RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 SUSD3Q96L08 255 aa13.38□□□□□ -0.27
TMEM53-206ENST00000420706 ZNF558Q96NG5 402 aa13.38□□□□□ -0.27
TMEM53-206ENST00000420706 MMS19Q96T76 1030 aa13.38□□□□□ -0.27
TMEM53-206ENST00000420706 ARID3AQ99856 593 aa13.38□□□□□ -0.27
TMEM53-206ENST00000420706 GPR88Q9GZN0 384 aa13.38□□□□□ -0.27
TMEM53-206ENST00000420706 SDCBP2Q9H190 292 aa13.38□□□□□ -0.27
TMEM53-206ENST00000420706 CYP3A43Q9HB55 503 aa13.38□□□□□ -0.27
TMEM53-206ENST00000420706 IMPACTQ9P2X3 320 aa13.38□□□□□ -0.27
TMEM53-206ENST00000420706 ADAM28Q9UKQ2 775 aa13.38□□□□□ -0.27
TMEM53-206ENST00000420706 I3L4J1 428 aa13.37□□□□□ -0.27
TMEM53-206ENST00000420706 FOXN3O00409 490 aaPredicted RBP13.37□□□□□ -0.27
TMEM53-206ENST00000420706 HUS1O60921 280 aa13.37□□□□□ -0.27
TMEM53-206ENST00000420706 TACC1O75410 805 aa13.37□□□□□ -0.27
TMEM53-206ENST00000420706 EFEMP2O95967 443 aa13.37□□□□□ -0.27
TMEM53-206ENST00000420706 MYOGP15173 224 aa13.37□□□□□ -0.27
TMEM53-206ENST00000420706 ACO1P21399 889 aaKnown RBP13.37□□□□□ -0.27
TMEM53-206ENST00000420706 RAP1GAPP47736 663 aa13.37□□□□□ -0.27
TMEM53-206ENST00000420706 JAM2P57087 298 aa13.37□□□□□ -0.27
TMEM53-206ENST00000420706 ZBED6P86452 979 aa13.37□□□□□ -0.27
TMEM53-206ENST00000420706 RAPGEF1Q13905 1077 aa13.37□□□□□ -0.27
TMEM53-206ENST00000420706 PDXDC1Q6P996 788 aa13.37□□□□□ -0.27
TMEM53-206ENST00000420706 SCARA5Q6ZMJ2 495 aa13.37□□□□□ -0.27
TMEM53-206ENST00000420706 TMEM173Q86WV6 379 aaPredicted RBP13.37□□□□□ -0.27
TMEM53-206ENST00000420706 APPL2Q8NEU8 664 aa13.37□□□□□ -0.27
TMEM53-206ENST00000420706 BCL7CQ8WUZ0 217 aaPredicted RBP13.37□□□□□ -0.27
TMEM53-206ENST00000420706 MRPL45Q9BRJ2 306 aaKnown RBP13.37□□□□□ -0.27
TMEM53-206ENST00000420706 GPR62Q9BZJ7 368 aa13.37□□□□□ -0.27
TMEM53-206ENST00000420706 PRO3102Q9H379 93 aa13.37□□□□□ -0.27
TMEM53-206ENST00000420706 SMYD3Q9H7B4 428 aa13.37□□□□□ -0.27
TMEM53-206ENST00000420706 AAASQ9NRG9 546 aa13.37□□□□□ -0.27
TMEM53-206ENST00000420706 L1RE1Q9UN81 338 aa13.37□□□□□ -0.27
TMEM53-206ENST00000420706 COLQQ9Y215 455 aaPredicted RBP13.37□□□□□ -0.27
TMEM53-206ENST00000420706 LUC7L2Q9Y383 392 aaKnown RBP13.37□□□□□ -0.27
TMEM53-206ENST00000420706 PCDHA11Q9Y5I1 949 aa13.37□□□□□ -0.27
TMEM53-206ENST00000420706 LINC01553A4QN01 128 aa13.36□□□□□ -0.27
TMEM53-206ENST00000420706 AKR1B15C9JRZ8 316 aaPredicted RBP13.36□□□□□ -0.27
TMEM53-206ENST00000420706 TRAPPC3O43617 180 aa13.36□□□□□ -0.27
TMEM53-206ENST00000420706 TPM1P09493 284 aa13.36□□□□□ -0.27
TMEM53-206ENST00000420706 TYMPP19971 482 aa13.36□□□□□ -0.27
TMEM53-206ENST00000420706 KRT9P35527 623 aa13.36□□□□□ -0.27
TMEM53-206ENST00000420706 BMPR1AP36894 532 aa13.36□□□□□ -0.27
TMEM53-206ENST00000420706 ADKP55263 362 aaKnown RBP13.36□□□□□ -0.27
TMEM53-206ENST00000420706 YWHAEP62258 255 aaKnown RBP13.36□□□□□ -0.27
TMEM53-206ENST00000420706 GOLGA8FQ08AF8 430 aa13.36□□□□□ -0.27
TMEM53-206ENST00000420706 GOLGA8DPQ0D2H9 430 aa13.36□□□□□ -0.27
TMEM53-206ENST00000420706 WSCD1Q658N2 575 aa13.36□□□□□ -0.27
TMEM53-206ENST00000420706 SMYD5Q6GMV2 418 aa13.36□□□□□ -0.27
TMEM53-206ENST00000420706 FUT10Q6P4F1 479 aa13.36□□□□□ -0.27
TMEM53-206ENST00000420706 OSTM1Q86WC4 334 aa13.36□□□□□ -0.27
TMEM53-206ENST00000420706 TDHQ8IZJ6 230 aa13.36□□□□□ -0.27
TMEM53-206ENST00000420706 PDCL2Q8N4E4 241 aa13.36□□□□□ -0.27
TMEM53-206ENST00000420706 ZNF397Q8NF99 534 aaPredicted RBP13.36□□□□□ -0.27
TMEM53-206ENST00000420706 KBTBD7Q8WVZ9 684 aa13.36□□□□□ -0.27
TMEM53-206ENST00000420706 SHC3Q92529 594 aa13.36□□□□□ -0.27
TMEM53-206ENST00000420706 SPAG5Q96R06 1193 aa13.36□□□□□ -0.27
TMEM53-206ENST00000420706 FAM124BQ9H5Z6 455 aaPredicted RBP13.36□□□□□ -0.27
TMEM53-206ENST00000420706 CISHQ9NSE2 258 aa13.36□□□□□ -0.27
TMEM53-206ENST00000420706 SPG21Q9NZD8 308 aa13.36□□□□□ -0.27
TMEM53-206ENST00000420706 MYO6Q9UM54 1294 aa13.36□□□□□ -0.27
TMEM53-206ENST00000420706 PCDHB8Q9UN66 801 aa13.36□□□□□ -0.27
TMEM53-206ENST00000420706 CNTN6Q9UQ52 1028 aa13.36□□□□□ -0.27
TMEM53-206ENST00000420706 PCDHB4Q9Y5E5 795 aa13.36□□□□□ -0.27
TMEM53-206ENST00000420706 PCDHB12Q9Y5F1 795 aa13.36□□□□□ -0.27
TMEM53-206ENST00000420706 TIMM13Q9Y5L4 95 aaPredicted RBP13.36□□□□□ -0.27
TMEM53-206ENST00000420706 KIAA1671Q9BY89 1806 aa13.36□□□□□ -0.27
TMEM53-206ENST00000420706 ARHGEF37A1IGU5 675 aa13.35□□□□□ -0.27
TMEM53-206ENST00000420706 LRRC53A6NM62 1247 aa13.35□□□□□ -0.27
TMEM53-206ENST00000420706 GABRDO14764 452 aa13.35□□□□□ -0.27
TMEM53-206ENST00000420706 ARHGEF15O94989 841 aa13.35□□□□□ -0.27
TMEM53-206ENST00000420706 CYP11A1P05108 521 aa13.35□□□□□ -0.27
TMEM53-206ENST00000420706 PNMA6AP0CW24 399 aaPredicted RBP13.35□□□□□ -0.27
TMEM53-206ENST00000420706 ODC1P11926 461 aa13.35□□□□□ -0.27
TMEM53-206ENST00000420706 CD58P19256 250 aa13.35□□□□□ -0.27
TMEM53-206ENST00000420706 WARSP23381 471 aaKnown RBP13.35□□□□□ -0.27
TMEM53-206ENST00000420706 SOX5P35711 763 aa13.35□□□□□ -0.27
TMEM53-206ENST00000420706 GNL1P36915 607 aaPredicted RBP13.35□□□□□ -0.27
TMEM53-206ENST00000420706 PBX2P40425 430 aa13.35□□□□□ -0.27
TMEM53-206ENST00000420706 STAT1P42224 750 aa13.35□□□□□ -0.27
TMEM53-206ENST00000420706 INCA1Q0VD86 236 aa13.35□□□□□ -0.27
TMEM53-206ENST00000420706 ELAVL2Q12926 359 aaKnown RBP13.35□□□□□ -0.27
TMEM53-206ENST00000420706 ARID5BQ14865 1188 aa13.35□□□□□ -0.27
TMEM53-206ENST00000420706 FAM171A1Q5VUB5 890 aa13.35□□□□□ -0.27
TMEM53-206ENST00000420706 TAS1R1Q7RTX1 841 aa13.35□□□□□ -0.27
TMEM53-206ENST00000420706 FAM71AQ8IYT1 594 aa13.35□□□□□ -0.27
TMEM53-206ENST00000420706 RNF168Q8IYW5 571 aaPredicted RBP13.35□□□□□ -0.27
TMEM53-206ENST00000420706 ADGRF2Q8IZF7 708 aa13.35□□□□□ -0.27
TMEM53-206ENST00000420706 TMEM86AQ8N2M4 240 aa13.35□□□□□ -0.27
TMEM53-206ENST00000420706 TTC39CQ8N584 583 aa13.35□□□□□ -0.27
TMEM53-206ENST00000420706 TC2NQ8N9U0 490 aa13.35□□□□□ -0.27
TMEM53-206ENST00000420706 OR6B3Q8NGW1 331 aa13.35□□□□□ -0.27
TMEM53-206ENST00000420706 WHAMMQ8TF30 809 aa13.35□□□□□ -0.27
TMEM53-206ENST00000420706 PBX4Q9BYU1 374 aa13.35□□□□□ -0.27
TMEM53-206ENST00000420706 DSEQ9UL01 958 aa13.35□□□□□ -0.27
TMEM53-206ENST00000420706 BARX2Q9UMQ3 279 aaPredicted RBP13.35□□□□□ -0.27
TMEM53-206ENST00000420706 YBX2Q9Y2T7 364 aaKnown RBP13.35□□□□□ -0.27
TMEM53-206ENST00000420706 RWDD3Q9Y3V2 267 aa13.35□□□□□ -0.27
TMEM53-206ENST00000420706 NME7Q9Y5B8 376 aa13.35□□□□□ -0.27
TMEM53-206ENST00000420706 GBF1Q92538 1859 aa13.35□□□□□ -0.27
TMEM53-206ENST00000420706 GOLGA6L6A8MZA4 724 aa13.34□□□□□ -0.27
TMEM53-206ENST00000420706 F8VZ95 297 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 139.5 ms