 PRUNE2Q8WUY3 3088 aa20.81■□□□□ 0.92
GCDH-202ENST00000421816 TGM5O43548 720 aa20.8■□□□□ 0.92
GCDH-202ENST00000421816 PHACTR2O75167 634 aa20.8■□□□□ 0.92
GCDH-202ENST00000421816 GLUD1P00367 558 aa20.8■□□□□ 0.92
GCDH-202ENST00000421816 ATICP31939 592 aa20.8■□□□□ 0.92
GCDH-202ENST00000421816 GTF2H1P32780 548 aa20.8■□□□□ 0.92
GCDH-202ENST00000421816 OR1D2P34982 312 aa20.8■□□□□ 0.92
GCDH-202ENST00000421816 TFF2Q03403 129 aa20.8■□□□□ 0.92
GCDH-202ENST00000421816 BIRC3Q13489 604 aa20.8■□□□□ 0.92
GCDH-202ENST00000421816 TRPC3Q13507 836 aa20.8■□□□□ 0.92
GCDH-202ENST00000421816 OVOS1Q6IE37 1185 aa20.8■□□□□ 0.92
GCDH-202ENST00000421816 LIMS2Q7Z4I7 341 aa20.8■□□□□ 0.92
GCDH-202ENST00000421816 FRMD5Q7Z6J6 570 aa20.8■□□□□ 0.92
GCDH-202ENST00000421816 PALB2Q86YC2 1186 aa20.8■□□□□ 0.92
GCDH-202ENST00000421816 HDAC7Q8WUI4 952 aa20.8■□□□□ 0.92
GCDH-202ENST00000421816 ATXN2LQ8WWM7 1075 aaKnown RBP20.8■□□□□ 0.92
GCDH-202ENST00000421816 OXCT2Q9BYC2 517 aaPredicted RBP20.8■□□□□ 0.92
GCDH-202ENST00000421816 XYLT2Q9H1B5 865 aa20.8■□□□□ 0.92
GCDH-202ENST00000421816 METTL14Q9HCE5 456 aaKnown RBP20.8■□□□□ 0.92
GCDH-202ENST00000421816 DZANK1Q9NVP4 752 aa20.8■□□□□ 0.92
GCDH-202ENST00000421816 ARMCX3Q9UH62 379 aaPredicted RBP20.8■□□□□ 0.92
GCDH-202ENST00000421816 DACH1Q9UI36 760 aa20.8■□□□□ 0.92
GCDH-202ENST00000421816 H3BQ06 376 aaPredicted RBP20.79■□□□□ 0.92
GCDH-202ENST00000421816 HOXB8P17481 243 aaPredicted RBP20.79■□□□□ 0.92
GCDH-202ENST00000421816 ERCC5P28715 1186 aaPredicted RBP20.79■□□□□ 0.92
GCDH-202ENST00000421816 MYL6P60660 151 aa20.79■□□□□ 0.92
GCDH-202ENST00000421816 KLHL40Q2TBA0 621 aa20.79■□□□□ 0.92
GCDH-202ENST00000421816 CT47A1Q5JQC4 288 aaPredicted RBP20.79■□□□□ 0.92
GCDH-202ENST00000421816 WSCD1Q658N2 575 aa20.79■□□□□ 0.92
GCDH-202ENST00000421816 SYCE2Q6PIF2 218 aa20.79■□□□□ 0.92
GCDH-202ENST00000421816 TOP6BLQ8N6T0 577 aa20.79■□□□□ 0.92
GCDH-202ENST00000421816 SRRTQ9BXP5 876 aaKnown RBP20.79■□□□□ 0.92
GCDH-202ENST00000421816 VRTNQ9H8Y1 702 aa20.79■□□□□ 0.92
GCDH-202ENST00000421816 TMEM8AQ9HCN3 771 aa20.79■□□□□ 0.92
GCDH-202ENST00000421816 L1RE1Q9UN81 338 aa20.79■□□□□ 0.92
GCDH-202ENST00000421816 SNX9Q9Y5X1 595 aa20.79■□□□□ 0.92
GCDH-202ENST00000421816 STX10O60499 249 aa20.78■□□□□ 0.92
GCDH-202ENST00000421816 HUS1O60921 280 aa20.78■□□□□ 0.92
GCDH-202ENST00000421816 GCLMP48507 274 aa20.78■□□□□ 0.92
GCDH-202ENST00000421816 MARSP56192 900 aaKnown RBP20.78■□□□□ 0.92
GCDH-202ENST00000421816 ROR1Q01973 937 aa20.78■□□□□ 0.92
GCDH-202ENST00000421816 NCOA4Q13772 614 aa20.78■□□□□ 0.92
GCDH-202ENST00000421816 AAK1Q2M2I8 961 aa20.78■□□□□ 0.92
GCDH-202ENST00000421816 DPH6Q7L8W6 267 aa20.78■□□□□ 0.92
GCDH-202ENST00000421816 METTL23Q86XA0 190 aa20.78■□□□□ 0.92
GCDH-202ENST00000421816 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.78■□□□□ 0.92
GCDH-202ENST00000421816 PDCL2Q8N4E4 241 aa20.78■□□□□ 0.92
GCDH-202ENST00000421816 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.78■□□□□ 0.92
GCDH-202ENST00000421816 SPATA18Q8TC71 538 aa20.78■□□□□ 0.92
GCDH-202ENST00000421816 SLC35C1Q96A29 364 aa20.78■□□□□ 0.92
GCDH-202ENST00000421816 SYAP1Q96A49 352 aaPredicted RBP20.78■□□□□ 0.92
GCDH-202ENST00000421816 RTP3Q9BQQ7 232 aa20.78■□□□□ 0.92
GCDH-202ENST00000421816 PLEKHA4Q9H4M7 779 aa20.78■□□□□ 0.92
GCDH-202ENST00000421816 MAN1C1Q9NR34 630 aa20.78■□□□□ 0.92
GCDH-202ENST00000421816 DPP7Q9UHL4 492 aa20.78■□□□□ 0.92
GCDH-202ENST00000421816 CD207Q9UJ71 328 aa20.78■□□□□ 0.92
GCDH-202ENST00000421816 FBXW11Q9UKB1 542 aa20.78■□□□□ 0.92
GCDH-202ENST00000421816 OR6C75A6NL08 312 aa20.77■□□□□ 0.92
GCDH-202ENST00000421816 ABLIM3O94929 683 aa20.77■□□□□ 0.92
GCDH-202ENST00000421816 FGFR1OPO95684 399 aaKnown RBP20.77■□□□□ 0.92
GCDH-202ENST00000421816 GNA14O95837 355 aa20.77■□□□□ 0.92
GCDH-202ENST00000421816 MRPS5P82675 430 aaKnown RBP20.77■□□□□ 0.92
GCDH-202ENST00000421816 SOWAHAQ2M3V2 549 aa20.77■□□□□ 0.92
GCDH-202ENST00000421816 CAVIN1Q6NZI2 390 aaKnown RBP20.77■□□□□ 0.92
GCDH-202ENST00000421816 SASS6Q6UVJ0 657 aa20.77■□□□□ 0.92
GCDH-202ENST00000421816 TMEM86AQ8N2M4 240 aa20.77■□□□□ 0.92
GCDH-202ENST00000421816 SMRP1Q8NCR6 262 aa20.77■□□□□ 0.92
GCDH-202ENST00000421816 ZNF461Q8TAF7 563 aa20.77■□□□□ 0.92
GCDH-202ENST00000421816 S1PR5Q9H228 398 aa20.77■□□□□ 0.92
GCDH-202ENST00000421816 WDR27A2RRH5 827 aa20.76■□□□□ 0.91
GCDH-202ENST00000421816 PAPLNO95428 1278 aa20.76■□□□□ 0.91
GCDH-202ENST00000421816 HLA-DRAP01903 254 aa20.76■□□□□ 0.91
GCDH-202ENST00000421816 SPATA31D3P0C874 917 aa20.76■□□□□ 0.91
GCDH-202ENST00000421816 SGSM1Q2NKQ1 1148 aa20.76■□□□□ 0.91
GCDH-202ENST00000421816 WDR72Q3MJ13 1102 aa20.76■□□□□ 0.91
GCDH-202ENST00000421816 CCDC40Q4G0X9 1142 aa20.76■□□□□ 0.91
GCDH-202ENST00000421816 KRT39Q6A163 491 aa20.76■□□□□ 0.91
GCDH-202ENST00000421816 SPATA31D4Q6ZUB0 917 aa20.76■□□□□ 0.91
GCDH-202ENST00000421816 KREMEN2Q8NCW0 462 aa20.76■□□□□ 0.91
GCDH-202ENST00000421816 TAF4BQ92750 862 aa20.76■□□□□ 0.91
GCDH-202ENST00000421816 ASB2Q96Q27 587 aa20.76■□□□□ 0.91
GCDH-202ENST00000421816 SPTBN5Q9NRC6 3674 aaKnown RBP20.75■□□□□ 0.91
GCDH-202ENST00000421816 GABRDO14764 452 aa20.75■□□□□ 0.91
GCDH-202ENST00000421816 ASS1P00966 412 aaKnown RBP20.75■□□□□ 0.91
GCDH-202ENST00000421816 FAM163BP0C2L3 166 aa20.75■□□□□ 0.91
GCDH-202ENST00000421816 PIK3CAP42336 1068 aa20.75■□□□□ 0.91
GCDH-202ENST00000421816 MXI1P50539 228 aa20.75■□□□□ 0.91
GCDH-202ENST00000421816 SMAD4Q13485 552 aaKnown RBP20.75■□□□□ 0.91
GCDH-202ENST00000421816 CLUL1Q15846 466 aa20.75■□□□□ 0.91
GCDH-202ENST00000421816 ZNF699Q32M78 642 aa20.75■□□□□ 0.91
GCDH-202ENST00000421816 PUS10Q3MIT2 529 aaKnown RBP20.75■□□□□ 0.91
GCDH-202ENST00000421816 DCAF17Q5H9S7 520 aaPredicted RBP20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms