RNA–Protein interactions for RNA: ENST00000420995.6

TRIM13-204, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-204ENST00000420995 HLA-DRAP01903 254 aa16.8■□□□□ 0.28
TRIM13-204ENST00000420995 TNNI1P19237 187 aa16.8■□□□□ 0.28
TRIM13-204ENST00000420995 LIN9Q5TKA1 542 aa16.8■□□□□ 0.28
TRIM13-204ENST00000420995 TDRD10Q5VZ19 366 aaKnown RBP16.8■□□□□ 0.28
TRIM13-204ENST00000420995 C15orf39Q6ZRI6 1047 aa16.8■□□□□ 0.28
TRIM13-204ENST00000420995 ZNF677Q86XU0 584 aa16.8■□□□□ 0.28
TRIM13-204ENST00000420995 ZBED8Q8IZ13 594 aa16.8■□□□□ 0.28
TRIM13-204ENST00000420995 SPDL1Q96EA4 605 aa16.8■□□□□ 0.28
TRIM13-204ENST00000420995 CEP170P1Q96L14 293 aa16.8■□□□□ 0.28
TRIM13-204ENST00000420995 SMC6Q96SB8 1091 aa16.8■□□□□ 0.28
TRIM13-204ENST00000420995 GOLGA8SH3BPF8 625 aa16.79■□□□□ 0.28
TRIM13-204ENST00000420995 GOLGA8MH3BSY2 632 aa16.79■□□□□ 0.28
TRIM13-204ENST00000420995 PRPF4O43172 522 aaKnown RBP eCLIP16.79■□□□□ 0.282e-6■■□□□ 13.2
TRIM13-204ENST00000420995 EDF1O60869 148 aaKnown RBP16.79■□□□□ 0.28
TRIM13-204ENST00000420995 T-ENOLP0DO92 83 aa16.79■□□□□ 0.28
TRIM13-204ENST00000420995 ACO1P21399 889 aaKnown RBP16.79■□□□□ 0.28
TRIM13-204ENST00000420995 GNA15P30679 374 aa16.79■□□□□ 0.28
TRIM13-204ENST00000420995 PIK3CAP42336 1068 aa16.79■□□□□ 0.28
TRIM13-204ENST00000420995 RPS6P62753 249 aaKnown RBP16.79■□□□□ 0.28
TRIM13-204ENST00000420995 PGM5Q15124 567 aa16.79■□□□□ 0.28
TRIM13-204ENST00000420995 PDK4Q16654 411 aa16.79■□□□□ 0.28
TRIM13-204ENST00000420995 WDR44Q5JSH3 913 aa16.79■□□□□ 0.28
TRIM13-204ENST00000420995 MFSD7Q6UXD7 560 aa16.79■□□□□ 0.28
TRIM13-204ENST00000420995 TAS1R3Q7RTX0 852 aa16.79■□□□□ 0.28
TRIM13-204ENST00000420995 FAM13CQ8NE31 585 aa16.79■□□□□ 0.28
TRIM13-204ENST00000420995 LRRC8CQ8TDW0 803 aa16.79■□□□□ 0.28
TRIM13-204ENST00000420995 MICAL1Q8TDZ2 1067 aa16.79■□□□□ 0.28
TRIM13-204ENST00000420995 APOBEC3GQ9HC16 384 aaKnown RBP16.79■□□□□ 0.28
TRIM13-204ENST00000420995 TELO2Q9Y4R8 837 aa16.79■□□□□ 0.28
TRIM13-204ENST00000420995 ZC3H11AO75152 810 aaKnown RBP eCLIP16.79■□□□□ 0.28
TRIM13-204ENST00000420995 EPHB2P29323 1055 aa16.79■□□□□ 0.28
TRIM13-204ENST00000420995 ABL2P42684 1182 aa16.79■□□□□ 0.28
TRIM13-204ENST00000420995 ACOT2P49753 483 aa16.79■□□□□ 0.28
TRIM13-204ENST00000420995 TAF11Q15544 211 aa16.79■□□□□ 0.28
TRIM13-204ENST00000420995 BRDTQ58F21 947 aaPredicted RBP16.79■□□□□ 0.28
TRIM13-204ENST00000420995 SLC7A6OSQ96CW6 309 aaPredicted RBP16.79■□□□□ 0.28
TRIM13-204ENST00000420995 ANKEF1Q9NU02 776 aa16.79■□□□□ 0.28
TRIM13-204ENST00000420995 ZNF70Q9UC06 446 aaPredicted RBP16.79■□□□□ 0.28
TRIM13-204ENST00000420995 CNTNAP1P78357 1384 aa16.79■□□□□ 0.28
TRIM13-204ENST00000420995 ZNF862O60290 1169 aa16.78■□□□□ 0.28
TRIM13-204ENST00000420995 PEX11AO75192 247 aa16.78■□□□□ 0.28
TRIM13-204ENST00000420995 WFS1O76024 890 aa16.78■□□□□ 0.28
TRIM13-204ENST00000420995 PSMC4P43686 418 aa16.78■□□□□ 0.28
TRIM13-204ENST00000420995 JAK3P52333 1124 aa16.78■□□□□ 0.28
TRIM13-204ENST00000420995 NOP14P78316 857 aaKnown RBP16.78■□□□□ 0.28
TRIM13-204ENST00000420995 EFTUD2Q15029 972 aaKnown RBP eCLIP16.78■□□□□ 0.284e-14■■■■□ 22
TRIM13-204ENST00000420995 PARP6Q2NL67 630 aa16.78■□□□□ 0.28
TRIM13-204ENST00000420995 TRIM68Q6AZZ1 485 aa16.78■□□□□ 0.28
TRIM13-204ENST00000420995 PLEKHA7Q6IQ23 1121 aa16.78■□□□□ 0.28
TRIM13-204ENST00000420995 ANKMY2Q8IV38 441 aa16.78■□□□□ 0.28
TRIM13-204ENST00000420995 C10orf82Q8WW14 230 aa16.78■□□□□ 0.28
TRIM13-204ENST00000420995 FAM151AQ8WW52 585 aa16.78■□□□□ 0.28
TRIM13-204ENST00000420995 SLITRK1Q96PX8 696 aa16.78■□□□□ 0.28
TRIM13-204ENST00000420995 TBC1D10AQ9BXI6 508 aa16.78■□□□□ 0.28
TRIM13-204ENST00000420995 MAK16Q9BXY0 300 aaKnown RBP16.78■□□□□ 0.28
TRIM13-204ENST00000420995 ZNF341Q9BYN7 854 aa16.78■□□□□ 0.28
TRIM13-204ENST00000420995 RNPEPL1Q9HAU8 725 aa16.78■□□□□ 0.28
TRIM13-204ENST00000420995 MRPL47Q9HD33 250 aaKnown RBP16.78■□□□□ 0.28
TRIM13-204ENST00000420995 UBN1Q9NPG3 1134 aa16.78■□□□□ 0.28
TRIM13-204ENST00000420995 PCDHB4Q9Y5E5 795 aa16.78■□□□□ 0.28
TRIM13-204ENST00000420995 IFNB1P01574 187 aa16.78■□□□□ 0.28
TRIM13-204ENST00000420995 KRT1P04264 644 aa16.78■□□□□ 0.28
TRIM13-204ENST00000420995 NLRP11P59045 1033 aaKnown RBP16.78■□□□□ 0.28
TRIM13-204ENST00000420995 SP4Q02446 784 aa16.78■□□□□ 0.28
TRIM13-204ENST00000420995 NR1H3Q13133 447 aa16.78■□□□□ 0.28
TRIM13-204ENST00000420995 MTM1Q13496 603 aa16.78■□□□□ 0.28
TRIM13-204ENST00000420995 ZACNQ401N2 412 aa16.78■□□□□ 0.28
TRIM13-204ENST00000420995 TXNRD3NBQ6F5E7 133 aa16.78■□□□□ 0.28
TRIM13-204ENST00000420995 ABRAQ8N0Z2 381 aa16.78■□□□□ 0.28
TRIM13-204ENST00000420995 SPIRE2Q8WWL2 714 aa16.78■□□□□ 0.28
TRIM13-204ENST00000420995 FNBP1Q96RU3 617 aa16.78■□□□□ 0.28
TRIM13-204ENST00000420995 NTPCRQ9BSD7 190 aaKnown RBP16.78■□□□□ 0.28
TRIM13-204ENST00000420995 SCAF8Q9UPN6 1271 aaKnown RBP16.78■□□□□ 0.28
TRIM13-204ENST00000420995 NUMBLQ9Y6R0 609 aa16.78■□□□□ 0.28
TRIM13-204ENST00000420995 IVNS1ABPQ9Y6Y0 642 aa16.78■□□□□ 0.28
TRIM13-204ENST00000420995 CCDC189A1A4V9 331 aa16.77■□□□□ 0.28
TRIM13-204ENST00000420995 SMNDC1O75940 238 aaKnown RBP eCLIP16.77■□□□□ 0.28
TRIM13-204ENST00000420995 VNN1O95497 513 aa16.77■□□□□ 0.28
TRIM13-204ENST00000420995 BPIFB4P59827 614 aa16.77■□□□□ 0.28
TRIM13-204ENST00000420995 GAD2Q05329 585 aa16.77■□□□□ 0.28
TRIM13-204ENST00000420995 EAPPQ56P03 285 aaPredicted RBP16.77■□□□□ 0.28
TRIM13-204ENST00000420995 SCARA3Q6AZY7 606 aa16.77■□□□□ 0.28
TRIM13-204ENST00000420995 OTOAQ7RTW8 1153 aa16.77■□□□□ 0.28
TRIM13-204ENST00000420995 LONP2Q86WA8 852 aa16.77■□□□□ 0.28
TRIM13-204ENST00000420995 TDRPQ86YL5 185 aa16.77■□□□□ 0.28
TRIM13-204ENST00000420995 MCF2L2Q86YR7 1114 aa16.77■□□□□ 0.28
TRIM13-204ENST00000420995 ALLCQ8N6M5 410 aa16.77■□□□□ 0.28
TRIM13-204ENST00000420995 TMEM121Q9BTD3 319 aa16.77■□□□□ 0.28
TRIM13-204ENST00000420995 GABBR1Q9UBS5 961 aa16.77■□□□□ 0.28
TRIM13-204ENST00000420995 SMG5Q9UPR3 1016 aaKnown RBP16.77■□□□□ 0.28
TRIM13-204ENST00000420995 H0Y3Z8 333 aa16.77■□□□□ 0.27
TRIM13-204ENST00000420995 PLSCR1O15162 318 aa16.77■□□□□ 0.27
TRIM13-204ENST00000420995 TYROBPO43914 113 aa16.77■□□□□ 0.27
TRIM13-204ENST00000420995 DCTN3O75935 186 aa16.77■□□□□ 0.27
TRIM13-204ENST00000420995 KRT4P19013 534 aa16.77■□□□□ 0.27
TRIM13-204ENST00000420995 GNAZP19086 355 aa16.77■□□□□ 0.27
TRIM13-204ENST00000420995 CCNG1P51959 295 aa16.77■□□□□ 0.27
TRIM13-204ENST00000420995 PDIA2Q13087 525 aaKnown RBP16.77■□□□□ 0.27
TRIM13-204ENST00000420995 CUL2Q13617 745 aa16.77■□□□□ 0.27
TRIM13-204ENST00000420995 TAF1BQ53T94 588 aaPredicted RBP16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms