RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 C8orf33Q9H7E9 229 aaPredicted RBP18.34■□□□□ 0.53
UPF3AP3-201ENST00000420996 LARSQ9P2J5 1176 aaKnown RBP18.34■□□□□ 0.53
UPF3AP3-201ENST00000420996 ASB3Q9Y575 518 aa18.34■□□□□ 0.53
UPF3AP3-201ENST00000420996 LACTBL1A8MY62 500 aa18.33■□□□□ 0.52
UPF3AP3-201ENST00000420996 LRP3O75074 770 aa18.33■□□□□ 0.52
UPF3AP3-201ENST00000420996 TYMPP19971 482 aa18.33■□□□□ 0.52
UPF3AP3-201ENST00000420996 KPNA1P52294 538 aaPredicted RBP18.33■□□□□ 0.52
UPF3AP3-201ENST00000420996 SLC12A3P55017 1021 aa18.33■□□□□ 0.52
UPF3AP3-201ENST00000420996 NCKAP1LP55160 1127 aa18.33■□□□□ 0.52
UPF3AP3-201ENST00000420996 ATP2C1P98194 919 aaPredicted RBP18.33■□□□□ 0.52
UPF3AP3-201ENST00000420996 SATB1Q01826 763 aa18.33■□□□□ 0.52
UPF3AP3-201ENST00000420996 PPP2R3AQ06190 1150 aa18.33■□□□□ 0.52
UPF3AP3-201ENST00000420996 SPEM2Q0P670 501 aa18.33■□□□□ 0.52
UPF3AP3-201ENST00000420996 MYBPC2Q14324 1141 aa18.33■□□□□ 0.52
UPF3AP3-201ENST00000420996 LRRC32Q14392 662 aa18.33■□□□□ 0.52
UPF3AP3-201ENST00000420996 GAS6Q14393 721 aa18.33■□□□□ 0.52
UPF3AP3-201ENST00000420996 LPAL2Q16609 132 aa18.33■□□□□ 0.52
UPF3AP3-201ENST00000420996 CENPPQ6IPU0 288 aa18.33■□□□□ 0.52
UPF3AP3-201ENST00000420996 BICD1Q96G01 975 aa18.33■□□□□ 0.52
UPF3AP3-201ENST00000420996 NCOR2Q9Y618 2525 aa18.33■□□□□ 0.52
UPF3AP3-201ENST00000420996 NUP210Q8TEM1 1887 aaPredicted RBP18.33■□□□□ 0.52
UPF3AP3-201ENST00000420996 RALGAPA1Q6GYQ0 2036 aa18.32■□□□□ 0.52
UPF3AP3-201ENST00000420996 ADRB2P07550 413 aa18.32■□□□□ 0.52
UPF3AP3-201ENST00000420996 RETP07949 1114 aa18.32■□□□□ 0.52
UPF3AP3-201ENST00000420996 PLA2G4BP0C869 781 aa18.32■□□□□ 0.52
UPF3AP3-201ENST00000420996 PAX3P23760 479 aa18.32■□□□□ 0.52
UPF3AP3-201ENST00000420996 TNFSF9P41273 254 aa18.32■□□□□ 0.52
UPF3AP3-201ENST00000420996 RILPL1Q5EBL4 403 aa18.32■□□□□ 0.52
UPF3AP3-201ENST00000420996 OVOS1Q6IE37 1185 aa18.32■□□□□ 0.52
UPF3AP3-201ENST00000420996 HAUS6Q7Z4H7 955 aa18.32■□□□□ 0.52
UPF3AP3-201ENST00000420996 ARID3BQ8IVW6 561 aaPredicted RBP18.32■□□□□ 0.52
UPF3AP3-201ENST00000420996 CDK5RAP3Q96JB5 506 aa18.32■□□□□ 0.52
UPF3AP3-201ENST00000420996 PLIN2Q99541 437 aa18.32■□□□□ 0.52
UPF3AP3-201ENST00000420996 HSFX1Q9UBD0 423 aa18.32■□□□□ 0.52
UPF3AP3-201ENST00000420996 SLC27A5Q9Y2P5 690 aa18.32■□□□□ 0.52
UPF3AP3-201ENST00000420996 ANK1P16157 1881 aa18.32■□□□□ 0.52
UPF3AP3-201ENST00000420996 MYBPHLA2RUH7 354 aa18.31■□□□□ 0.52
UPF3AP3-201ENST00000420996 DCDC2BA2VCK2 349 aa18.31■□□□□ 0.52
UPF3AP3-201ENST00000420996 MTMR11A4FU01 709 aa18.31■□□□□ 0.52
UPF3AP3-201ENST00000420996 SLC38A8A6NNN8 435 aa18.31■□□□□ 0.52
UPF3AP3-201ENST00000420996 OGTO15294 1046 aa18.31■□□□□ 0.52
UPF3AP3-201ENST00000420996 PAPSS2O95340 614 aaPredicted RBP18.31■□□□□ 0.52
UPF3AP3-201ENST00000420996 FGF19O95750 216 aa18.31■□□□□ 0.52
UPF3AP3-201ENST00000420996 SCP2P22307 547 aa18.31■□□□□ 0.52
UPF3AP3-201ENST00000420996 CNR2P34972 360 aa18.31■□□□□ 0.52
UPF3AP3-201ENST00000420996 LIG4P49917 911 aa18.31■□□□□ 0.52
UPF3AP3-201ENST00000420996 GUCY2FP51841 1108 aa18.31■□□□□ 0.52
UPF3AP3-201ENST00000420996 LILRA4P59901 499 aa18.31■□□□□ 0.52
UPF3AP3-201ENST00000420996 ENOX2Q16206 610 aaKnown RBP18.31■□□□□ 0.52
UPF3AP3-201ENST00000420996 ARSHQ5FYA8 562 aa18.31■□□□□ 0.52
UPF3AP3-201ENST00000420996 STXBP5Q5T5C0 1151 aa18.31■□□□□ 0.52
UPF3AP3-201ENST00000420996 SPATA1Q5VX52 437 aa18.31■□□□□ 0.52
UPF3AP3-201ENST00000420996 PRR23BQ6ZRT6 265 aa18.31■□□□□ 0.52
UPF3AP3-201ENST00000420996 GAREM2Q75VX8 874 aa18.31■□□□□ 0.52
UPF3AP3-201ENST00000420996 DNAJB7Q7Z6W7 309 aaPredicted RBP18.31■□□□□ 0.52
UPF3AP3-201ENST00000420996 RALGPS2Q86X27 583 aaPredicted RBP18.31■□□□□ 0.52
UPF3AP3-201ENST00000420996 ATAD1Q8NBU5 361 aa18.31■□□□□ 0.52
UPF3AP3-201ENST00000420996 PSMG2Q969U7 264 aa18.31■□□□□ 0.52
UPF3AP3-201ENST00000420996 CNTNAP3BQ96NU0 1288 aa18.31■□□□□ 0.52
UPF3AP3-201ENST00000420996 MKNK1Q9BUB5 465 aa18.31■□□□□ 0.52
UPF3AP3-201ENST00000420996 CNTNAP3Q9BZ76 1288 aa18.31■□□□□ 0.52
UPF3AP3-201ENST00000420996 RPF1Q9H9Y2 349 aaKnown RBP18.31■□□□□ 0.52
UPF3AP3-201ENST00000420996 OBP2AQ9NY56 170 aa18.31■□□□□ 0.52
UPF3AP3-201ENST00000420996 NPHP3-ACAD11A0A0J9YXS1 232 aa18.3■□□□□ 0.52
UPF3AP3-201ENST00000420996 CHURC1-FNTBB4DL54 471 aa18.3■□□□□ 0.52
UPF3AP3-201ENST00000420996 SPECC1L-ADORA2AF8WAN1 911 aa18.3■□□□□ 0.52
UPF3AP3-201ENST00000420996 DPYSL4O14531 572 aa18.3■□□□□ 0.52
UPF3AP3-201ENST00000420996 HRO43593 1189 aa18.3■□□□□ 0.52
UPF3AP3-201ENST00000420996 FAM189A1O60320 539 aa18.3■□□□□ 0.52
UPF3AP3-201ENST00000420996 CTHP32929 405 aa18.3■□□□□ 0.52
UPF3AP3-201ENST00000420996 SOX9P48436 509 aa18.3■□□□□ 0.52
UPF3AP3-201ENST00000420996 FNTBP49356 437 aa18.3■□□□□ 0.52
UPF3AP3-201ENST00000420996 SIM2Q14190 667 aaPredicted RBP18.3■□□□□ 0.52
UPF3AP3-201ENST00000420996 TMEM119Q4V9L6 283 aa18.3■□□□□ 0.52
UPF3AP3-201ENST00000420996 ARHGAP29Q52LW3 1261 aa18.3■□□□□ 0.52
UPF3AP3-201ENST00000420996 DGKKQ5KSL6 1271 aa18.3■□□□□ 0.52
UPF3AP3-201ENST00000420996 ARMCX5Q6P1M9 558 aa18.3■□□□□ 0.52
UPF3AP3-201ENST00000420996 ITIH5Q86UX2 942 aa18.3■□□□□ 0.52
UPF3AP3-201ENST00000420996 GPIHBP1Q8IV16 184 aa18.3■□□□□ 0.52
UPF3AP3-201ENST00000420996 SENP8Q96LD8 212 aa18.3■□□□□ 0.52
UPF3AP3-201ENST00000420996 LRRC3BQ96PB8 259 aa18.3■□□□□ 0.52
UPF3AP3-201ENST00000420996 KIF2CQ99661 725 aa18.3■□□□□ 0.52
UPF3AP3-201ENST00000420996 ATXN3LQ9H3M9 355 aa18.3■□□□□ 0.52
UPF3AP3-201ENST00000420996 RBM12Q9NTZ6 932 aaKnown RBP18.3■□□□□ 0.52
UPF3AP3-201ENST00000420996 ODF2LQ9ULJ1 636 aa18.3■□□□□ 0.52
UPF3AP3-201ENST00000420996 TBX20Q9UMR3 447 aa18.3■□□□□ 0.52
UPF3AP3-201ENST00000420996 KIF3AQ9Y496 699 aa18.3■□□□□ 0.52
UPF3AP3-201ENST00000420996 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.3■□□□□ 0.52
UPF3AP3-201ENST00000420996 VWA3AA6NCI4 1184 aa18.29■□□□□ 0.52
UPF3AP3-201ENST00000420996 K7ESF4 209 aa18.29■□□□□ 0.52
UPF3AP3-201ENST00000420996 PPEF2O14830 753 aa18.29■□□□□ 0.52
UPF3AP3-201ENST00000420996 HNRNPDLO14979 420 aaKnown RBP18.29■□□□□ 0.52
UPF3AP3-201ENST00000420996 PIGRP01833 764 aa18.29■□□□□ 0.52
UPF3AP3-201ENST00000420996 ODC1P11926 461 aa18.29■□□□□ 0.52
UPF3AP3-201ENST00000420996 GABRR2P28476 465 aa18.29■□□□□ 0.52
UPF3AP3-201ENST00000420996 WEE1P30291 646 aa18.29■□□□□ 0.52
UPF3AP3-201ENST00000420996 CACNB1Q02641 598 aaPredicted RBP18.29■□□□□ 0.52
UPF3AP3-201ENST00000420996 DMWDQ09019 674 aa18.29■□□□□ 0.52
UPF3AP3-201ENST00000420996 ARHGAP15Q53QZ3 475 aa18.29■□□□□ 0.52
UPF3AP3-201ENST00000420996 WDR44Q5JSH3 913 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms