RNA–Protein interactions for RNA: ENST00000421601.2

LINC00443-201, long intergenic non-protein coding RNA 443, humanhuman

TSL 3 BASIC

Gene LINC00443, Length 1,170 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00443-201ENST00000421601 VWCEQ96DN2 955 aa12.78□□□□□ -0.36
LINC00443-201ENST00000421601 MMS19Q96T76 1030 aa12.78□□□□□ -0.36
LINC00443-201ENST00000421601 CYP3A43Q9HB55 503 aa12.78□□□□□ -0.36
LINC00443-201ENST00000421601 LRFN2Q9ULH4 789 aa12.78□□□□□ -0.36
LINC00443-201ENST00000421601 REXO2Q9Y3B8 237 aaKnown RBP12.78□□□□□ -0.36
LINC00443-201ENST00000421601 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.78□□□□□ -0.36
LINC00443-201ENST00000421601 DNAH12Q6ZR08 3092 aa12.77□□□□□ -0.37
LINC00443-201ENST00000421601 RALGAPA2Q2PPJ7 1873 aa12.77□□□□□ -0.37
LINC00443-201ENST00000421601 A0A087X0T9 212 aa12.77□□□□□ -0.37
LINC00443-201ENST00000421601 KPNA7A9QM74 516 aa12.77□□□□□ -0.37
LINC00443-201ENST00000421601 DDX3XO00571 662 aaKnown RBP eCLIP12.77□□□□□ -0.37
LINC00443-201ENST00000421601 SPTLC1O15269 473 aa12.77□□□□□ -0.37
LINC00443-201ENST00000421601 CCP110O43303 1012 aa12.77□□□□□ -0.37
LINC00443-201ENST00000421601 ZNF500O60304 480 aaPredicted RBP12.77□□□□□ -0.37
LINC00443-201ENST00000421601 IPO7O95373 1038 aaKnown RBP12.77□□□□□ -0.37
LINC00443-201ENST00000421601 FAM228BP0C875 321 aa12.77□□□□□ -0.37
LINC00443-201ENST00000421601 CYP11B1P15538 503 aa12.77□□□□□ -0.37
LINC00443-201ENST00000421601 CHRNB2P17787 502 aa12.77□□□□□ -0.37
LINC00443-201ENST00000421601 IGFBP6P24592 240 aaPredicted RBP12.77□□□□□ -0.37
LINC00443-201ENST00000421601 ANXA13P27216 316 aa12.77□□□□□ -0.37
LINC00443-201ENST00000421601 PNPLA4P41247 253 aa12.77□□□□□ -0.37
LINC00443-201ENST00000421601 MAGEA1P43355 309 aa12.77□□□□□ -0.37
LINC00443-201ENST00000421601 TAF6P49848 677 aa12.77□□□□□ -0.37
LINC00443-201ENST00000421601 CLCNKBP51801 687 aa12.77□□□□□ -0.37
LINC00443-201ENST00000421601 GRIK3Q13003 919 aa12.77□□□□□ -0.37
LINC00443-201ENST00000421601 IKBKEQ14164 716 aa12.77□□□□□ -0.37
LINC00443-201ENST00000421601 SLC18A3Q16572 532 aa12.77□□□□□ -0.37
LINC00443-201ENST00000421601 NOMO2Q5JPE7 1267 aa12.77□□□□□ -0.37
LINC00443-201ENST00000421601 TAF3Q5VWG9 929 aa12.77□□□□□ -0.37
LINC00443-201ENST00000421601 CNKSR3Q6P9H4 555 aa12.77□□□□□ -0.37
LINC00443-201ENST00000421601 VPS36Q86VN1 386 aa12.77□□□□□ -0.37
LINC00443-201ENST00000421601 RPUSD2Q8IZ73 545 aaKnown RBP12.77□□□□□ -0.37
LINC00443-201ENST00000421601 RBBP8NLQ8NC74 664 aaPredicted RBP12.77□□□□□ -0.37
LINC00443-201ENST00000421601 SLC30A5Q8TAD4 765 aa12.77□□□□□ -0.37
LINC00443-201ENST00000421601 ZNF560Q96MR9 790 aa12.77□□□□□ -0.37
LINC00443-201ENST00000421601 SYT11Q9BT88 431 aa12.77□□□□□ -0.37
LINC00443-201ENST00000421601 OCEL1Q9H607 264 aa12.77□□□□□ -0.37
LINC00443-201ENST00000421601 SMYD3Q9H7B4 428 aa12.77□□□□□ -0.37
LINC00443-201ENST00000421601 CACNG4Q9UBN1 327 aa12.77□□□□□ -0.37
LINC00443-201ENST00000421601 NOCTQ9UK39 431 aaKnown RBP12.77□□□□□ -0.37
LINC00443-201ENST00000421601 PCDHA13Q9Y5I0 950 aa12.77□□□□□ -0.37
LINC00443-201ENST00000421601 SNX9Q9Y5X1 595 aa12.77□□□□□ -0.37
LINC00443-201ENST00000421601 SCN5AQ14524 2016 aa12.76□□□□□ -0.37
LINC00443-201ENST00000421601 A0A0U1RQJ8 604 aa12.76□□□□□ -0.37
LINC00443-201ENST00000421601 CASTOR2A6NHX0 329 aa12.76□□□□□ -0.37
LINC00443-201ENST00000421601 PODXLO00592 558 aa12.76□□□□□ -0.37
LINC00443-201ENST00000421601 CSF2RAP15509 400 aa12.76□□□□□ -0.37
LINC00443-201ENST00000421601 ZNF132P52740 706 aa12.76□□□□□ -0.37
LINC00443-201ENST00000421601 EMP3P54852 163 aa12.76□□□□□ -0.37
LINC00443-201ENST00000421601 LILRA4P59901 499 aa12.76□□□□□ -0.37
LINC00443-201ENST00000421601 TUSC3Q13454 348 aa12.76□□□□□ -0.37
LINC00443-201ENST00000421601 BMS1Q14692 1282 aaKnown RBP12.76□□□□□ -0.37
LINC00443-201ENST00000421601 UPP1Q16831 310 aa12.76□□□□□ -0.37
LINC00443-201ENST00000421601 SV2CQ496J9 727 aa12.76□□□□□ -0.37
LINC00443-201ENST00000421601 ZNF394Q53GI3 561 aa12.76□□□□□ -0.37
LINC00443-201ENST00000421601 CCDC122Q5T0U0 273 aa12.76□□□□□ -0.37
LINC00443-201ENST00000421601 SMYD5Q6GMV2 418 aa12.76□□□□□ -0.37
LINC00443-201ENST00000421601 MFSD5Q6N075 450 aa12.76□□□□□ -0.37
LINC00443-201ENST00000421601 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.76□□□□□ -0.37
LINC00443-201ENST00000421601 GLYCTKQ8IVS8 523 aa12.76□□□□□ -0.37
LINC00443-201ENST00000421601 TMEM199Q8N511 208 aa12.76□□□□□ -0.37
LINC00443-201ENST00000421601 OLIG1Q8TAK6 271 aa12.76□□□□□ -0.37
LINC00443-201ENST00000421601 LNX1Q8TBB1 728 aaPredicted RBP12.76□□□□□ -0.37
LINC00443-201ENST00000421601 URGCPQ8TCY9 931 aa12.76□□□□□ -0.37
LINC00443-201ENST00000421601 EPS8L1Q8TE68 723 aa12.76□□□□□ -0.37
LINC00443-201ENST00000421601 ATRIPQ8WXE1 791 aa12.76□□□□□ -0.37
LINC00443-201ENST00000421601 RABGGTAQ92696 567 aa12.76□□□□□ -0.37
LINC00443-201ENST00000421601 DDX27Q96GQ7 796 aaKnown RBP12.76□□□□□ -0.37
LINC00443-201ENST00000421601 PPP1R13BQ96KQ4 1090 aa12.76□□□□□ -0.37
LINC00443-201ENST00000421601 SEPT11Q9NVA2 429 aaKnown RBP12.76□□□□□ -0.37
LINC00443-201ENST00000421601 GDAP2Q9NXN4 497 aa12.76□□□□□ -0.37
LINC00443-201ENST00000421601 KANSL3Q9P2N6 904 aa12.76□□□□□ -0.37
LINC00443-201ENST00000421601 DDHD2O94830 711 aa12.75□□□□□ -0.37
LINC00443-201ENST00000421601 MMEP08473 750 aa12.75□□□□□ -0.37
LINC00443-201ENST00000421601 GATMP50440 423 aa12.75□□□□□ -0.37
LINC00443-201ENST00000421601 PDE6CP51160 858 aa12.75□□□□□ -0.37
LINC00443-201ENST00000421601 RAD23BP54727 409 aa12.75□□□□□ -0.37
LINC00443-201ENST00000421601 CDR2Q01850 454 aa12.75□□□□□ -0.37
LINC00443-201ENST00000421601 PDCD11Q14690 1871 aaKnown RBP12.75□□□□□ -0.37
LINC00443-201ENST00000421601 SOWAHAQ2M3V2 549 aa12.75□□□□□ -0.37
LINC00443-201ENST00000421601 ALKBH5Q6P6C2 394 aaKnown RBP12.75□□□□□ -0.37
LINC00443-201ENST00000421601 KIAA1328Q86T90 577 aa12.75□□□□□ -0.37
LINC00443-201ENST00000421601 ZNF280BQ86YH2 543 aa12.75□□□□□ -0.37
LINC00443-201ENST00000421601 CRIPAKQ8N1N5 446 aa12.75□□□□□ -0.37
LINC00443-201ENST00000421601 TET1Q8NFU7 2136 aa12.75□□□□□ -0.37
LINC00443-201ENST00000421601 WHAMMQ8TF30 809 aa12.75□□□□□ -0.37
LINC00443-201ENST00000421601 DDX1Q92499 740 aaKnown RBP12.75□□□□□ -0.37
LINC00443-201ENST00000421601 CASD1Q96PB1 797 aa12.75□□□□□ -0.37
LINC00443-201ENST00000421601 HS3ST6Q96QI5 342 aa12.75□□□□□ -0.37
LINC00443-201ENST00000421601 PCDHB18PQ96TA0 734 aa12.75□□□□□ -0.37
LINC00443-201ENST00000421601 MRPL45Q9BRJ2 306 aaKnown RBP12.75□□□□□ -0.37
LINC00443-201ENST00000421601 PAAF1Q9BRP4 392 aa12.75□□□□□ -0.37
LINC00443-201ENST00000421601 ELOVL4Q9GZR5 314 aa12.75□□□□□ -0.37
LINC00443-201ENST00000421601 PUF60Q9UHX1 559 aaKnown RBP12.75□□□□□ -0.37
LINC00443-201ENST00000421601 NAGPAQ9UK23 515 aa12.75□□□□□ -0.37
LINC00443-201ENST00000421601 TFR2Q9UP52 801 aa12.75□□□□□ -0.37
LINC00443-201ENST00000421601 ABHD14A-ACY1A0A1B0GW23 586 aa12.74□□□□□ -0.37
LINC00443-201ENST00000421601 RCCD1A6NED2 376 aa12.74□□□□□ -0.37
LINC00443-201ENST00000421601 CYB561D2O14569 222 aa12.74□□□□□ -0.37
LINC00443-201ENST00000421601 CILPO75339 1184 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms