RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 ELF1P32519 619 aa11.96□□□□□ -0.49
SSBP3-206ENST00000420121 HOXD13P35453 343 aa11.96□□□□□ -0.49
SSBP3-206ENST00000420121 GPR17Q13304 367 aa11.96□□□□□ -0.49
SSBP3-206ENST00000420121 MTSS1LQ765P7 747 aa11.96□□□□□ -0.49
SSBP3-206ENST00000420121 CCDC105Q8IYK2 499 aa11.96□□□□□ -0.49
SSBP3-206ENST00000420121 TTC9BQ8N6N2 239 aa11.96□□□□□ -0.49
SSBP3-206ENST00000420121 OR10T2Q8NGX3 314 aa11.96□□□□□ -0.49
SSBP3-206ENST00000420121 CXorf38Q8TB03 319 aa11.96□□□□□ -0.49
SSBP3-206ENST00000420121 POMGNT1Q8WZA1 660 aa11.96□□□□□ -0.49
SSBP3-206ENST00000420121 HPS3Q969F9 1004 aa11.96□□□□□ -0.49
SSBP3-206ENST00000420121 MCRS1Q96EZ8 462 aa11.96□□□□□ -0.49
SSBP3-206ENST00000420121 FAM84AQ96KN4 292 aa11.96□□□□□ -0.49
SSBP3-206ENST00000420121 ACCSQ96QU6 501 aa11.96□□□□□ -0.49
SSBP3-206ENST00000420121 KXD1Q9BQD3 176 aa11.96□□□□□ -0.49
SSBP3-206ENST00000420121 CORO1BQ9BR76 489 aa11.96□□□□□ -0.49
SSBP3-206ENST00000420121 TBC1D17Q9HA65 648 aa11.96□□□□□ -0.49
SSBP3-206ENST00000420121 ARHGEF3Q9NR81 526 aa11.96□□□□□ -0.49
SSBP3-206ENST00000420121 PANK4Q9NVE7 773 aa11.96□□□□□ -0.49
SSBP3-206ENST00000420121 DLGAP2Q9P1A6 1054 aa11.96□□□□□ -0.49
SSBP3-206ENST00000420121 MAFFQ9ULX9 164 aa11.96□□□□□ -0.49
SSBP3-206ENST00000420121 YIPF1Q9Y548 306 aa11.96□□□□□ -0.49
SSBP3-206ENST00000420121 NCANO14594 1321 aa11.95□□□□□ -0.5
SSBP3-206ENST00000420121 MTMR11A4FU01 709 aa11.95□□□□□ -0.5
SSBP3-206ENST00000420121 OR6C75A6NL08 312 aa11.95□□□□□ -0.5
SSBP3-206ENST00000420121 SHISA7A6NL88 538 aa11.95□□□□□ -0.5
SSBP3-206ENST00000420121 MICAL2O94851 1124 aa11.95□□□□□ -0.5
SSBP3-206ENST00000420121 PRPF6O94906 941 aaKnown RBP11.95□□□□□ -0.5
SSBP3-206ENST00000420121 F13A1P00488 732 aa11.95□□□□□ -0.5
SSBP3-206ENST00000420121 ZSCAN22P10073 491 aaPredicted RBP11.95□□□□□ -0.5
SSBP3-206ENST00000420121 STARD6P59095 220 aa11.95□□□□□ -0.5
SSBP3-206ENST00000420121 TWF1Q12792 350 aa11.95□□□□□ -0.5
SSBP3-206ENST00000420121 MYBPC2Q14324 1141 aa11.95□□□□□ -0.5
SSBP3-206ENST00000420121 POSTNQ15063 836 aa11.95□□□□□ -0.5
SSBP3-206ENST00000420121 FOXD4L5Q5VV16 416 aaPredicted RBP11.95□□□□□ -0.5
SSBP3-206ENST00000420121 TANGO2Q6ICL3 276 aa11.95□□□□□ -0.5
SSBP3-206ENST00000420121 OVOS1Q6IE37 1185 aa11.95□□□□□ -0.5
SSBP3-206ENST00000420121 CENPPQ6IPU0 288 aa11.95□□□□□ -0.5
SSBP3-206ENST00000420121 PHLDB3Q6NSJ2 640 aa11.95□□□□□ -0.5
SSBP3-206ENST00000420121 DSTYKQ6XUX3 929 aa11.95□□□□□ -0.5
SSBP3-206ENST00000420121 TMC8Q8IU68 726 aa11.95□□□□□ -0.5
SSBP3-206ENST00000420121 BRSK2Q8IWQ3 736 aa11.95□□□□□ -0.5
SSBP3-206ENST00000420121 FOXD4L4Q8WXT5 416 aaPredicted RBP11.95□□□□□ -0.5
SSBP3-206ENST00000420121 SAAL1Q96ER3 474 aa11.95□□□□□ -0.5
SSBP3-206ENST00000420121 ZNF396Q96N95 335 aaPredicted RBP11.95□□□□□ -0.5
SSBP3-206ENST00000420121 PGLYRP2Q96PD5 576 aa11.95□□□□□ -0.5
SSBP3-206ENST00000420121 CBWD1Q9BRT8 395 aa11.95□□□□□ -0.5
SSBP3-206ENST00000420121 DDX23Q9BUQ8 820 aaKnown RBP11.95□□□□□ -0.5
SSBP3-206ENST00000420121 OXCT2Q9BYC2 517 aaPredicted RBP11.95□□□□□ -0.5
SSBP3-206ENST00000420121 TRIM9Q9C026 710 aa11.95□□□□□ -0.5
SSBP3-206ENST00000420121 TNMDQ9H2S6 317 aa11.95□□□□□ -0.5
SSBP3-206ENST00000420121 DPP3Q9NY33 737 aa11.95□□□□□ -0.5
SSBP3-206ENST00000420121 GDE1Q9NZC3 331 aa11.95□□□□□ -0.5
SSBP3-206ENST00000420121 PCDHB13Q9Y5F0 798 aa11.95□□□□□ -0.5
SSBP3-206ENST00000420121 PTPRDP23468 1912 aa11.94□□□□□ -0.5
SSBP3-206ENST00000420121 GREB1Q4ZG55 1949 aa11.94□□□□□ -0.5
SSBP3-206ENST00000420121 CFAP54Q96N23 3096 aa11.94□□□□□ -0.5
SSBP3-206ENST00000420121 PROB1E7EW31 1015 aa11.94□□□□□ -0.5
SSBP3-206ENST00000420121 CUTAO60888 179 aa11.94□□□□□ -0.5
SSBP3-206ENST00000420121 ECI2O75521 394 aa11.94□□□□□ -0.5
SSBP3-206ENST00000420121 IL18RAPO95256 599 aa11.94□□□□□ -0.5
SSBP3-206ENST00000420121 ODC1P11926 461 aa11.94□□□□□ -0.5
SSBP3-206ENST00000420121 GLULP15104 373 aa11.94□□□□□ -0.5
SSBP3-206ENST00000420121 GJA1P17302 382 aa11.94□□□□□ -0.5
SSBP3-206ENST00000420121 GARTP22102 1010 aa11.94□□□□□ -0.5
SSBP3-206ENST00000420121 PAX3P23760 479 aa11.94□□□□□ -0.5
SSBP3-206ENST00000420121 EHHADHQ08426 723 aa11.94□□□□□ -0.5
SSBP3-206ENST00000420121 DUSP4Q13115 394 aa11.94□□□□□ -0.5
SSBP3-206ENST00000420121 ALCAMQ13740 583 aa11.94□□□□□ -0.5
SSBP3-206ENST00000420121 FAM78AQ5JUQ0 283 aa11.94□□□□□ -0.5
SSBP3-206ENST00000420121 CNNM4Q6P4Q7 775 aa11.94□□□□□ -0.5
SSBP3-206ENST00000420121 EPM2AIP1Q7L775 607 aaPredicted RBP11.94□□□□□ -0.5
SSBP3-206ENST00000420121 USP37Q86T82 979 aa11.94□□□□□ -0.5
SSBP3-206ENST00000420121 DTWD2Q8NBA8 298 aa11.94□□□□□ -0.5
SSBP3-206ENST00000420121 ATAD1Q8NBU5 361 aa11.94□□□□□ -0.5
SSBP3-206ENST00000420121 ATOH1Q92858 354 aaPredicted RBP11.94□□□□□ -0.5
SSBP3-206ENST00000420121 ZSWIM3Q96MP5 696 aa11.94□□□□□ -0.5
SSBP3-206ENST00000420121 FAM213AQ9BRX8 229 aa11.94□□□□□ -0.5
SSBP3-206ENST00000420121 EXOC7Q9UPT5 735 aa11.94□□□□□ -0.5
SSBP3-206ENST00000420121 F5P12259 2224 aa11.94□□□□□ -0.5
SSBP3-206ENST00000420121 RIF1Q5UIP0 2472 aaKnown RBP11.94□□□□□ -0.5
SSBP3-206ENST00000420121 PTPRJQ12913 1337 aa11.93□□□□□ -0.5
SSBP3-206ENST00000420121 ZNF292O60281 2723 aa11.93□□□□□ -0.5
SSBP3-206ENST00000420121 GOLGA8IPA6NC78 632 aa11.93□□□□□ -0.5
SSBP3-206ENST00000420121 GOLGA8JA6NMD2 632 aa11.93□□□□□ -0.5
SSBP3-206ENST00000420121 LRRN2O75325 713 aa11.93□□□□□ -0.5
SSBP3-206ENST00000420121 SOAT2O75908 522 aa11.93□□□□□ -0.5
SSBP3-206ENST00000420121 NBL1P41271 181 aa11.93□□□□□ -0.5
SSBP3-206ENST00000420121 TAF6P49848 677 aa11.93□□□□□ -0.5
SSBP3-206ENST00000420121 FOXD4L6Q3SYB3 417 aaPredicted RBP11.93□□□□□ -0.5
SSBP3-206ENST00000420121 WSCD1Q658N2 575 aa11.93□□□□□ -0.5
SSBP3-206ENST00000420121 FOXD4L3Q6VB84 417 aaPredicted RBP11.93□□□□□ -0.5
SSBP3-206ENST00000420121 PDZD4Q76G19 769 aaPredicted RBP11.93□□□□□ -0.5
SSBP3-206ENST00000420121 LRRTM3Q86VH5 581 aa11.93□□□□□ -0.5
SSBP3-206ENST00000420121 NT5DC4Q86YG4 428 aa11.93□□□□□ -0.5
SSBP3-206ENST00000420121 HSCBQ8IWL3 235 aa11.93□□□□□ -0.5
SSBP3-206ENST00000420121 CCDC65Q8IXS2 484 aa11.93□□□□□ -0.5
SSBP3-206ENST00000420121 C1orf127Q8N9H9 656 aa11.93□□□□□ -0.5
SSBP3-206ENST00000420121 SHKBP1Q8TBC3 707 aa11.93□□□□□ -0.5
SSBP3-206ENST00000420121 ELSPBP1Q96BH3 223 aa11.93□□□□□ -0.5
SSBP3-206ENST00000420121 DHX58Q96C10 678 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms