RNA–Protein interactions for RNA: ENST00000417946.5

CPS1-202, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 3

Gene CPS1, Length 699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-202ENST00000417946 POLIQ9UNA4 740 aa7.36□□□□□ -1.23
CPS1-202ENST00000417946 ZKSCAN5Q9Y2L8 839 aa7.36□□□□□ -1.23
CPS1-202ENST00000417946 LUC7L2Q9Y383 392 aaKnown RBP7.36□□□□□ -1.23
CPS1-202ENST00000417946 NME7Q9Y5B8 376 aa7.36□□□□□ -1.23
CPS1-202ENST00000417946 MKI67P46013 3256 aaKnown RBP7.35□□□□□ -1.23
CPS1-202ENST00000417946 A0A0U1RQJ8 604 aa7.35□□□□□ -1.23
CPS1-202ENST00000417946 ARL5CA6NH57 179 aa7.35□□□□□ -1.23
CPS1-202ENST00000417946 GOLGA6L6A8MZA4 724 aa7.35□□□□□ -1.23
CPS1-202ENST00000417946 FOXN3O00409 490 aaPredicted RBP7.35□□□□□ -1.23
CPS1-202ENST00000417946 PIRO00625 290 aa7.35□□□□□ -1.23
CPS1-202ENST00000417946 ENPP3O14638 875 aa7.35□□□□□ -1.23
CPS1-202ENST00000417946 ZNF263O14978 683 aa7.35□□□□□ -1.23
CPS1-202ENST00000417946 SPTLC1O15269 473 aa7.35□□□□□ -1.23
CPS1-202ENST00000417946 CALCAP01258 141 aa7.35□□□□□ -1.23
CPS1-202ENST00000417946 TNNC2P02585 160 aa7.35□□□□□ -1.23
CPS1-202ENST00000417946 ITGB3P05106 788 aa7.35□□□□□ -1.23
CPS1-202ENST00000417946 PTMAP06454 111 aaKnown RBP7.35□□□□□ -1.23
CPS1-202ENST00000417946 TMEM191BP0C7N4 346 aa7.35□□□□□ -1.23
CPS1-202ENST00000417946 SKILP12757 684 aa7.35□□□□□ -1.23
CPS1-202ENST00000417946 ITGA4P13612 1032 aa7.35□□□□□ -1.23
CPS1-202ENST00000417946 RFX1P22670 979 aa7.35□□□□□ -1.23
CPS1-202ENST00000417946 LRPAP1P30533 357 aa7.35□□□□□ -1.23
CPS1-202ENST00000417946 POLR2BP30876 1174 aaKnown RBP7.35□□□□□ -1.23
CPS1-202ENST00000417946 PRKCIP41743 596 aa7.35□□□□□ -1.23
CPS1-202ENST00000417946 PIK3CAP42336 1068 aa7.35□□□□□ -1.23
CPS1-202ENST00000417946 GATMP50440 423 aa7.35□□□□□ -1.23
CPS1-202ENST00000417946 SCNN1GP51170 649 aa7.35□□□□□ -1.23
CPS1-202ENST00000417946 ZNF132P52740 706 aa7.35□□□□□ -1.23
CPS1-202ENST00000417946 GCNT1Q02742 428 aa7.35□□□□□ -1.23
CPS1-202ENST00000417946 NCBP1Q09161 790 aaKnown RBP7.35□□□□□ -1.23
CPS1-202ENST00000417946 BIRC3Q13489 604 aa7.35□□□□□ -1.23
CPS1-202ENST00000417946 DRAP1Q14919 205 aaPredicted RBP7.35□□□□□ -1.23
CPS1-202ENST00000417946 APBB1IPQ7Z5R6 666 aaPredicted RBP7.35□□□□□ -1.23
CPS1-202ENST00000417946 USP37Q86T82 979 aa7.35□□□□□ -1.23
CPS1-202ENST00000417946 NT5DC4Q86YG4 428 aa7.35□□□□□ -1.23
CPS1-202ENST00000417946 FAM71AQ8IYT1 594 aa7.35□□□□□ -1.23
CPS1-202ENST00000417946 TNS4Q8IZW8 715 aa7.35□□□□□ -1.23
CPS1-202ENST00000417946 C3orf58Q8NDZ4 430 aa7.35□□□□□ -1.23
CPS1-202ENST00000417946 OR8K1Q8NGG5 319 aa7.35□□□□□ -1.23
CPS1-202ENST00000417946 KIAA1524Q8TCG1 905 aa7.35□□□□□ -1.23
CPS1-202ENST00000417946 ATRIPQ8WXE1 791 aa7.35□□□□□ -1.23
CPS1-202ENST00000417946 SYN2Q92777 582 aaPredicted RBP7.35□□□□□ -1.23
CPS1-202ENST00000417946 PCMTD1Q96MG8 357 aaPredicted RBP7.35□□□□□ -1.23
CPS1-202ENST00000417946 NT5C1BQ96P26 610 aa7.35□□□□□ -1.23
CPS1-202ENST00000417946 ZSWIM1Q9BR11 485 aa7.35□□□□□ -1.23
CPS1-202ENST00000417946 STK33Q9BYT3 514 aa7.35□□□□□ -1.23
CPS1-202ENST00000417946 BCO2Q9BYV7 579 aa7.35□□□□□ -1.23
CPS1-202ENST00000417946 RC3H2Q9HBD1 1191 aaKnown RBP7.35□□□□□ -1.23
CPS1-202ENST00000417946 DPP3Q9NY33 737 aa7.35□□□□□ -1.23
CPS1-202ENST00000417946 PARP2Q9UGN5 583 aa7.35□□□□□ -1.23
CPS1-202ENST00000417946 NOCTQ9UK39 431 aaKnown RBP7.35□□□□□ -1.23
CPS1-202ENST00000417946 ITGA11Q9UKX5 1188 aa7.35□□□□□ -1.23
CPS1-202ENST00000417946 MYO6Q9UM54 1294 aa7.35□□□□□ -1.23
CPS1-202ENST00000417946 CNTN6Q9UQ52 1028 aa7.35□□□□□ -1.23
CPS1-202ENST00000417946 GIT1Q9Y2X7 761 aa7.35□□□□□ -1.23
CPS1-202ENST00000417946 DAAM1Q9Y4D1 1078 aa7.35□□□□□ -1.23
CPS1-202ENST00000417946 USP27XA6NNY8 438 aa7.34□□□□□ -1.23
CPS1-202ENST00000417946 OFD1O75665 1012 aa7.34□□□□□ -1.23
CPS1-202ENST00000417946 DXOO77932 396 aaKnown RBP7.34□□□□□ -1.23
CPS1-202ENST00000417946 TIMP1P01033 207 aa7.34□□□□□ -1.23
CPS1-202ENST00000417946 FGFR1P11362 822 aa7.34□□□□□ -1.23
CPS1-202ENST00000417946 CHRNB2P17787 502 aa7.34□□□□□ -1.23
CPS1-202ENST00000417946 CYP3A5P20815 502 aa7.34□□□□□ -1.23
CPS1-202ENST00000417946 SOX5P35711 763 aa7.34□□□□□ -1.23
CPS1-202ENST00000417946 KCNJ6P48051 423 aa7.34□□□□□ -1.23
CPS1-202ENST00000417946 YARSP54577 528 aaKnown RBP7.34□□□□□ -1.23
CPS1-202ENST00000417946 EPHB4P54760 987 aa7.34□□□□□ -1.23
CPS1-202ENST00000417946 DSC1Q08554 894 aa7.34□□□□□ -1.23
CPS1-202ENST00000417946 CUL2Q13617 745 aa7.34□□□□□ -1.23
CPS1-202ENST00000417946 RAPGEF1Q13905 1077 aa7.34□□□□□ -1.23
CPS1-202ENST00000417946 SFMBT2Q5VUG0 894 aa7.34□□□□□ -1.23
CPS1-202ENST00000417946 C9orf57Q5W0N0 161 aa7.34□□□□□ -1.23
CPS1-202ENST00000417946 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.34□□□□□ -1.23
CPS1-202ENST00000417946 TOGARAM2Q6ZUX3 1019 aa7.34□□□□□ -1.23
CPS1-202ENST00000417946 SLC24A5Q71RS6 500 aa7.34□□□□□ -1.23
CPS1-202ENST00000417946 C16orf59Q7L2K0 433 aa7.34□□□□□ -1.23
CPS1-202ENST00000417946 ZNF571Q7Z3V5 609 aaPredicted RBP7.34□□□□□ -1.23
CPS1-202ENST00000417946 PALB2Q86YC2 1186 aa7.34□□□□□ -1.23
CPS1-202ENST00000417946 LNX1Q8TBB1 728 aaPredicted RBP7.34□□□□□ -1.23
CPS1-202ENST00000417946 WHAMMQ8TF30 809 aa7.34□□□□□ -1.23
CPS1-202ENST00000417946 SLC20A1Q8WUM9 679 aa7.34□□□□□ -1.23
CPS1-202ENST00000417946 DDX1Q92499 740 aaKnown RBP7.34□□□□□ -1.23
CPS1-202ENST00000417946 SEPT8Q92599 483 aa7.34□□□□□ -1.23
CPS1-202ENST00000417946 ANKRD36BP1Q96IX9 119 aa7.34□□□□□ -1.23
CPS1-202ENST00000417946 TWNKQ96RR1 684 aa7.34□□□□□ -1.23
CPS1-202ENST00000417946 TSPAN18Q96SJ8 248 aa7.34□□□□□ -1.23
CPS1-202ENST00000417946 BAG1Q99933 345 aaPredicted RBP7.34□□□□□ -1.23
CPS1-202ENST00000417946 PAAF1Q9BRP4 392 aa7.34□□□□□ -1.23
CPS1-202ENST00000417946 DESI2Q9BSY9 194 aa7.34□□□□□ -1.23
CPS1-202ENST00000417946 TRIM6Q9C030 488 aaPredicted RBP7.34□□□□□ -1.23
CPS1-202ENST00000417946 NIF3L1Q9GZT8 377 aa7.34□□□□□ -1.23
CPS1-202ENST00000417946 SMYD3Q9H7B4 428 aa7.34□□□□□ -1.23
CPS1-202ENST00000417946 RSAD1Q9HA92 442 aa7.34□□□□□ -1.23
CPS1-202ENST00000417946 UBE2TQ9NPD8 197 aaPredicted RBP7.34□□□□□ -1.23
CPS1-202ENST00000417946 ACP6Q9NPH0 428 aa7.34□□□□□ -1.23
CPS1-202ENST00000417946 C1orf112Q9NSG2 853 aa7.34□□□□□ -1.23
CPS1-202ENST00000417946 TMEM39AQ9NV64 488 aa7.34□□□□□ -1.23
CPS1-202ENST00000417946 TMEM161AQ9NX61 479 aa7.34□□□□□ -1.23
CPS1-202ENST00000417946 HMGXB4Q9UGU5 601 aa7.34□□□□□ -1.23
CPS1-202ENST00000417946 UBQLN1Q9UMX0 589 aaKnown RBP7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms