RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 ASS1P00966 412 aaKnown RBP11.62□□□□□ -0.55
DDX56-203ENST00000421223 CYP1A1P04798 512 aaPredicted RBP11.62□□□□□ -0.55
DDX56-203ENST00000421223 LSP1P33241 339 aa11.62□□□□□ -0.55
DDX56-203ENST00000421223 TFDP1Q14186 410 aa11.62□□□□□ -0.55
DDX56-203ENST00000421223 SGSM1Q2NKQ1 1148 aa11.62□□□□□ -0.55
DDX56-203ENST00000421223 SMTNL2Q2TAL5 461 aa11.62□□□□□ -0.55
DDX56-203ENST00000421223 CAPN12Q6ZSI9 719 aa11.62□□□□□ -0.55
DDX56-203ENST00000421223 ZNF365Q70YC5 407 aa11.62□□□□□ -0.55
DDX56-203ENST00000421223 ERICH1Q86X53 443 aa11.62□□□□□ -0.55
DDX56-203ENST00000421223 TRIM11Q96F44 468 aa11.62□□□□□ -0.55
DDX56-203ENST00000421223 FAM81BQ96LP2 452 aa11.62□□□□□ -0.55
DDX56-203ENST00000421223 NIF3L1Q9GZT8 377 aa11.62□□□□□ -0.55
DDX56-203ENST00000421223 ZWILCHQ9H900 591 aa11.62□□□□□ -0.55
DDX56-203ENST00000421223 NFS1Q9Y697 457 aa11.62□□□□□ -0.55
DDX56-203ENST00000421223 MCM3APO60318 1980 aa11.62□□□□□ -0.55
DDX56-203ENST00000421223 GPR25O00155 361 aa11.62□□□□□ -0.55
DDX56-203ENST00000421223 IFNB1P01574 187 aa11.62□□□□□ -0.55
DDX56-203ENST00000421223 PIGRP01833 764 aa11.62□□□□□ -0.55
DDX56-203ENST00000421223 ITGB3P05106 788 aa11.62□□□□□ -0.55
DDX56-203ENST00000421223 NFICP08651 508 aa11.62□□□□□ -0.55
DDX56-203ENST00000421223 ADORA2AP29274 412 aa11.62□□□□□ -0.55
DDX56-203ENST00000421223 CLDN10P78369 228 aa11.62□□□□□ -0.55
DDX56-203ENST00000421223 MTM1Q13496 603 aa11.62□□□□□ -0.55
DDX56-203ENST00000421223 CLUL1Q15846 466 aa11.62□□□□□ -0.55
DDX56-203ENST00000421223 KCNT1Q5JUK3 1230 aa11.62□□□□□ -0.55
DDX56-203ENST00000421223 MPZL3Q6UWV2 235 aa11.62□□□□□ -0.55
DDX56-203ENST00000421223 ZNF677Q86XU0 584 aa11.62□□□□□ -0.55
DDX56-203ENST00000421223 WDR49Q8IV35 697 aa11.62□□□□□ -0.55
DDX56-203ENST00000421223 RHOT1Q8IXI2 618 aa11.62□□□□□ -0.55
DDX56-203ENST00000421223 FEZF2Q8TBJ5 459 aa11.62□□□□□ -0.55
DDX56-203ENST00000421223 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.62□□□□□ -0.55
DDX56-203ENST00000421223 MRRFQ96E11 262 aaKnown RBP11.62□□□□□ -0.55
DDX56-203ENST00000421223 DDX23Q9BUQ8 820 aaKnown RBP11.62□□□□□ -0.55
DDX56-203ENST00000421223 TSPYL1Q9H0U9 437 aa11.62□□□□□ -0.55
DDX56-203ENST00000421223 DNAH12Q6ZR08 3092 aa11.61□□□□□ -0.55
DDX56-203ENST00000421223 FOXO6A8MYZ6 492 aa11.61□□□□□ -0.55
DDX56-203ENST00000421223 KRT1P04264 644 aa11.61□□□□□ -0.55
DDX56-203ENST00000421223 IBSPP21815 317 aaPredicted RBP11.61□□□□□ -0.55
DDX56-203ENST00000421223 PPIL2Q13356 520 aa11.61□□□□□ -0.55
DDX56-203ENST00000421223 TAX1BP1Q86VP1 789 aa11.61□□□□□ -0.55
DDX56-203ENST00000421223 EMC1Q8N766 993 aa11.61□□□□□ -0.55
DDX56-203ENST00000421223 EPS8L3Q8TE67 593 aaKnown RBP11.61□□□□□ -0.55
DDX56-203ENST00000421223 OSBPL8Q9BZF1 889 aa11.61□□□□□ -0.55
DDX56-203ENST00000421223 CDT1Q9H211 546 aa11.61□□□□□ -0.55
DDX56-203ENST00000421223 C10orf88Q9H8K7 445 aa11.61□□□□□ -0.55
DDX56-203ENST00000421223 PARVAQ9NVD7 372 aa11.61□□□□□ -0.55
DDX56-203ENST00000421223 ERAP1Q9NZ08 941 aa11.61□□□□□ -0.55
DDX56-203ENST00000421223 PCYOX1Q9UHG3 505 aa11.61□□□□□ -0.55
DDX56-203ENST00000421223 ZNF148Q9UQR1 794 aa11.61□□□□□ -0.55
DDX56-203ENST00000421223 CEP83Q9Y592 693 aa11.61□□□□□ -0.55
DDX56-203ENST00000421223 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.61□□□□□ -0.55
DDX56-203ENST00000421223 LRRD1A4D1F6 860 aa11.61□□□□□ -0.55
DDX56-203ENST00000421223 ACKR2O00590 384 aa11.61□□□□□ -0.55
DDX56-203ENST00000421223 GRIN2DO15399 1336 aa11.61□□□□□ -0.55
DDX56-203ENST00000421223 HBP1O60381 514 aa11.61□□□□□ -0.55
DDX56-203ENST00000421223 MYBL1P10243 752 aa11.61□□□□□ -0.55
DDX56-203ENST00000421223 MDH1P40925 334 aaKnown RBP11.61□□□□□ -0.55
DDX56-203ENST00000421223 SLC20A2Q08357 652 aa11.61□□□□□ -0.55
DDX56-203ENST00000421223 ADCY2Q08462 1091 aa11.61□□□□□ -0.55
DDX56-203ENST00000421223 SNAPC2Q13487 334 aa11.61□□□□□ -0.55
DDX56-203ENST00000421223 SIX1Q15475 284 aaPredicted RBP11.61□□□□□ -0.55
DDX56-203ENST00000421223 ZNF667Q5HYK9 610 aa11.61□□□□□ -0.55
DDX56-203ENST00000421223 TXNRD3NBQ6F5E7 133 aa11.61□□□□□ -0.55
DDX56-203ENST00000421223 ANKS1BQ7Z6G8 1248 aa11.61□□□□□ -0.55
DDX56-203ENST00000421223 TMEM35BQ8NCS4 154 aa11.61□□□□□ -0.55
DDX56-203ENST00000421223 DDX27Q96GQ7 796 aaKnown RBP11.61□□□□□ -0.55
DDX56-203ENST00000421223 PABPC3Q9H361 631 aaKnown RBP11.61□□□□□ -0.55
DDX56-203ENST00000421223 SAE1Q9UBE0 346 aaPredicted RBP11.61□□□□□ -0.55
DDX56-203ENST00000421223 PCSK1NQ9UHG2 260 aa11.61□□□□□ -0.55
DDX56-203ENST00000421223 CPSF3Q9UKF6 684 aaKnown RBP11.61□□□□□ -0.55
DDX56-203ENST00000421223 LACTBL1A8MY62 500 aa11.6□□□□□ -0.55
DDX56-203ENST00000421223 PDHXO00330 501 aa11.6□□□□□ -0.55
DDX56-203ENST00000421223 RGS16O15492 202 aaPredicted RBP11.6□□□□□ -0.55
DDX56-203ENST00000421223 GAS8O95995 478 aa11.6□□□□□ -0.55
DDX56-203ENST00000421223 STAG3L1P0CL83 205 aa11.6□□□□□ -0.55
DDX56-203ENST00000421223 IFI35P80217 286 aaPredicted RBP11.6□□□□□ -0.55
DDX56-203ENST00000421223 GPR162Q16538 588 aa11.6□□□□□ -0.55
DDX56-203ENST00000421223 DENND1BQ6P3S1 775 aa11.6□□□□□ -0.55
DDX56-203ENST00000421223 CCDC62Q6P9F0 684 aa11.6□□□□□ -0.55
DDX56-203ENST00000421223 LRIG3Q6UXM1 1119 aa11.6□□□□□ -0.55
DDX56-203ENST00000421223 KDM7AQ6ZMT4 941 aa11.6□□□□□ -0.55
DDX56-203ENST00000421223 CD302Q8IX05 232 aa11.6□□□□□ -0.55
DDX56-203ENST00000421223 GPRC5AQ8NFJ5 357 aa11.6□□□□□ -0.55
DDX56-203ENST00000421223 MGARPQ8TDB4 240 aa11.6□□□□□ -0.55
DDX56-203ENST00000421223 APOL6Q9BWW8 343 aa11.6□□□□□ -0.55
DDX56-203ENST00000421223 C2orf40Q9H1Z8 148 aa11.6□□□□□ -0.55
DDX56-203ENST00000421223 AVENQ9NQS1 362 aaPredicted RBP11.6□□□□□ -0.55
DDX56-203ENST00000421223 TBK1Q9UHD2 729 aa11.6□□□□□ -0.55
DDX56-203ENST00000421223 WDR81Q562E7 1941 aa11.6□□□□□ -0.55
DDX56-203ENST00000421223 EVPLQ92817 2033 aa11.6□□□□□ -0.55
DDX56-203ENST00000421223 FSCN2O14926 492 aa11.6□□□□□ -0.55
DDX56-203ENST00000421223 PPFIA2O75334 1257 aa11.6□□□□□ -0.55
DDX56-203ENST00000421223 LGALS2P05162 132 aa11.6□□□□□ -0.55
DDX56-203ENST00000421223 HOXC6P09630 235 aa11.6□□□□□ -0.55
DDX56-203ENST00000421223 ATF2P15336 505 aa11.6□□□□□ -0.55
DDX56-203ENST00000421223 CHKAP35790 457 aa11.6□□□□□ -0.55
DDX56-203ENST00000421223 CETN2P41208 172 aa11.6□□□□□ -0.55
DDX56-203ENST00000421223 IFNAR2P48551 515 aa11.6□□□□□ -0.55
DDX56-203ENST00000421223 ITGA8P53708 1063 aa11.6□□□□□ -0.55
DDX56-203ENST00000421223 KYNUQ16719 465 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms