RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 CLP1Q92989 425 aaKnown RBP9.07□□□□□ -0.96
TRIM48-201ENST00000417545 SPAG5Q96R06 1193 aa9.07□□□□□ -0.96
TRIM48-201ENST00000417545 GRPEL1Q9HAV7 217 aa9.07□□□□□ -0.96
TRIM48-201ENST00000417545 FAM207AQ9NSI2 230 aaPredicted RBP9.07□□□□□ -0.96
TRIM48-201ENST00000417545 PCDHB8Q9UN66 801 aa9.07□□□□□ -0.96
TRIM48-201ENST00000417545 POLIQ9UNA4 740 aa9.07□□□□□ -0.96
TRIM48-201ENST00000417545 SSX2IPQ9Y2D8 614 aa9.07□□□□□ -0.96
TRIM48-201ENST00000417545 COQ4Q9Y3A0 265 aa9.07□□□□□ -0.96
TRIM48-201ENST00000417545 PLXNA4Q9HCM2 1894 aa9.07□□□□□ -0.96
TRIM48-201ENST00000417545 TNRC18O15417 2968 aaPredicted RBP9.07□□□□□ -0.96
TRIM48-201ENST00000417545 C2CD2LO14523 706 aa9.06□□□□□ -0.96
TRIM48-201ENST00000417545 SYN3O14994 580 aa9.06□□□□□ -0.96
TRIM48-201ENST00000417545 STAU1O95793 577 aaKnown RBP9.06□□□□□ -0.96
TRIM48-201ENST00000417545 SOD2P04179 222 aa9.06□□□□□ -0.96
TRIM48-201ENST00000417545 KRT5P13647 590 aa9.06□□□□□ -0.96
TRIM48-201ENST00000417545 RFX1P22670 979 aa9.06□□□□□ -0.96
TRIM48-201ENST00000417545 TSPY1Q01534 308 aa9.06□□□□□ -0.96
TRIM48-201ENST00000417545 CREMQ03060 361 aa9.06□□□□□ -0.96
TRIM48-201ENST00000417545 TAP1Q03518 808 aa9.06□□□□□ -0.96
TRIM48-201ENST00000417545 YWHAHQ04917 246 aaPredicted RBP9.06□□□□□ -0.96
TRIM48-201ENST00000417545 PTPROQ16827 1216 aa9.06□□□□□ -0.96
TRIM48-201ENST00000417545 ARHGAP44Q17R89 818 aa9.06□□□□□ -0.96
TRIM48-201ENST00000417545 LRIT3Q3SXY7 679 aa9.06□□□□□ -0.96
TRIM48-201ENST00000417545 TIGD5Q53EQ6 642 aa9.06□□□□□ -0.96
TRIM48-201ENST00000417545 ZNF697Q5TEC3 545 aa9.06□□□□□ -0.96
TRIM48-201ENST00000417545 OVOS1Q6IE37 1185 aa9.06□□□□□ -0.96
TRIM48-201ENST00000417545 ZNF280DQ6N043 979 aa9.06□□□□□ -0.96
TRIM48-201ENST00000417545 SARM1Q6SZW1 724 aa9.06□□□□□ -0.96
TRIM48-201ENST00000417545 RRAGAQ7L523 313 aa9.06□□□□□ -0.96
TRIM48-201ENST00000417545 ENOSF1Q7L5Y1 443 aa9.06□□□□□ -0.96
TRIM48-201ENST00000417545 TMC7Q7Z402 723 aa9.06□□□□□ -0.96
TRIM48-201ENST00000417545 DDX53Q86TM3 631 aaKnown RBP9.06□□□□□ -0.96
TRIM48-201ENST00000417545 VPS52Q8N1B4 723 aa9.06□□□□□ -0.96
TRIM48-201ENST00000417545 TMEM86AQ8N2M4 240 aa9.06□□□□□ -0.96
TRIM48-201ENST00000417545 TOP6BLQ8N6T0 577 aa9.06□□□□□ -0.96
TRIM48-201ENST00000417545 C3orf58Q8NDZ4 430 aa9.06□□□□□ -0.96
TRIM48-201ENST00000417545 ZNF397Q8NF99 534 aaPredicted RBP9.06□□□□□ -0.96
TRIM48-201ENST00000417545 RIN2Q8WYP3 895 aaPredicted RBP9.06□□□□□ -0.96
TRIM48-201ENST00000417545 SEMA4DQ92854 862 aa9.06□□□□□ -0.96
TRIM48-201ENST00000417545 SUSD3Q96L08 255 aa9.06□□□□□ -0.96
TRIM48-201ENST00000417545 NAP1L5Q96NT1 182 aaPredicted RBP9.06□□□□□ -0.96
TRIM48-201ENST00000417545 ERGIC2Q96RQ1 377 aa9.06□□□□□ -0.96
TRIM48-201ENST00000417545 TTPALQ9BTX7 342 aa9.06□□□□□ -0.96
TRIM48-201ENST00000417545 NUP58Q9BVL2 599 aa9.06□□□□□ -0.96
TRIM48-201ENST00000417545 HERC2P3Q9BVR0 1158 aa9.06□□□□□ -0.96
TRIM48-201ENST00000417545 UBE2TQ9NPD8 197 aaPredicted RBP9.06□□□□□ -0.96
TRIM48-201ENST00000417545 MRPL17Q9NRX2 175 aaKnown RBP9.06□□□□□ -0.96
TRIM48-201ENST00000417545 MARCH5Q9NX47 278 aa9.06□□□□□ -0.96
TRIM48-201ENST00000417545 APEX2Q9UBZ4 518 aa9.06□□□□□ -0.96
TRIM48-201ENST00000417545 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.06□□□□□ -0.96
TRIM48-201ENST00000417545 TIMM13Q9Y5L4 95 aaPredicted RBP9.06□□□□□ -0.96
TRIM48-201ENST00000417545 COL4A4P53420 1690 aaPredicted RBP9.06□□□□□ -0.96
TRIM48-201ENST00000417545 TSC2P49815 1807 aa9.06□□□□□ -0.96
TRIM48-201ENST00000417545 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.05□□□□□ -0.96
TRIM48-201ENST00000417545 A0A1W2PQC6 194 aa9.05□□□□□ -0.96
TRIM48-201ENST00000417545 LRRC10BA6NIK2 292 aa9.05□□□□□ -0.96
TRIM48-201ENST00000417545 F8W810 466 aa9.05□□□□□ -0.96
TRIM48-201ENST00000417545 TEX33O43247 280 aa9.05□□□□□ -0.96
TRIM48-201ENST00000417545 ITGB1P05556 798 aa9.05□□□□□ -0.96
TRIM48-201ENST00000417545 CPB1P15086 417 aa9.05□□□□□ -0.96
TRIM48-201ENST00000417545 PON1P27169 355 aa9.05□□□□□ -0.96
TRIM48-201ENST00000417545 PCSK1P29120 753 aa9.05□□□□□ -0.96
TRIM48-201ENST00000417545 TKTP29401 623 aaKnown RBP9.05□□□□□ -0.96
TRIM48-201ENST00000417545 RAP1GAPP47736 663 aa9.05□□□□□ -0.96
TRIM48-201ENST00000417545 LHX1P48742 406 aa9.05□□□□□ -0.96
TRIM48-201ENST00000417545 MRE11P49959 708 aa9.05□□□□□ -0.96
TRIM48-201ENST00000417545 ARPP19P56211 112 aa9.05□□□□□ -0.96
TRIM48-201ENST00000417545 ERVK-21P61565 698 aa9.05□□□□□ -0.96
TRIM48-201ENST00000417545 PLCB3Q01970 1234 aa9.05□□□□□ -0.96
TRIM48-201ENST00000417545 UBE3AQ05086 875 aa9.05□□□□□ -0.96
TRIM48-201ENST00000417545 CUL2Q13617 745 aa9.05□□□□□ -0.96
TRIM48-201ENST00000417545 TRIM14Q14142 442 aa9.05□□□□□ -0.96
TRIM48-201ENST00000417545 SMC1AQ14683 1233 aaKnown RBP9.05□□□□□ -0.96
TRIM48-201ENST00000417545 NR1I3Q14994 352 aa9.05□□□□□ -0.96
TRIM48-201ENST00000417545 PSMD5Q16401 504 aa9.05□□□□□ -0.96
TRIM48-201ENST00000417545 TSR1Q2NL82 804 aaKnown RBP9.05□□□□□ -0.96
TRIM48-201ENST00000417545 CTXN3Q4LDR2 81 aa9.05□□□□□ -0.96
TRIM48-201ENST00000417545 PLPP4Q5VZY2 271 aa9.05□□□□□ -0.96
TRIM48-201ENST00000417545 ANKS3Q6ZW76 656 aa9.05□□□□□ -0.96
TRIM48-201ENST00000417545 DPH6Q7L8W6 267 aa9.05□□□□□ -0.96
TRIM48-201ENST00000417545 TMC6Q7Z403 805 aa9.05□□□□□ -0.96
TRIM48-201ENST00000417545 TMEM173Q86WV6 379 aaPredicted RBP9.05□□□□□ -0.96
TRIM48-201ENST00000417545 FMNL3Q8IVF7 1028 aa9.05□□□□□ -0.96
TRIM48-201ENST00000417545 ARHGEF19Q8IW93 802 aa9.05□□□□□ -0.96
TRIM48-201ENST00000417545 GDPD5Q8WTR4 605 aa9.05□□□□□ -0.96
TRIM48-201ENST00000417545 POF1BQ8WVV4 589 aa9.05□□□□□ -0.96
TRIM48-201ENST00000417545 TATDN2Q93075 761 aa9.05□□□□□ -0.96
TRIM48-201ENST00000417545 PPP2R3CQ969Q6 453 aa9.05□□□□□ -0.96
TRIM48-201ENST00000417545 ELMO3Q96BJ8 720 aa9.05□□□□□ -0.96
TRIM48-201ENST00000417545 IQCDQ96DY2 449 aa9.05□□□□□ -0.96
TRIM48-201ENST00000417545 PRO3102Q9H379 93 aa9.05□□□□□ -0.96
TRIM48-201ENST00000417545 SMYD3Q9H7B4 428 aa9.05□□□□□ -0.96
TRIM48-201ENST00000417545 VRTNQ9H8Y1 702 aa9.05□□□□□ -0.96
TRIM48-201ENST00000417545 CYP3A43Q9HB55 503 aa9.05□□□□□ -0.96
TRIM48-201ENST00000417545 ALG13Q9NP73 1137 aaKnown RBP9.05□□□□□ -0.96
TRIM48-201ENST00000417545 NLRC4Q9NPP4 1024 aa9.05□□□□□ -0.96
TRIM48-201ENST00000417545 TLR9Q9NR96 1032 aa9.05□□□□□ -0.96
TRIM48-201ENST00000417545 GDAP2Q9NXN4 497 aa9.05□□□□□ -0.96
TRIM48-201ENST00000417545 DNAJC12Q9UKB3 198 aa9.05□□□□□ -0.96
TRIM48-201ENST00000417545 DAAM1Q9Y4D1 1078 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms