RNA–Protein interactions for RNA: ENST00000417508.1

VPS16-204, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-204ENST00000417508 LINC00301Q8NCQ3 95 aa19.94■□□□□ 0.78
VPS16-204ENST00000417508 PJA1Q8NG27 643 aa19.94■□□□□ 0.78
VPS16-204ENST00000417508 PANK2Q9BZ23 570 aa19.94■□□□□ 0.78
VPS16-204ENST00000417508 DLGAP2Q9P1A6 1054 aa19.94■□□□□ 0.78
VPS16-204ENST00000417508 CACNA1IQ9P0X4 2223 aa19.94■□□□□ 0.78
VPS16-204ENST00000417508 TISP43B9A030 160 aa19.93■□□□□ 0.78
VPS16-204ENST00000417508 PPEF2O14830 753 aa19.93■□□□□ 0.78
VPS16-204ENST00000417508 PPP6R2O75170 966 aa19.93■□□□□ 0.78
VPS16-204ENST00000417508 GCNT3O95395 438 aa19.93■□□□□ 0.78
VPS16-204ENST00000417508 IDEP14735 1019 aa19.93■□□□□ 0.78
VPS16-204ENST00000417508 TAF6P49848 677 aa19.93■□□□□ 0.78
VPS16-204ENST00000417508 SMARCB1Q12824 385 aa19.93■□□□□ 0.78
VPS16-204ENST00000417508 DUSP4Q13115 394 aa19.93■□□□□ 0.78
VPS16-204ENST00000417508 TANGO2Q6ICL3 276 aa19.93■□□□□ 0.78
VPS16-204ENST00000417508 TMEM130Q8N3G9 435 aa19.93■□□□□ 0.78
VPS16-204ENST00000417508 E2F7Q96AV8 911 aa19.93■□□□□ 0.78
VPS16-204ENST00000417508 TCEAL4Q96EI5 215 aa19.93■□□□□ 0.78
VPS16-204ENST00000417508 SEMA4AQ9H3S1 761 aa19.93■□□□□ 0.78
VPS16-204ENST00000417508 TMEM206Q9H813 350 aa19.93■□□□□ 0.78
VPS16-204ENST00000417508 FOXD4L1Q9NU39 408 aa19.93■□□□□ 0.78
VPS16-204ENST00000417508 PANK4Q9NVE7 773 aa19.93■□□□□ 0.78
VPS16-204ENST00000417508 YIPF1Q9Y548 306 aa19.93■□□□□ 0.78
VPS16-204ENST00000417508 F5P12259 2224 aa19.92■□□□□ 0.78
VPS16-204ENST00000417508 SPTLC1O15269 473 aa19.92■□□□□ 0.78
VPS16-204ENST00000417508 SPTLC2O15270 562 aa19.92■□□□□ 0.78
VPS16-204ENST00000417508 PNPLA4P41247 253 aa19.92■□□□□ 0.78
VPS16-204ENST00000417508 CCR2P41597 374 aa19.92■□□□□ 0.78
VPS16-204ENST00000417508 MAGEA9P43362 315 aa19.92■□□□□ 0.78
VPS16-204ENST00000417508 TUFMP49411 452 aaKnown RBP19.92■□□□□ 0.78
VPS16-204ENST00000417508 FAM78AQ5JUQ0 283 aa19.92■□□□□ 0.78
VPS16-204ENST00000417508 CCDC65Q8IXS2 484 aa19.92■□□□□ 0.78
VPS16-204ENST00000417508 HS6ST3Q8IZP7 471 aa19.92■□□□□ 0.78
VPS16-204ENST00000417508 SYCP3Q8IZU3 236 aa19.92■□□□□ 0.78
VPS16-204ENST00000417508 THEM5Q8N1Q8 247 aa19.92■□□□□ 0.78
VPS16-204ENST00000417508 CACTINQ8WUQ7 758 aaKnown RBP19.92■□□□□ 0.78
VPS16-204ENST00000417508 DNASE1L2Q92874 299 aa19.92■□□□□ 0.78
VPS16-204ENST00000417508 SMARCD2Q92925 531 aa19.92■□□□□ 0.78
VPS16-204ENST00000417508 NKD2Q969F2 451 aaPredicted RBP19.92■□□□□ 0.78
VPS16-204ENST00000417508 ASB16Q96NS5 453 aa19.92■□□□□ 0.78
VPS16-204ENST00000417508 CUEDC2Q9H467 287 aa19.92■□□□□ 0.78
VPS16-204ENST00000417508 TRPV4Q9HBA0 871 aa19.92■□□□□ 0.78
VPS16-204ENST00000417508 TBC1D7Q9P0N9 293 aa19.92■□□□□ 0.78
VPS16-204ENST00000417508 CYB561D2O14569 222 aa19.91■□□□□ 0.78
VPS16-204ENST00000417508 KIAA0391O15091 583 aaKnown RBP19.91■□□□□ 0.78
VPS16-204ENST00000417508 NCAM2O15394 837 aa19.91■□□□□ 0.78
VPS16-204ENST00000417508 VNN2O95498 520 aa19.91■□□□□ 0.78
VPS16-204ENST00000417508 FGF19O95750 216 aa19.91■□□□□ 0.78
VPS16-204ENST00000417508 DCNP07585 359 aaKnown RBP19.91■□□□□ 0.78
VPS16-204ENST00000417508 OR4Q2P0C623 313 aa19.91■□□□□ 0.78
VPS16-204ENST00000417508 MYL4P12829 197 aa19.91■□□□□ 0.78
VPS16-204ENST00000417508 AMPD3Q01432 767 aa19.91■□□□□ 0.78
VPS16-204ENST00000417508 KCNA1Q09470 495 aa19.91■□□□□ 0.78
VPS16-204ENST00000417508 POTEHQ6S545 545 aa19.91■□□□□ 0.78
VPS16-204ENST00000417508 STXBP4Q6ZWJ1 553 aa19.91■□□□□ 0.78
VPS16-204ENST00000417508 C1orf210Q8IVY1 113 aa19.91■□□□□ 0.78
VPS16-204ENST00000417508 C2orf15Q8WU43 125 aaKnown RBP19.91■□□□□ 0.78
VPS16-204ENST00000417508 PGLYRP2Q96PD5 576 aa19.91■□□□□ 0.78
VPS16-204ENST00000417508 TRMT61BQ9BVS5 477 aaKnown RBP19.91■□□□□ 0.78
VPS16-204ENST00000417508 PLA2G2FQ9BZM2 168 aa19.91■□□□□ 0.78
VPS16-204ENST00000417508 TNMDQ9H2S6 317 aa19.91■□□□□ 0.78
VPS16-204ENST00000417508 TRPV5Q9NQA5 729 aa19.91■□□□□ 0.78
VPS16-204ENST00000417508 MRPS17Q9Y2R5 130 aaKnown RBP19.91■□□□□ 0.78
VPS16-204ENST00000417508 MIA3Q5JRA6 1907 aa19.91■□□□□ 0.78
VPS16-204ENST00000417508 A0A087X0B3 334 aa19.9■□□□□ 0.78
VPS16-204ENST00000417508 MTMR11A4FU01 709 aa19.9■□□□□ 0.78
VPS16-204ENST00000417508 KPNA7A9QM74 516 aa19.9■□□□□ 0.78
VPS16-204ENST00000417508 MOSPD3O75425 235 aa19.9■□□□□ 0.78
VPS16-204ENST00000417508 YEATS4O95619 227 aa19.9■□□□□ 0.78
VPS16-204ENST00000417508 PSMC3P17980 439 aa19.9■□□□□ 0.78
VPS16-204ENST00000417508 FCARP24071 287 aa19.9■□□□□ 0.78
VPS16-204ENST00000417508 SV2CQ496J9 727 aa19.9■□□□□ 0.78
VPS16-204ENST00000417508 FRMD5Q7Z6J6 570 aa19.9■□□□□ 0.78
VPS16-204ENST00000417508 ITIH5Q86UX2 942 aa19.9■□□□□ 0.78
VPS16-204ENST00000417508 BRSK2Q8IWQ3 736 aa19.9■□□□□ 0.78
VPS16-204ENST00000417508 PDILTQ8N807 584 aa19.9■□□□□ 0.78
VPS16-204ENST00000417508 ATAD1Q8NBU5 361 aa19.9■□□□□ 0.78
VPS16-204ENST00000417508 DEPDC1BQ8WUY9 529 aa19.9■□□□□ 0.78
VPS16-204ENST00000417508 IRF7Q92985 503 aa19.9■□□□□ 0.78
VPS16-204ENST00000417508 BORCS6Q96GS4 357 aa19.9■□□□□ 0.78
VPS16-204ENST00000417508 ZNF560Q96MR9 790 aa19.9■□□□□ 0.78
VPS16-204ENST00000417508 PYM1Q9BRP8 204 aaKnown RBP19.9■□□□□ 0.78
VPS16-204ENST00000417508 FAM213AQ9BRX8 229 aa19.9■□□□□ 0.78
VPS16-204ENST00000417508 LRRC3Q9BY71 257 aa19.9■□□□□ 0.78
VPS16-204ENST00000417508 BCO2Q9BYV7 579 aa19.9■□□□□ 0.78
VPS16-204ENST00000417508 FOXQ1Q9C009 403 aa19.9■□□□□ 0.78
VPS16-204ENST00000417508 ZCWPW1Q9H0M4 648 aa19.9■□□□□ 0.78
VPS16-204ENST00000417508 KBTBD4Q9NVX7 518 aa19.9■□□□□ 0.78
VPS16-204ENST00000417508 TCHHQ07283 1943 aa19.9■□□□□ 0.78
VPS16-204ENST00000417508 PRR23AA6NEV1 266 aa19.89■□□□□ 0.77
VPS16-204ENST00000417508 FAM170BA6NMN3 283 aa19.89■□□□□ 0.77
VPS16-204ENST00000417508 ZNF852Q6ZMS4 543 aa19.89■□□□□ 0.77
VPS16-204ENST00000417508 DNAJB7Q7Z6W7 309 aaPredicted RBP19.89■□□□□ 0.77
VPS16-204ENST00000417508 EFCAB13Q8IY85 973 aa19.89■□□□□ 0.77
VPS16-204ENST00000417508 IQUBQ8NA54 791 aa19.89■□□□□ 0.77
VPS16-204ENST00000417508 PSMG2Q969U7 264 aa19.89■□□□□ 0.77
VPS16-204ENST00000417508 IKZF4Q9H2S9 585 aa19.89■□□□□ 0.77
VPS16-204ENST00000417508 CRISPLD1Q9H336 500 aa19.89■□□□□ 0.77
VPS16-204ENST00000417508 BRD9Q9H8M2 597 aa19.89■□□□□ 0.77
VPS16-204ENST00000417508 TFIP11Q9UBB9 837 aaKnown RBP19.89■□□□□ 0.77
VPS16-204ENST00000417508 SLC27A5Q9Y2P5 690 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms