RNA–Protein interactions for RNA: ENST00000416717.6

SMPD4P1-201, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

BASIC

Gene SMPD4P1, Length 2,263 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-201ENST00000416717 UBXN11Q5T124 520 aa11.37□□□□□ -0.59
SMPD4P1-201ENST00000416717 TAF2Q6P1X5 1199 aa11.37□□□□□ -0.59
SMPD4P1-201ENST00000416717 ADAT2Q7Z6V5 191 aaKnown RBP11.37□□□□□ -0.59
SMPD4P1-201ENST00000416717 NME8Q8N427 588 aa11.37□□□□□ -0.59
SMPD4P1-201ENST00000416717 C1orf131Q8NDD1 294 aaKnown RBP11.37□□□□□ -0.59
SMPD4P1-201ENST00000416717 ZBTB9Q96C00 473 aa11.37□□□□□ -0.59
SMPD4P1-201ENST00000416717 HES6Q96HZ4 224 aa11.37□□□□□ -0.59
SMPD4P1-201ENST00000416717 RPGRIP1Q96KN7 1286 aa11.37□□□□□ -0.59
SMPD4P1-201ENST00000416717 LRRC1Q9BTT6 524 aa11.37□□□□□ -0.59
SMPD4P1-201ENST00000416717 AP1M1Q9BXS5 423 aa11.37□□□□□ -0.59
SMPD4P1-201ENST00000416717 OSBPL7Q9BZF2 842 aa11.37□□□□□ -0.59
SMPD4P1-201ENST00000416717 ADAM22Q9P0K1 906 aa11.37□□□□□ -0.59
SMPD4P1-201ENST00000416717 ANAPC7Q9UJX3 599 aa11.37□□□□□ -0.59
SMPD4P1-201ENST00000416717 C2CD2Q9Y426 696 aa11.37□□□□□ -0.59
SMPD4P1-201ENST00000416717 GRIN2DO15399 1336 aa11.37□□□□□ -0.59
SMPD4P1-201ENST00000416717 DDX3YO15523 660 aaKnown RBP11.37□□□□□ -0.59
SMPD4P1-201ENST00000416717 VSNL1P62760 191 aa11.37□□□□□ -0.59
SMPD4P1-201ENST00000416717 TNNC1P63316 161 aa11.37□□□□□ -0.59
SMPD4P1-201ENST00000416717 CENPCQ03188 943 aa11.37□□□□□ -0.59
SMPD4P1-201ENST00000416717 DAB2IPQ5VWQ8 1189 aa11.37□□□□□ -0.59
SMPD4P1-201ENST00000416717 AADACL2Q6P093 401 aa11.37□□□□□ -0.59
SMPD4P1-201ENST00000416717 HDAC7Q8WUI4 952 aa11.37□□□□□ -0.59
SMPD4P1-201ENST00000416717 KRT35Q92764 455 aa11.37□□□□□ -0.59
SMPD4P1-201ENST00000416717 BCO2Q9BYV7 579 aa11.37□□□□□ -0.59
SMPD4P1-201ENST00000416717 GOLGA2P5Q9HBQ8 144 aa11.37□□□□□ -0.59
SMPD4P1-201ENST00000416717 ZNF446Q9NWS9 450 aa11.37□□□□□ -0.59
SMPD4P1-201ENST00000416717 ITGA11Q9UKX5 1188 aa11.37□□□□□ -0.59
SMPD4P1-201ENST00000416717 SPOPO43791 374 aa11.36□□□□□ -0.59
SMPD4P1-201ENST00000416717 RPS6KA5O75582 802 aa11.36□□□□□ -0.59
SMPD4P1-201ENST00000416717 CHRNA1P02708 482 aa11.36□□□□□ -0.59
SMPD4P1-201ENST00000416717 HMGCRP04035 888 aa11.36□□□□□ -0.59
SMPD4P1-201ENST00000416717 AXLP30530 894 aa11.36□□□□□ -0.59
SMPD4P1-201ENST00000416717 THPOP40225 353 aa11.36□□□□□ -0.59
SMPD4P1-201ENST00000416717 RAD23BP54727 409 aa11.36□□□□□ -0.59
SMPD4P1-201ENST00000416717 PTGISQ16647 500 aa11.36□□□□□ -0.59
SMPD4P1-201ENST00000416717 DCAF12L1Q5VU92 463 aa11.36□□□□□ -0.59
SMPD4P1-201ENST00000416717 MON1BQ7L1V2 547 aa11.36□□□□□ -0.59
SMPD4P1-201ENST00000416717 ARRDC4Q8NCT1 418 aa11.36□□□□□ -0.59
SMPD4P1-201ENST00000416717 MSANTD4Q8NCY6 345 aa11.36□□□□□ -0.59
SMPD4P1-201ENST00000416717 ALG3Q92685 438 aa11.36□□□□□ -0.59
SMPD4P1-201ENST00000416717 PBKQ96KB5 322 aa11.36□□□□□ -0.59
SMPD4P1-201ENST00000416717 SELENOOQ9BVL4 669 aa11.36□□□□□ -0.59
SMPD4P1-201ENST00000416717 IPPQ9Y573 584 aa11.36□□□□□ -0.59
SMPD4P1-201ENST00000416717 TRPV2Q9Y5S1 764 aa11.36□□□□□ -0.59
SMPD4P1-201ENST00000416717 THSD7BQ9C0I4 1608 aa11.36□□□□□ -0.59
SMPD4P1-201ENST00000416717 MEIS3P2A8K0S8 358 aa11.35□□□□□ -0.59
SMPD4P1-201ENST00000416717 MYCP01106 439 aaPredicted RBP11.35□□□□□ -0.59
SMPD4P1-201ENST00000416717 HOXD10P28358 340 aa11.35□□□□□ -0.59
SMPD4P1-201ENST00000416717 ATICP31939 592 aa11.35□□□□□ -0.59
SMPD4P1-201ENST00000416717 HADHBP55084 474 aaKnown RBP11.35□□□□□ -0.59
SMPD4P1-201ENST00000416717 YWHAEP62258 255 aaKnown RBP11.35□□□□□ -0.59
SMPD4P1-201ENST00000416717 LLGL1Q15334 1064 aa11.35□□□□□ -0.59
SMPD4P1-201ENST00000416717 DENND1BQ6P3S1 775 aa11.35□□□□□ -0.59
SMPD4P1-201ENST00000416717 TMCO3Q6UWJ1 677 aa11.35□□□□□ -0.59
SMPD4P1-201ENST00000416717 TRIM72Q6ZMU5 477 aa11.35□□□□□ -0.59
SMPD4P1-201ENST00000416717 RSPH3Q86UC2 560 aa11.35□□□□□ -0.59
SMPD4P1-201ENST00000416717 CD302Q8IX05 232 aa11.35□□□□□ -0.59
SMPD4P1-201ENST00000416717 KLHL7Q8IXQ5 586 aa11.35□□□□□ -0.59
SMPD4P1-201ENST00000416717 USP38Q8NB14 1042 aa11.35□□□□□ -0.59
SMPD4P1-201ENST00000416717 SMG8Q8ND04 991 aaKnown RBP11.35□□□□□ -0.59
SMPD4P1-201ENST00000416717 KLHDC9Q8NEP7 349 aa11.35□□□□□ -0.59
SMPD4P1-201ENST00000416717 WHAMMQ8TF30 809 aa11.35□□□□□ -0.59
SMPD4P1-201ENST00000416717 KRT12Q99456 494 aa11.35□□□□□ -0.59
SMPD4P1-201ENST00000416717 ELOVL4Q9GZR5 314 aa11.35□□□□□ -0.59
SMPD4P1-201ENST00000416717 PLEKHA5Q9HAU0 1116 aa11.35□□□□□ -0.59
SMPD4P1-201ENST00000416717 TRMT13Q9NUP7 481 aaKnown RBP11.35□□□□□ -0.59
SMPD4P1-201ENST00000416717 UVRAGQ9P2Y5 699 aa11.35□□□□□ -0.59
SMPD4P1-201ENST00000416717 ST3GAL5Q9UNP4 418 aa11.35□□□□□ -0.59
SMPD4P1-201ENST00000416717 SNX9Q9Y5X1 595 aa11.35□□□□□ -0.59
SMPD4P1-201ENST00000416717 SMIM28A0A1B0GU29 152 aa11.35□□□□□ -0.59
SMPD4P1-201ENST00000416717 TLR3O15455 904 aaKnown RBP11.35□□□□□ -0.59
SMPD4P1-201ENST00000416717 P4HA1P13674 534 aa11.35□□□□□ -0.59
SMPD4P1-201ENST00000416717 POU5F1Q01860 360 aaKnown RBP11.35□□□□□ -0.59
SMPD4P1-201ENST00000416717 PCBP1Q15365 356 aaKnown RBP eCLIP11.35□□□□□ -0.59
SMPD4P1-201ENST00000416717 CYP4A22Q5TCH4 519 aa11.35□□□□□ -0.59
SMPD4P1-201ENST00000416717 LIN9Q5TKA1 542 aa11.35□□□□□ -0.59
SMPD4P1-201ENST00000416717 C11orf63Q6NUN7 778 aa11.35□□□□□ -0.59
SMPD4P1-201ENST00000416717 ALKAL1Q6UXT8 129 aa11.35□□□□□ -0.59
SMPD4P1-201ENST00000416717 ZNF572Q7Z3I7 529 aaPredicted RBP11.35□□□□□ -0.59
SMPD4P1-201ENST00000416717 SERINC5Q86VE9 423 aa11.35□□□□□ -0.59
SMPD4P1-201ENST00000416717 SLC4A11Q8NBS3 891 aa11.35□□□□□ -0.59
SMPD4P1-201ENST00000416717 BEST2Q8NFU1 509 aa11.35□□□□□ -0.59
SMPD4P1-201ENST00000416717 HEXIM2Q96MH2 286 aaKnown RBP11.35□□□□□ -0.59
SMPD4P1-201ENST00000416717 ZFP42Q96MM3 310 aa11.35□□□□□ -0.59
SMPD4P1-201ENST00000416717 CACNG4Q9UBN1 327 aa11.35□□□□□ -0.59
SMPD4P1-201ENST00000416717 DDX20Q9UHI6 824 aaKnown RBP11.35□□□□□ -0.59
SMPD4P1-201ENST00000416717 NOD1Q9Y239 953 aa11.35□□□□□ -0.59
SMPD4P1-201ENST00000416717 SPDYE4A6NLX3 237 aa11.34□□□□□ -0.59
SMPD4P1-201ENST00000416717 PGRMC1O00264 195 aaKnown RBP11.34□□□□□ -0.59
SMPD4P1-201ENST00000416717 CILPO75339 1184 aa11.34□□□□□ -0.59
SMPD4P1-201ENST00000416717 MTA2O94776 668 aa11.34□□□□□ -0.59
SMPD4P1-201ENST00000416717 FGGP02679 453 aa11.34□□□□□ -0.59
SMPD4P1-201ENST00000416717 CDR1P51861 262 aa11.34□□□□□ -0.59
SMPD4P1-201ENST00000416717 NDST1P52848 882 aa11.34□□□□□ -0.59
SMPD4P1-201ENST00000416717 TUBB4BP68371 445 aa11.34□□□□□ -0.59
SMPD4P1-201ENST00000416717 MYO1EQ12965 1108 aa11.34□□□□□ -0.59
SMPD4P1-201ENST00000416717 CCSAPQ6IQ19 270 aaPredicted RBP11.34□□□□□ -0.59
SMPD4P1-201ENST00000416717 C8orf74Q6P047 294 aa11.34□□□□□ -0.59
SMPD4P1-201ENST00000416717 CC2D1AQ6P1N0 951 aaPredicted RBP11.34□□□□□ -0.59
SMPD4P1-201ENST00000416717 NT5DC4Q86YG4 428 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms