RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 DDX27Q96GQ7 796 aaKnown RBP19.6■□□□□ 0.73
VCP-202ENST00000417448 CORO1BQ9BR76 489 aa19.6■□□□□ 0.73
VCP-202ENST00000417448 REEP2Q9BRK0 252 aa19.6■□□□□ 0.73
VCP-202ENST00000417448 ARRDC1-AS1Q9H2J1 176 aa19.6■□□□□ 0.73
VCP-202ENST00000417448 SNTG2Q9NY99 539 aa19.6■□□□□ 0.73
VCP-202ENST00000417448 MYMKA6NI61 221 aa19.59■□□□□ 0.73
VCP-202ENST00000417448 RECQL4O94761 1208 aa19.59■□□□□ 0.73
VCP-202ENST00000417448 EDN1P05305 212 aa19.59■□□□□ 0.73
VCP-202ENST00000417448 KRT18P05783 430 aaKnown RBP19.59■□□□□ 0.73
VCP-202ENST00000417448 VIPR2P41587 438 aa19.59■□□□□ 0.73
VCP-202ENST00000417448 ROR1Q01973 937 aa19.59■□□□□ 0.73
VCP-202ENST00000417448 KIFAP3Q92845 792 aa19.59■□□□□ 0.73
VCP-202ENST00000417448 IFT74Q96LB3 600 aa19.59■□□□□ 0.73
VCP-202ENST00000417448 ZHX3Q9H4I2 956 aa19.59■□□□□ 0.73
VCP-202ENST00000417448 BACE2Q9Y5Z0 518 aa19.59■□□□□ 0.73
VCP-202ENST00000417448 KIF26AQ9ULI4 1882 aaPredicted RBP19.58■□□□□ 0.73
VCP-202ENST00000417448 NBEAQ8NFP9 2946 aa19.58■□□□□ 0.73
VCP-202ENST00000417448 I3L4J1 428 aa19.58■□□□□ 0.72
VCP-202ENST00000417448 SLC16A4O15374 487 aa19.58■□□□□ 0.72
VCP-202ENST00000417448 POLR2DO15514 142 aaKnown RBP19.58■□□□□ 0.72
VCP-202ENST00000417448 MOSPD3O75425 235 aa19.58■□□□□ 0.72
VCP-202ENST00000417448 KCNK5O95279 499 aa19.58■□□□□ 0.72
VCP-202ENST00000417448 LRG1P02750 347 aa19.58■□□□□ 0.72
VCP-202ENST00000417448 GUCY2CP25092 1073 aa19.58■□□□□ 0.72
VCP-202ENST00000417448 NPTX2P47972 431 aa19.58■□□□□ 0.72
VCP-202ENST00000417448 E2F4Q16254 413 aa19.58■□□□□ 0.72
VCP-202ENST00000417448 UNQ6494/PRO21346Q6UXR6 183 aa19.58■□□□□ 0.72
VCP-202ENST00000417448 CCDC73Q6ZRK6 1079 aa19.58■□□□□ 0.72
VCP-202ENST00000417448 DEPTORQ8TB45 409 aa19.58■□□□□ 0.72
VCP-202ENST00000417448 SMARCD2Q92925 531 aa19.58■□□□□ 0.72
VCP-202ENST00000417448 DSPP15924 2871 aaKnown RBP19.58■□□□□ 0.72
VCP-202ENST00000417448 TMEM189-UBE2V1I3L0A0 370 aa19.57■□□□□ 0.72
VCP-202ENST00000417448 AXIN1O15169 862 aa19.57■□□□□ 0.72
VCP-202ENST00000417448 ZNF806P0C7X5 589 aa19.57■□□□□ 0.72
VCP-202ENST00000417448 CASP1P29466 404 aa19.57■□□□□ 0.72
VCP-202ENST00000417448 NAMPTP43490 491 aa19.57■□□□□ 0.72
VCP-202ENST00000417448 SOX9P48436 509 aa19.57■□□□□ 0.72
VCP-202ENST00000417448 STPG1Q5TH74 334 aa19.57■□□□□ 0.72
VCP-202ENST00000417448 CEP68Q76N32 757 aa19.57■□□□□ 0.72
VCP-202ENST00000417448 SV2BQ7L1I2 683 aa19.57■□□□□ 0.72
VCP-202ENST00000417448 GRAMD1CQ8IYS0 662 aa19.57■□□□□ 0.72
VCP-202ENST00000417448 C12orf50Q8NA57 414 aaPredicted RBP19.57■□□□□ 0.72
VCP-202ENST00000417448 C3orf58Q8NDZ4 430 aa19.57■□□□□ 0.72
VCP-202ENST00000417448 SCAND2PQ9GZW5 306 aaPredicted RBP19.57■□□□□ 0.72
VCP-202ENST00000417448 SMOC1Q9H4F8 434 aa19.57■□□□□ 0.72
VCP-202ENST00000417448 PDZD7Q9H5P4 517 aa19.57■□□□□ 0.72
VCP-202ENST00000417448 CHMP5Q9NZZ3 219 aa19.57■□□□□ 0.72
VCP-202ENST00000417448 STK17AQ9UEE5 414 aa19.57■□□□□ 0.72
VCP-202ENST00000417448 B3GAT3O94766 335 aa19.56■□□□□ 0.72
VCP-202ENST00000417448 MICAL2O94851 1124 aa19.56■□□□□ 0.72
VCP-202ENST00000417448 ABLIM3O94929 683 aa19.56■□□□□ 0.72
VCP-202ENST00000417448 SEC24AO95486 1093 aa19.56■□□□□ 0.72
VCP-202ENST00000417448 CLCNKBP51801 687 aa19.56■□□□□ 0.72
VCP-202ENST00000417448 CDCA2Q69YH5 1023 aaPredicted RBP19.56■□□□□ 0.72
VCP-202ENST00000417448 SLC8B1Q6J4K2 584 aa19.56■□□□□ 0.72
VCP-202ENST00000417448 TXNDC11Q6PKC3 985 aa19.56■□□□□ 0.72
VCP-202ENST00000417448 PPP4R3CPQ6ZMV5 832 aa19.56■□□□□ 0.72
VCP-202ENST00000417448 ZBTB8OSQ8IWT0 167 aa19.56■□□□□ 0.72
VCP-202ENST00000417448 HS6ST3Q8IZP7 471 aa19.56■□□□□ 0.72
VCP-202ENST00000417448 KCTD17Q8N5Z5 321 aa19.56■□□□□ 0.72
VCP-202ENST00000417448 MYCT1Q8N699 235 aa19.56■□□□□ 0.72
VCP-202ENST00000417448 ZNF461Q8TAF7 563 aa19.56■□□□□ 0.72
VCP-202ENST00000417448 RSPRY1Q96DX4 576 aa19.56■□□□□ 0.72
VCP-202ENST00000417448 DRC1Q96MC2 740 aa19.56■□□□□ 0.72
VCP-202ENST00000417448 LSM14BQ9BX40 385 aaKnown RBP19.56■□□□□ 0.72
VCP-202ENST00000417448 GOLPH3LQ9H4A5 285 aa19.56■□□□□ 0.72
VCP-202ENST00000417448 KMT5AQ9NQR1 393 aa19.56■□□□□ 0.72
VCP-202ENST00000417448 FAM13BQ9NYF5 915 aa19.56■□□□□ 0.72
VCP-202ENST00000417448 SERTAD1Q9UHV2 236 aa19.56■□□□□ 0.72
VCP-202ENST00000417448 CIZ1Q9ULV3 898 aaPredicted RBP19.56■□□□□ 0.72
VCP-202ENST00000417448 DMXL2Q8TDJ6 3036 aa19.56■□□□□ 0.72
VCP-202ENST00000417448 SLC38A8A6NNN8 435 aa19.55■□□□□ 0.72
VCP-202ENST00000417448 ZNF263O14978 683 aa19.55■□□□□ 0.72
VCP-202ENST00000417448 FAM13AO94988 1023 aa19.55■□□□□ 0.72
VCP-202ENST00000417448 PRKCBP05771 671 aa19.55■□□□□ 0.72
VCP-202ENST00000417448 PLS3P13797 630 aa19.55■□□□□ 0.72
VCP-202ENST00000417448 PFKFB1P16118 471 aa19.55■□□□□ 0.72
VCP-202ENST00000417448 GJA1P17302 382 aa19.55■□□□□ 0.72
VCP-202ENST00000417448 BRCC3P46736 316 aa19.55■□□□□ 0.72
VCP-202ENST00000417448 GLRA4Q5JXX5 417 aa19.55■□□□□ 0.72
VCP-202ENST00000417448 ADALQ6DHV7 355 aa19.55■□□□□ 0.72
VCP-202ENST00000417448 ANKS3Q6ZW76 656 aa19.55■□□□□ 0.72
VCP-202ENST00000417448 PDZD4Q76G19 769 aaPredicted RBP19.55■□□□□ 0.72
VCP-202ENST00000417448 TAS1R3Q7RTX0 852 aa19.55■□□□□ 0.72
VCP-202ENST00000417448 WDR5BQ86VZ2 330 aa19.55■□□□□ 0.72
VCP-202ENST00000417448 FSIP1Q8NA03 581 aa19.55■□□□□ 0.72
VCP-202ENST00000417448 DEPDC1BQ8WUY9 529 aa19.55■□□□□ 0.72
VCP-202ENST00000417448 DDX12PQ92771 950 aa19.55■□□□□ 0.72
VCP-202ENST00000417448 TMEM121BQ9BXQ6 578 aaPredicted RBP19.55■□□□□ 0.72
VCP-202ENST00000417448 CCDC113Q9H0I3 377 aa19.55■□□□□ 0.72
VCP-202ENST00000417448 GOLGA2P5Q9HBQ8 144 aa19.55■□□□□ 0.72
VCP-202ENST00000417448 TBC1D7Q9P0N9 293 aa19.55■□□□□ 0.72
VCP-202ENST00000417448 PRRG1O14668 218 aa19.54■□□□□ 0.72
VCP-202ENST00000417448 ZNF197O14709 1029 aa19.54■□□□□ 0.72
VCP-202ENST00000417448 EPN2O95208 641 aa19.54■□□□□ 0.72
VCP-202ENST00000417448 CMA1P23946 247 aa19.54■□□□□ 0.72
VCP-202ENST00000417448 NMT1P30419 496 aaKnown RBP19.54■□□□□ 0.72
VCP-202ENST00000417448 AFMP43652 599 aa19.54■□□□□ 0.72
VCP-202ENST00000417448 RAP1GAPP47736 663 aa19.54■□□□□ 0.72
VCP-202ENST00000417448 MLLT6P55198 1093 aaPredicted RBP19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms