RNA–Protein interactions for RNA: ENST00000418188.1

CSPG4P3Y-201, Transcript of CSPG4 pseudogene 3 Y-linked, humanhuman

BASIC

Gene CSPG4P3Y, Length 3,724 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P3Y-201ENST00000418188 CREB1P16220 341 aa12.38□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 NR1H3Q13133 447 aa12.38□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 RHBDF2Q6PJF5 856 aa12.38□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 ERICH1Q86X53 443 aa12.38□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 ASAP3Q8TDY4 903 aa12.38□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 KLHL29Q96CT2 875 aa12.38□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 PITPNM3Q9BZ71 974 aa12.38□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.38□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 SPATA31C2B4DYI2 1134 aa12.38□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 C19orf81C9J6K1 198 aa12.38□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 O00370 1275 aa12.38□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 EGFRP00533 1210 aa12.38□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 GLRA2P23416 452 aa12.38□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 AP3M2P53677 418 aa12.38□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 TFAMQ00059 246 aaKnown RBP12.38□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 SETDB1Q15047 1291 aa12.38□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 E2F5Q15329 346 aa12.38□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 HP1BP3Q5SSJ5 553 aaPredicted RBP12.38□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 PLEKHA7Q6IQ23 1121 aa12.38□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 ZBED3Q96IU2 234 aaPredicted RBP12.38□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 NUB1Q9Y5A7 615 aa12.38□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 TMEM191BP0C7N4 346 aa12.37□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 RPS12P25398 132 aaKnown RBP12.37□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 IVDP26440 423 aa12.37□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 POLR2BP30876 1174 aaKnown RBP12.37□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 LACTBP83111 547 aaPredicted RBP12.37□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 TMEM132BQ14DG7 1078 aa12.37□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 DALRD3Q5D0E6 543 aaKnown RBP12.37□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 PRAMEF18Q5VWM3 479 aa12.37□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 FAM160B1Q5W0V3 765 aa12.37□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 ZBTB8OSQ8IWT0 167 aa12.37□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 SMC6Q96SB8 1091 aa12.37□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 HERPUD2Q9BSE4 406 aa12.37□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 APOBEC3GQ9HC16 384 aaKnown RBP12.37□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 ABCF3Q9NUQ8 709 aa12.37□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 VNN1O95497 513 aa12.37□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 CFHP08603 1231 aa12.37□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 CENPUQ71F23 418 aa12.37□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 RIBC1Q8N443 379 aaPredicted RBP12.37□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 OR5B17Q8NGF7 314 aa12.37□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 FBF1Q8TES7 1133 aa12.37□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 MTFR1LQ9H019 292 aa12.37□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 PDLIM7Q9NR12 457 aa12.37□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 ZNF214Q9UL59 606 aaPredicted RBP12.37□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 FAM47DPA6NHR8 397 aa12.37□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 RGS20O76081 388 aa12.37□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 SRGAP2CP0DJJ0 459 aa12.37□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 PTPRAP18433 802 aa12.37□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 RPL7AP62424 266 aaKnown RBP12.37□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 PRKG1Q13976 671 aa12.37□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 DUOXA2Q1HG44 320 aa12.37□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 SCARA5Q6ZMJ2 495 aa12.37□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 PRUNE1Q86TP1 453 aa12.37□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 ZCCHC9Q8N567 271 aaKnown RBP12.37□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 CKAP2Q8WWK9 683 aa12.37□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 TBC1D31Q96DN5 1066 aa12.37□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 DNPEPQ9ULA0 475 aa12.37□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 TPX2Q9ULW0 747 aaKnown RBP12.37□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 TELO2Q9Y4R8 837 aa12.37□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 BRWD3Q6RI45 1802 aa12.37□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 UMODL1Q5DID0 1318 aa12.36□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 A0A0B4J269 797 aa12.36□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 GOLGA8SH3BPF8 625 aa12.36□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 UBOX5O94941 541 aa12.36□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 ACO1P21399 889 aaKnown RBP12.36□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 RFC5P40937 340 aa12.36□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 CLDN10P78369 228 aa12.36□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 MCL1Q07820 350 aa12.36□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 KLF1Q13351 362 aaPredicted RBP12.36□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 ATP13A4Q4VNC1 1196 aa12.36□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 ZBTB41Q5SVQ8 909 aa12.36□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 MFSD7Q6UXD7 560 aa12.36□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 FAM47EQ6ZV65 393 aa12.36□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 ZBED8Q8IZ13 594 aa12.36□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 MRPL4Q9BYD3 311 aaKnown RBP12.36□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 FOXO6A8MYZ6 492 aa12.36□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 KRT19P08727 400 aa12.36□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 GMPSP49915 693 aaPredicted RBP12.36□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 STAT5BP51692 787 aa12.36□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 EFNA5P52803 228 aa12.36□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 YWHAEP62258 255 aaKnown RBP12.36□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 DYNLT1P63172 113 aa12.36□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 TAP1Q03518 808 aa12.36□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 PIGHQ14442 188 aaPredicted RBP12.36□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 HADHQ16836 314 aaKnown RBP12.36□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 TNFAIP8L3Q5GJ75 292 aa12.36□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 VSTM1Q6UX27 236 aa12.36□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 MAGEB18Q96M61 343 aa12.36□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 ECT2Q9H8V3 914 aa12.36□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 DDX56Q9NY93 547 aaKnown RBP12.36□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 IVNS1ABPQ9Y6Y0 642 aa12.36□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 PTPRJQ12913 1337 aa12.36□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 STBD1O95210 358 aa12.36□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 GH1P01241 217 aa12.36□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 MMP8P22894 467 aa12.36□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 BRD2P25440 801 aaKnown RBP12.36□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 ALDH3A1P30838 453 aa12.36□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 MCCD1P59942 119 aaPredicted RBP12.36□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 NEDD9Q14511 834 aa12.36□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 EAPPQ56P03 285 aaPredicted RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms