RNA–Protein interactions for RNA: ENST00000417814.3

TNFRSF8-203, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 3,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-203ENST00000417814 KCTD6Q8NC69 237 aa13.94□□□□□ -0.18
TNFRSF8-203ENST00000417814 HELQQ8TDG4 1101 aa13.94□□□□□ -0.18
TNFRSF8-203ENST00000417814 ZNF516Q92618 1163 aa13.94□□□□□ -0.18
TNFRSF8-203ENST00000417814 DDX50Q9BQ39 737 aaKnown RBP13.94□□□□□ -0.18
TNFRSF8-203ENST00000417814 TRAIPQ9BWF2 469 aa13.94□□□□□ -0.18
TNFRSF8-203ENST00000417814 MAK16Q9BXY0 300 aaKnown RBP13.94□□□□□ -0.18
TNFRSF8-203ENST00000417814 PCDHA10Q9Y5I2 948 aa13.94□□□□□ -0.18
TNFRSF8-203ENST00000417814 CIITAP33076 1130 aa13.93□□□□□ -0.18
TNFRSF8-203ENST00000417814 MYL6P60660 151 aa13.93□□□□□ -0.18
TNFRSF8-203ENST00000417814 MKRN3Q13064 507 aaKnown RBP13.93□□□□□ -0.18
TNFRSF8-203ENST00000417814 PPP2R5EQ16537 467 aa13.93□□□□□ -0.18
TNFRSF8-203ENST00000417814 WDR72Q3MJ13 1102 aa13.93□□□□□ -0.18
TNFRSF8-203ENST00000417814 AP1ARQ63HQ0 302 aa13.93□□□□□ -0.18
TNFRSF8-203ENST00000417814 ZCCHC23Q6ZST2 131 aa13.93□□□□□ -0.18
TNFRSF8-203ENST00000417814 USP37Q86T82 979 aa13.93□□□□□ -0.18
TNFRSF8-203ENST00000417814 NCAPG2Q86XI2 1143 aa13.93□□□□□ -0.18
TNFRSF8-203ENST00000417814 RHOT1Q8IXI2 618 aa13.93□□□□□ -0.18
TNFRSF8-203ENST00000417814 TMEM161BQ8NDZ6 487 aa13.93□□□□□ -0.18
TNFRSF8-203ENST00000417814 FAM111AQ96PZ2 611 aa13.93□□□□□ -0.18
TNFRSF8-203ENST00000417814 MIS12Q9H081 205 aa13.93□□□□□ -0.18
TNFRSF8-203ENST00000417814 DNAJC5Q9H3Z4 198 aa13.93□□□□□ -0.18
TNFRSF8-203ENST00000417814 SEPT10Q9P0V9 454 aa13.93□□□□□ -0.18
TNFRSF8-203ENST00000417814 NKX1-2Q9UD57 310 aaPredicted RBP13.93□□□□□ -0.18
TNFRSF8-203ENST00000417814 NUB1Q9Y5A7 615 aa13.93□□□□□ -0.18
TNFRSF8-203ENST00000417814 A0A1B0GUL6 1792 aa13.93□□□□□ -0.18
TNFRSF8-203ENST00000417814 UBR2Q8IWV8 1755 aa13.93□□□□□ -0.18
TNFRSF8-203ENST00000417814 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.93□□□□□ -0.18
TNFRSF8-203ENST00000417814 FAM47DPA6NHR8 397 aa13.93□□□□□ -0.18
TNFRSF8-203ENST00000417814 HOXA10P31260 410 aaPredicted RBP13.93□□□□□ -0.18
TNFRSF8-203ENST00000417814 MMRN1Q13201 1228 aa13.93□□□□□ -0.18
TNFRSF8-203ENST00000417814 NCOA4Q13772 614 aa13.93□□□□□ -0.18
TNFRSF8-203ENST00000417814 TTLL12Q14166 644 aaPredicted RBP13.93□□□□□ -0.18
TNFRSF8-203ENST00000417814 PGM2Q96G03 612 aa13.93□□□□□ -0.18
TNFRSF8-203ENST00000417814 MECRQ9BV79 373 aa13.93□□□□□ -0.18
TNFRSF8-203ENST00000417814 TMEM8AQ9HCN3 771 aa13.93□□□□□ -0.18
TNFRSF8-203ENST00000417814 IL1RAPL1Q9NZN1 696 aa13.93□□□□□ -0.18
TNFRSF8-203ENST00000417814 PTPRJQ12913 1337 aa13.93□□□□□ -0.18
TNFRSF8-203ENST00000417814 GTPBP10A4D1E9 387 aaKnown RBP13.93□□□□□ -0.18
TNFRSF8-203ENST00000417814 SPDYE2BA6NHP3 402 aa13.93□□□□□ -0.18
TNFRSF8-203ENST00000417814 ARHGAP42A6NI28 874 aa13.93□□□□□ -0.18
TNFRSF8-203ENST00000417814 SPDYE6P0CI01 402 aa13.93□□□□□ -0.18
TNFRSF8-203ENST00000417814 ATP5DP30049 168 aa13.93□□□□□ -0.18
TNFRSF8-203ENST00000417814 WDR4P57081 412 aaKnown RBP13.93□□□□□ -0.18
TNFRSF8-203ENST00000417814 CYP24A1Q07973 514 aa13.93□□□□□ -0.18
TNFRSF8-203ENST00000417814 CLEC16AQ2KHT3 1053 aa13.93□□□□□ -0.18
TNFRSF8-203ENST00000417814 NBPF12Q5TAG4 269 aaPredicted RBP13.93□□□□□ -0.18
TNFRSF8-203ENST00000417814 TATDN1Q6P1N9 297 aa13.93□□□□□ -0.18
TNFRSF8-203ENST00000417814 DARS2Q6PI48 645 aaKnown RBP13.93□□□□□ -0.18
TNFRSF8-203ENST00000417814 ART4Q93070 314 aa13.93□□□□□ -0.18
TNFRSF8-203ENST00000417814 CYP4F11Q9HBI6 524 aa13.93□□□□□ -0.18
TNFRSF8-203ENST00000417814 DMAC2Q9NW81 257 aa13.93□□□□□ -0.18
TNFRSF8-203ENST00000417814 ZFP69BQ9UJL9 534 aa13.93□□□□□ -0.18
TNFRSF8-203ENST00000417814 TXNDC9O14530 226 aa13.92□□□□□ -0.18
TNFRSF8-203ENST00000417814 CDH16O75309 829 aa13.92□□□□□ -0.18
TNFRSF8-203ENST00000417814 TMEM191BP0C7N4 346 aa13.92□□□□□ -0.18
TNFRSF8-203ENST00000417814 ITIH2P19823 946 aa13.92□□□□□ -0.18
TNFRSF8-203ENST00000417814 HSPA1LP34931 641 aa13.92□□□□□ -0.18
TNFRSF8-203ENST00000417814 GMPRP36959 345 aa13.92□□□□□ -0.18
TNFRSF8-203ENST00000417814 ABCG1P45844 678 aa13.92□□□□□ -0.18
TNFRSF8-203ENST00000417814 BMT2Q1RMZ1 405 aa13.92□□□□□ -0.18
TNFRSF8-203ENST00000417814 ANKRD22Q5VYY1 191 aa13.92□□□□□ -0.18
TNFRSF8-203ENST00000417814 TDRD10Q5VZ19 366 aaKnown RBP13.92□□□□□ -0.18
TNFRSF8-203ENST00000417814 TTLL6Q8N841 843 aa13.92□□□□□ -0.18
TNFRSF8-203ENST00000417814 FAXDC2Q96IV6 333 aa13.92□□□□□ -0.18
TNFRSF8-203ENST00000417814 WRNIP1Q96S55 665 aa13.92□□□□□ -0.18
TNFRSF8-203ENST00000417814 SLC17A7Q9P2U7 560 aa13.92□□□□□ -0.18
TNFRSF8-203ENST00000417814 POLIQ9UNA4 740 aa13.92□□□□□ -0.18
TNFRSF8-203ENST00000417814 TOP3BO95985 862 aaKnown RBP13.92□□□□□ -0.18
TNFRSF8-203ENST00000417814 ASNSP08243 561 aa13.92□□□□□ -0.18
TNFRSF8-203ENST00000417814 CCNHP51946 323 aaPredicted RBP13.92□□□□□ -0.18
TNFRSF8-203ENST00000417814 POLE2P56282 527 aa13.92□□□□□ -0.18
TNFRSF8-203ENST00000417814 TMEM62Q0P6H9 643 aa13.92□□□□□ -0.18
TNFRSF8-203ENST00000417814 CFAP61Q8NHU2 1237 aa13.92□□□□□ -0.18
TNFRSF8-203ENST00000417814 ACTL9Q8TC94 416 aa13.92□□□□□ -0.18
TNFRSF8-203ENST00000417814 GRK7Q8WTQ7 553 aa13.92□□□□□ -0.18
TNFRSF8-203ENST00000417814 SLC7A3Q8WY07 619 aa13.92□□□□□ -0.18
TNFRSF8-203ENST00000417814 SHC3Q92529 594 aa13.92□□□□□ -0.18
TNFRSF8-203ENST00000417814 UNKQ9C0B0 810 aaKnown RBP13.92□□□□□ -0.18
TNFRSF8-203ENST00000417814 KDM4CQ9H3R0 1056 aa13.92□□□□□ -0.18
TNFRSF8-203ENST00000417814 SPATS2LQ9NUQ6 558 aaKnown RBP13.92□□□□□ -0.18
TNFRSF8-203ENST00000417814 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.92□□□□□ -0.18
TNFRSF8-203ENST00000417814 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.92□□□□□ -0.18
TNFRSF8-203ENST00000417814 MROH7Q68CQ1 1323 aa13.92□□□□□ -0.18
TNFRSF8-203ENST00000417814 STAM2O75886 525 aa13.92□□□□□ -0.18
TNFRSF8-203ENST00000417814 ENO1P06733 434 aaKnown RBP13.92□□□□□ -0.18
TNFRSF8-203ENST00000417814 PSMC1P62191 440 aaKnown RBP13.92□□□□□ -0.18
TNFRSF8-203ENST00000417814 SPARCL1Q14515 664 aa13.92□□□□□ -0.18
TNFRSF8-203ENST00000417814 PDCD7Q8N8D1 485 aaKnown RBP13.92□□□□□ -0.18
TNFRSF8-203ENST00000417814 CERKQ8TCT0 537 aa13.92□□□□□ -0.18
TNFRSF8-203ENST00000417814 PRR11Q96HE9 360 aaPredicted RBP13.92□□□□□ -0.18
TNFRSF8-203ENST00000417814 PDCD2LQ9BRP1 358 aa13.92□□□□□ -0.18
TNFRSF8-203ENST00000417814 PPARGC1AQ9UBK2 798 aaKnown RBP13.92□□□□□ -0.18
TNFRSF8-203ENST00000417814 INPP5FQ9Y2H2 1132 aa13.92□□□□□ -0.18
TNFRSF8-203ENST00000417814 NCANO14594 1321 aa13.92□□□□□ -0.18
TNFRSF8-203ENST00000417814 MT-ND3P03897 115 aa13.91□□□□□ -0.18
TNFRSF8-203ENST00000417814 ATP2A2P16615 1042 aaKnown RBP13.91□□□□□ -0.18
TNFRSF8-203ENST00000417814 GDF10P55107 478 aa13.91□□□□□ -0.18
TNFRSF8-203ENST00000417814 CRADDP78560 199 aa13.91□□□□□ -0.18
TNFRSF8-203ENST00000417814 OTUD4Q01804 1114 aaKnown RBP13.91□□□□□ -0.18
TNFRSF8-203ENST00000417814 RAB6CQ53S08 254 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms