RNA–Protein interactions for RNA: ENST00000420482.5

PTPN4-202, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-202ENST00000420482 PANK4Q9NVE7 773 aa23.08■■□□□ 1.29
PTPN4-202ENST00000420482 TBC1D7Q9P0N9 293 aa23.08■■□□□ 1.29
PTPN4-202ENST00000420482 HSFX1Q9UBD0 423 aa23.08■■□□□ 1.29
PTPN4-202ENST00000420482 YIPF1Q9Y548 306 aa23.08■■□□□ 1.29
PTPN4-202ENST00000420482 KANSL1LA0AUZ9 987 aa23.07■■□□□ 1.28
PTPN4-202ENST00000420482 ANO9A1A5B4 782 aa23.07■■□□□ 1.28
PTPN4-202ENST00000420482 SPTLC2O15270 562 aa23.07■■□□□ 1.28
PTPN4-202ENST00000420482 MYL4P12829 197 aa23.07■■□□□ 1.28
PTPN4-202ENST00000420482 PNPLA4P41247 253 aa23.07■■□□□ 1.28
PTPN4-202ENST00000420482 AMPD3Q01432 767 aa23.07■■□□□ 1.28
PTPN4-202ENST00000420482 HSCBQ8IWL3 235 aa23.07■■□□□ 1.28
PTPN4-202ENST00000420482 PJA1Q8NG27 643 aa23.07■■□□□ 1.28
PTPN4-202ENST00000420482 CACTINQ8WUQ7 758 aaKnown RBP23.07■■□□□ 1.28
PTPN4-202ENST00000420482 SNX21Q969T3 373 aa23.07■■□□□ 1.28
PTPN4-202ENST00000420482 ZNF560Q96MR9 790 aa23.07■■□□□ 1.28
PTPN4-202ENST00000420482 PGLYRP2Q96PD5 576 aa23.07■■□□□ 1.28
PTPN4-202ENST00000420482 STRA6Q9BX79 667 aa23.07■■□□□ 1.28
PTPN4-202ENST00000420482 CUEDC2Q9H467 287 aa23.07■■□□□ 1.28
PTPN4-202ENST00000420482 CEP72Q9P209 647 aa23.07■■□□□ 1.28
PTPN4-202ENST00000420482 ASB3Q9Y575 518 aa23.07■■□□□ 1.28
PTPN4-202ENST00000420482 FANCMQ8IYD8 2048 aa23.06■■□□□ 1.28
PTPN4-202ENST00000420482 TISP43B9A030 160 aa23.06■■□□□ 1.28
PTPN4-202ENST00000420482 TULP1O00294 542 aaPredicted RBP23.06■■□□□ 1.28
PTPN4-202ENST00000420482 PPP6R2O75170 966 aa23.06■■□□□ 1.28
PTPN4-202ENST00000420482 FGF19O95750 216 aa23.06■■□□□ 1.28
PTPN4-202ENST00000420482 CYP11A1P05108 521 aa23.06■■□□□ 1.28
PTPN4-202ENST00000420482 OR4Q2P0C623 313 aa23.06■■□□□ 1.28
PTPN4-202ENST00000420482 GARTP22102 1010 aa23.06■■□□□ 1.28
PTPN4-202ENST00000420482 EPHA5P54756 1037 aa23.06■■□□□ 1.28
PTPN4-202ENST00000420482 SV2CQ496J9 727 aa23.06■■□□□ 1.28
PTPN4-202ENST00000420482 FRMD5Q7Z6J6 570 aa23.06■■□□□ 1.28
PTPN4-202ENST00000420482 ITIH5Q86UX2 942 aa23.06■■□□□ 1.28
PTPN4-202ENST00000420482 PDILTQ8N807 584 aa23.06■■□□□ 1.28
PTPN4-202ENST00000420482 LINC00301Q8NCQ3 95 aa23.06■■□□□ 1.28
PTPN4-202ENST00000420482 NKD2Q969F2 451 aaPredicted RBP23.06■■□□□ 1.28
PTPN4-202ENST00000420482 NELL2Q99435 816 aa23.06■■□□□ 1.28
PTPN4-202ENST00000420482 FAM213AQ9BRX8 229 aa23.06■■□□□ 1.28
PTPN4-202ENST00000420482 BCO2Q9BYV7 579 aa23.06■■□□□ 1.28
PTPN4-202ENST00000420482 TNMDQ9H2S6 317 aa23.06■■□□□ 1.28
PTPN4-202ENST00000420482 SLITRK6Q9H5Y7 841 aa23.06■■□□□ 1.28
PTPN4-202ENST00000420482 NOTCH4Q99466 2003 aa23.06■■□□□ 1.28
PTPN4-202ENST00000420482 PPEF2O14830 753 aa23.05■■□□□ 1.28
PTPN4-202ENST00000420482 NCAM2O15394 837 aa23.05■■□□□ 1.28
PTPN4-202ENST00000420482 DCNP07585 359 aaKnown RBP23.05■■□□□ 1.28
PTPN4-202ENST00000420482 SMARCB1Q12824 385 aa23.05■■□□□ 1.28
PTPN4-202ENST00000420482 DUSP4Q13115 394 aa23.05■■□□□ 1.28
PTPN4-202ENST00000420482 TMEM130Q8N3G9 435 aa23.05■■□□□ 1.28
PTPN4-202ENST00000420482 DNASE1L2Q92874 299 aa23.05■■□□□ 1.28
PTPN4-202ENST00000420482 SMARCD2Q92925 531 aa23.05■■□□□ 1.28
PTPN4-202ENST00000420482 E2F7Q96AV8 911 aa23.05■■□□□ 1.28
PTPN4-202ENST00000420482 TCEAL4Q96EI5 215 aa23.05■■□□□ 1.28
PTPN4-202ENST00000420482 ASB16Q96NS5 453 aa23.05■■□□□ 1.28
PTPN4-202ENST00000420482 OSBPL6Q9BZF3 934 aa23.05■■□□□ 1.28
PTPN4-202ENST00000420482 MRPS17Q9Y2R5 130 aaKnown RBP23.05■■□□□ 1.28
PTPN4-202ENST00000420482 MIA3Q5JRA6 1907 aa23.05■■□□□ 1.28
PTPN4-202ENST00000420482 FRMD3A2A2Y4 597 aa23.04■■□□□ 1.28
PTPN4-202ENST00000420482 CYB561D2O14569 222 aa23.04■■□□□ 1.28
PTPN4-202ENST00000420482 KIAA0391O15091 583 aaKnown RBP23.04■■□□□ 1.28
PTPN4-202ENST00000420482 YEATS4O95619 227 aa23.04■■□□□ 1.28
PTPN4-202ENST00000420482 ADSSP30520 456 aa23.04■■□□□ 1.28
PTPN4-202ENST00000420482 MAGEA9P43362 315 aa23.04■■□□□ 1.28
PTPN4-202ENST00000420482 TUFMP49411 452 aaKnown RBP23.04■■□□□ 1.28
PTPN4-202ENST00000420482 UBXN2BQ14CS0 331 aa23.04■■□□□ 1.28
PTPN4-202ENST00000420482 VEPH1Q14D04 833 aa23.04■■□□□ 1.28
PTPN4-202ENST00000420482 TANGO2Q6ICL3 276 aa23.04■■□□□ 1.28
PTPN4-202ENST00000420482 CENPPQ6IPU0 288 aa23.04■■□□□ 1.28
PTPN4-202ENST00000420482 HS6ST3Q8IZP7 471 aa23.04■■□□□ 1.28
PTPN4-202ENST00000420482 C2orf15Q8WU43 125 aaKnown RBP23.04■■□□□ 1.28
PTPN4-202ENST00000420482 IRF7Q92985 503 aa23.04■■□□□ 1.28
PTPN4-202ENST00000420482 PYM1Q9BRP8 204 aaKnown RBP23.04■■□□□ 1.28
PTPN4-202ENST00000420482 TRMT61BQ9BVS5 477 aaKnown RBP23.04■■□□□ 1.28
PTPN4-202ENST00000420482 BRD9Q9H8M2 597 aa23.04■■□□□ 1.28
PTPN4-202ENST00000420482 RBAKQ9NYW8 714 aaPredicted RBP23.04■■□□□ 1.28
PTPN4-202ENST00000420482 R3HCC1Q9Y3T6 440 aaKnown RBP23.04■■□□□ 1.28
PTPN4-202ENST00000420482 MTMR11A4FU01 709 aa23.03■■□□□ 1.28
PTPN4-202ENST00000420482 KPNA7A9QM74 516 aa23.03■■□□□ 1.28
PTPN4-202ENST00000420482 SPTLC1O15269 473 aa23.03■■□□□ 1.28
PTPN4-202ENST00000420482 KCNA1Q09470 495 aa23.03■■□□□ 1.28
PTPN4-202ENST00000420482 FAM78AQ5JUQ0 283 aa23.03■■□□□ 1.28
PTPN4-202ENST00000420482 ZC3H14Q6PJT7 736 aaKnown RBP23.03■■□□□ 1.28
PTPN4-202ENST00000420482 CRELD2Q6UXH1 353 aaPredicted RBP23.03■■□□□ 1.28
PTPN4-202ENST00000420482 C1orf210Q8IVY1 113 aa23.03■■□□□ 1.28
PTPN4-202ENST00000420482 IQUBQ8NA54 791 aa23.03■■□□□ 1.28
PTPN4-202ENST00000420482 DEPDC1BQ8WUY9 529 aa23.03■■□□□ 1.28
PTPN4-202ENST00000420482 DDX23Q9BUQ8 820 aaKnown RBP23.03■■□□□ 1.28
PTPN4-202ENST00000420482 FOXQ1Q9C009 403 aa23.03■■□□□ 1.28
PTPN4-202ENST00000420482 SEMA4AQ9H3S1 761 aa23.03■■□□□ 1.28
PTPN4-202ENST00000420482 ZNF292O60281 2723 aa23.02■■□□□ 1.28
PTPN4-202ENST00000420482 CUTAO60888 179 aa23.02■■□□□ 1.28
PTPN4-202ENST00000420482 PSMC3P17980 439 aa23.02■■□□□ 1.28
PTPN4-202ENST00000420482 CCR2P41597 374 aa23.02■■□□□ 1.28
PTPN4-202ENST00000420482 TFAMQ00059 246 aaKnown RBP23.02■■□□□ 1.28
PTPN4-202ENST00000420482 TAF12Q16514 161 aa23.02■■□□□ 1.28
PTPN4-202ENST00000420482 SLC39A12Q504Y0 691 aa23.02■■□□□ 1.28
PTPN4-202ENST00000420482 ZNF852Q6ZMS4 543 aa23.02■■□□□ 1.28
PTPN4-202ENST00000420482 BRSK2Q8IWQ3 736 aa23.02■■□□□ 1.28
PTPN4-202ENST00000420482 DCP1BQ8IZD4 617 aaKnown RBP23.02■■□□□ 1.28
PTPN4-202ENST00000420482 FAM200AQ8TCP9 573 aa23.02■■□□□ 1.28
PTPN4-202ENST00000420482 NOC3LQ8WTT2 800 aaKnown RBP23.02■■□□□ 1.28
PTPN4-202ENST00000420482 A0A087X0B3 334 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms