RNA–Protein interactions for RNA: ENST00000420455.5

TMEM50B-201, Transcript of transmembrane protein 50B, humanhuman

TSL 1 (best)

Gene TMEM50B, Length 3,062 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-201ENST00000420455 PTP4A2Q12974 167 aa14.29□□□□□ -0.12
TMEM50B-201ENST00000420455 ZNF667Q5HYK9 610 aa14.29□□□□□ -0.12
TMEM50B-201ENST00000420455 MON1BQ7L1V2 547 aa14.29□□□□□ -0.12
TMEM50B-201ENST00000420455 NT5DC3Q86UY8 548 aa14.29□□□□□ -0.12
TMEM50B-201ENST00000420455 KIF12Q96FN5 646 aa14.29□□□□□ -0.12
TMEM50B-201ENST00000420455 RNF14Q9UBS8 474 aa14.29□□□□□ -0.12
TMEM50B-201ENST00000420455 POLIQ9UNA4 740 aa14.29□□□□□ -0.12
TMEM50B-201ENST00000420455 GINS2Q9Y248 185 aa14.29□□□□□ -0.12
TMEM50B-201ENST00000420455 IPPQ9Y573 584 aa14.29□□□□□ -0.12
TMEM50B-201ENST00000420455 TMCO5BA8MYB1 307 aa14.29□□□□□ -0.12
TMEM50B-201ENST00000420455 RECQL4O94761 1208 aa14.29□□□□□ -0.12
TMEM50B-201ENST00000420455 LSM8O95777 96 aaKnown RBP14.29□□□□□ -0.12
TMEM50B-201ENST00000420455 PLA2G4AP47712 749 aa14.29□□□□□ -0.12
TMEM50B-201ENST00000420455 YARSP54577 528 aaKnown RBP14.29□□□□□ -0.12
TMEM50B-201ENST00000420455 ITGA7Q13683 1181 aa14.29□□□□□ -0.12
TMEM50B-201ENST00000420455 PTGISQ16647 500 aa14.29□□□□□ -0.12
TMEM50B-201ENST00000420455 MCOLN2Q8IZK6 566 aa14.29□□□□□ -0.12
TMEM50B-201ENST00000420455 TMEM130Q8N3G9 435 aa14.29□□□□□ -0.12
TMEM50B-201ENST00000420455 ZNF606Q8WXB4 792 aa14.29□□□□□ -0.12
TMEM50B-201ENST00000420455 ERVK-5Q9HDB9 667 aa14.29□□□□□ -0.12
TMEM50B-201ENST00000420455 M0QZ92 97 aa14.28□□□□□ -0.12
TMEM50B-201ENST00000420455 CILPO75339 1184 aa14.28□□□□□ -0.12
TMEM50B-201ENST00000420455 CALCAP01258 141 aa14.28□□□□□ -0.12
TMEM50B-201ENST00000420455 POLR2BP30876 1174 aaKnown RBP14.28□□□□□ -0.12
TMEM50B-201ENST00000420455 LONRF2Q1L5Z9 754 aa14.28□□□□□ -0.12
TMEM50B-201ENST00000420455 MRPL10Q7Z7H8 261 aaKnown RBP14.28□□□□□ -0.12
TMEM50B-201ENST00000420455 TTC39CQ8N584 583 aa14.28□□□□□ -0.12
TMEM50B-201ENST00000420455 HDAC7Q8WUI4 952 aa14.28□□□□□ -0.12
TMEM50B-201ENST00000420455 HPDLQ96IR7 371 aa14.28□□□□□ -0.12
TMEM50B-201ENST00000420455 UBXN6Q9BZV1 441 aa14.28□□□□□ -0.12
TMEM50B-201ENST00000420455 UVRAGQ9P2Y5 699 aa14.28□□□□□ -0.12
TMEM50B-201ENST00000420455 BRCA2P51587 3418 aa14.28□□□□□ -0.12
TMEM50B-201ENST00000420455 PIRO00625 290 aa14.28□□□□□ -0.12
TMEM50B-201ENST00000420455 CFHP08603 1231 aa14.28□□□□□ -0.12
TMEM50B-201ENST00000420455 DSC3Q14574 896 aa14.28□□□□□ -0.12
TMEM50B-201ENST00000420455 TRAF7Q6Q0C0 670 aa14.28□□□□□ -0.12
TMEM50B-201ENST00000420455 MMGT1Q8N4V1 131 aa14.28□□□□□ -0.12
TMEM50B-201ENST00000420455 CAGE1Q8TC20 777 aa14.28□□□□□ -0.12
TMEM50B-201ENST00000420455 TRIM11Q96F44 468 aa14.28□□□□□ -0.12
TMEM50B-201ENST00000420455 ZNF518BQ9C0D4 1074 aa14.28□□□□□ -0.12
TMEM50B-201ENST00000420455 ST3GAL5Q9UNP4 418 aa14.28□□□□□ -0.12
TMEM50B-201ENST00000420455 BUB1BO60566 1050 aaPredicted RBP14.28□□□□□ -0.12
TMEM50B-201ENST00000420455 RAD23BP54727 409 aa14.28□□□□□ -0.12
TMEM50B-201ENST00000420455 FBXO47Q5MNV8 452 aa14.28□□□□□ -0.12
TMEM50B-201ENST00000420455 SEZ6LQ9BYH1 1024 aa14.28□□□□□ -0.12
TMEM50B-201ENST00000420455 LHX5Q9H2C1 402 aa14.28□□□□□ -0.12
TMEM50B-201ENST00000420455 HMX1Q9NP08 348 aaPredicted RBP14.28□□□□□ -0.12
TMEM50B-201ENST00000420455 ARFGAP3Q9NP61 516 aa14.28□□□□□ -0.12
TMEM50B-201ENST00000420455 RBM12Q9NTZ6 932 aaKnown RBP14.28□□□□□ -0.12
TMEM50B-201ENST00000420455 SEPT11Q9NVA2 429 aaKnown RBP14.28□□□□□ -0.12
TMEM50B-201ENST00000420455 UBQLN1Q9UMX0 589 aaKnown RBP14.28□□□□□ -0.12
TMEM50B-201ENST00000420455 AGAP1Q9UPQ3 857 aa14.28□□□□□ -0.12
TMEM50B-201ENST00000420455 PHF24Q9UPV7 400 aa14.28□□□□□ -0.12
TMEM50B-201ENST00000420455 HES2Q9Y543 173 aa14.28□□□□□ -0.12
TMEM50B-201ENST00000420455 SMIM28A0A1B0GU29 152 aa14.27□□□□□ -0.12
TMEM50B-201ENST00000420455 KIF4AO95239 1232 aa14.27□□□□□ -0.12
TMEM50B-201ENST00000420455 WEE2P0C1S8 567 aa14.27□□□□□ -0.12
TMEM50B-201ENST00000420455 MYBL2P10244 700 aa14.27□□□□□ -0.12
TMEM50B-201ENST00000420455 P4HA1P13674 534 aa14.27□□□□□ -0.12
TMEM50B-201ENST00000420455 ABCB4P21439 1286 aa14.27□□□□□ -0.12
TMEM50B-201ENST00000420455 GRK4P32298 578 aa14.27□□□□□ -0.12
TMEM50B-201ENST00000420455 PTPROQ16827 1216 aa14.27□□□□□ -0.12
TMEM50B-201ENST00000420455 WDR72Q3MJ13 1102 aa14.27□□□□□ -0.12
TMEM50B-201ENST00000420455 ARRDC4Q8NCT1 418 aa14.27□□□□□ -0.12
TMEM50B-201ENST00000420455 CYFIP2Q96F07 1278 aa14.27□□□□□ -0.12
TMEM50B-201ENST00000420455 RNF39Q9H2S5 420 aa14.27□□□□□ -0.12
TMEM50B-201ENST00000420455 ST7Q9NRC1 585 aa14.27□□□□□ -0.12
TMEM50B-201ENST00000420455 TARSL2A2RTX5 802 aaKnown RBP14.27□□□□□ -0.13
TMEM50B-201ENST00000420455 MAP2K7O14733 419 aa14.27□□□□□ -0.13
TMEM50B-201ENST00000420455 GPR182O15218 404 aa14.27□□□□□ -0.13
TMEM50B-201ENST00000420455 C1QBPQ07021 282 aaKnown RBP14.27□□□□□ -0.13
TMEM50B-201ENST00000420455 C9orf57Q5W0N0 161 aa14.27□□□□□ -0.13
TMEM50B-201ENST00000420455 BEST2Q8NFU1 509 aa14.27□□□□□ -0.13
TMEM50B-201ENST00000420455 PPP1R10Q96QC0 940 aaKnown RBP14.27□□□□□ -0.13
TMEM50B-201ENST00000420455 RPS6KC1Q96S38 1066 aa14.27□□□□□ -0.13
TMEM50B-201ENST00000420455 SMYD3Q9H7B4 428 aa14.27□□□□□ -0.13
TMEM50B-201ENST00000420455 L1RE1Q9UN81 338 aa14.27□□□□□ -0.13
TMEM50B-201ENST00000420455 TCRBV5S1A1TA0A578 114 aa14.26□□□□□ -0.13
TMEM50B-201ENST00000420455 RPS6KA5O75582 802 aa14.26□□□□□ -0.13
TMEM50B-201ENST00000420455 KRT19P08727 400 aa14.26□□□□□ -0.13
TMEM50B-201ENST00000420455 NOP2P46087 812 aaKnown RBP14.26□□□□□ -0.13
TMEM50B-201ENST00000420455 DNA2P51530 1060 aa14.26□□□□□ -0.13
TMEM50B-201ENST00000420455 GUCY2FP51841 1108 aa14.26□□□□□ -0.13
TMEM50B-201ENST00000420455 SLC4A11Q8NBS3 891 aa14.26□□□□□ -0.13
TMEM50B-201ENST00000420455 TFAP2BQ92481 460 aa14.26□□□□□ -0.13
TMEM50B-201ENST00000420455 CD101Q93033 1021 aa14.26□□□□□ -0.13
TMEM50B-201ENST00000420455 LRRC1Q9BTT6 524 aa14.26□□□□□ -0.13
TMEM50B-201ENST00000420455 TUBGCP4Q9UGJ1 667 aa14.26□□□□□ -0.13
TMEM50B-201ENST00000420455 SCN1AP35498 2009 aa14.26□□□□□ -0.13
TMEM50B-201ENST00000420455 DDX3YO15523 660 aaKnown RBP14.26□□□□□ -0.13
TMEM50B-201ENST00000420455 ZNF623O75123 536 aa14.26□□□□□ -0.13
TMEM50B-201ENST00000420455 ZMYND10O75800 440 aa14.26□□□□□ -0.13
TMEM50B-201ENST00000420455 CD4P01730 458 aa14.26□□□□□ -0.13
TMEM50B-201ENST00000420455 LRPAP1P30533 357 aa14.26□□□□□ -0.13
TMEM50B-201ENST00000420455 GSCP56915 257 aaPredicted RBP14.26□□□□□ -0.13
TMEM50B-201ENST00000420455 MRPS25P82663 173 aaKnown RBP14.26□□□□□ -0.13
TMEM50B-201ENST00000420455 RASGEF1CQ8N431 466 aa14.26□□□□□ -0.13
TMEM50B-201ENST00000420455 WDTC1Q8N5D0 677 aa14.26□□□□□ -0.13
TMEM50B-201ENST00000420455 USP38Q8NB14 1042 aa14.26□□□□□ -0.13
TMEM50B-201ENST00000420455 PBKQ96KB5 322 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms