RNA–Protein interactions for RNA: ENST00000415409.5

HDAC8-211, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 913 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-211ENST00000415409 MYADML2A6NDP7 307 aa7.1□□□□□ -1.27
HDAC8-211ENST00000415409 TMCO5BA8MYB1 307 aa7.1□□□□□ -1.27
HDAC8-211ENST00000415409 SPTLC1O15269 473 aa7.1□□□□□ -1.27
HDAC8-211ENST00000415409 CTIFO43310 598 aaKnown RBP7.1□□□□□ -1.27
HDAC8-211ENST00000415409 BUB1O43683 1085 aa7.1□□□□□ -1.27
HDAC8-211ENST00000415409 ADAMTS4O75173 837 aa7.1□□□□□ -1.27
HDAC8-211ENST00000415409 ASS1P00966 412 aaKnown RBP7.1□□□□□ -1.27
HDAC8-211ENST00000415409 KRT19P08727 400 aa7.1□□□□□ -1.27
HDAC8-211ENST00000415409 GZMAP12544 262 aa7.1□□□□□ -1.27
HDAC8-211ENST00000415409 P4HA1P13674 534 aa7.1□□□□□ -1.27
HDAC8-211ENST00000415409 CYP11B1P15538 503 aa7.1□□□□□ -1.27
HDAC8-211ENST00000415409 FGFR4P22455 802 aa7.1□□□□□ -1.27
HDAC8-211ENST00000415409 CST5P28325 142 aaPredicted RBP7.1□□□□□ -1.27
HDAC8-211ENST00000415409 CCND3P30281 292 aaPredicted RBP7.1□□□□□ -1.27
HDAC8-211ENST00000415409 HOXA11P31270 313 aaPredicted RBP7.1□□□□□ -1.27
HDAC8-211ENST00000415409 ATICP31939 592 aa7.1□□□□□ -1.27
HDAC8-211ENST00000415409 NOP2P46087 812 aaKnown RBP7.1□□□□□ -1.27
HDAC8-211ENST00000415409 GALCP54803 685 aa7.1□□□□□ -1.27
HDAC8-211ENST00000415409 MYL6P60660 151 aa7.1□□□□□ -1.27
HDAC8-211ENST00000415409 TUBB4BP68371 445 aa7.1□□□□□ -1.27
HDAC8-211ENST00000415409 MRPS6P82932 125 aaKnown RBP7.1□□□□□ -1.27
HDAC8-211ENST00000415409 RBP5P82980 135 aa7.1□□□□□ -1.27
HDAC8-211ENST00000415409 ZNF200P98182 395 aaPredicted RBP7.1□□□□□ -1.27
HDAC8-211ENST00000415409 TMEM132DQ14C87 1099 aa7.1□□□□□ -1.27
HDAC8-211ENST00000415409 SNX17Q15036 470 aa7.1□□□□□ -1.27
HDAC8-211ENST00000415409 KCNA10Q16322 511 aa7.1□□□□□ -1.27
HDAC8-211ENST00000415409 ZNF699Q32M78 642 aa7.1□□□□□ -1.27
HDAC8-211ENST00000415409 SLC10A6Q3KNW5 377 aa7.1□□□□□ -1.27
HDAC8-211ENST00000415409 FAM47CQ5HY64 1035 aa7.1□□□□□ -1.27
HDAC8-211ENST00000415409 TAF3Q5VWG9 929 aa7.1□□□□□ -1.27
HDAC8-211ENST00000415409 SPOPLQ6IQ16 392 aa7.1□□□□□ -1.27
HDAC8-211ENST00000415409 PPP1R2P3Q6NXS1 205 aa7.1□□□□□ -1.27
HDAC8-211ENST00000415409 SESTD1Q86VW0 696 aa7.1□□□□□ -1.27
HDAC8-211ENST00000415409 CEP120Q8N960 986 aa7.1□□□□□ -1.27
HDAC8-211ENST00000415409 LNX1Q8TBB1 728 aaPredicted RBP7.1□□□□□ -1.27
HDAC8-211ENST00000415409 EPS8L1Q8TE68 723 aa7.1□□□□□ -1.27
HDAC8-211ENST00000415409 PPP1R13LQ8WUF5 828 aa7.1□□□□□ -1.27
HDAC8-211ENST00000415409 FAXDC2Q96IV6 333 aa7.1□□□□□ -1.27
HDAC8-211ENST00000415409 TSPAN18Q96SJ8 248 aa7.1□□□□□ -1.27
HDAC8-211ENST00000415409 CARD6Q9BX69 1037 aa7.1□□□□□ -1.27
HDAC8-211ENST00000415409 PACSIN1Q9BY11 444 aa7.1□□□□□ -1.27
HDAC8-211ENST00000415409 CELF4Q9BZC1 486 aaKnown RBP7.1□□□□□ -1.27
HDAC8-211ENST00000415409 NIF3L1Q9GZT8 377 aa7.1□□□□□ -1.27
HDAC8-211ENST00000415409 APOBEC3GQ9HC16 384 aaKnown RBP7.1□□□□□ -1.27
HDAC8-211ENST00000415409 DDX20Q9UHI6 824 aaKnown RBP7.1□□□□□ -1.27
HDAC8-211ENST00000415409 NOCTQ9UK39 431 aaKnown RBP7.1□□□□□ -1.27
HDAC8-211ENST00000415409 PIN4Q9Y237 131 aaKnown RBP7.1□□□□□ -1.27
HDAC8-211ENST00000415409 C2CD2Q9Y426 696 aa7.1□□□□□ -1.27
HDAC8-211ENST00000415409 TRPV2Q9Y5S1 764 aa7.1□□□□□ -1.27
HDAC8-211ENST00000415409 MRFAP1Q9Y605 127 aa7.1□□□□□ -1.27
HDAC8-211ENST00000415409 SAR1BQ9Y6B6 198 aa7.1□□□□□ -1.27
HDAC8-211ENST00000415409 LOXHD1Q8IVV2 1947 aa7.09□□□□□ -1.27
HDAC8-211ENST00000415409 ANKRD62A6NC57 917 aa7.09□□□□□ -1.27
HDAC8-211ENST00000415409 TRIM66O15016 1216 aa7.09□□□□□ -1.27
HDAC8-211ENST00000415409 FANCGO15287 622 aa7.09□□□□□ -1.27
HDAC8-211ENST00000415409 RTN2O75298 545 aa7.09□□□□□ -1.27
HDAC8-211ENST00000415409 PALMO75781 387 aa7.09□□□□□ -1.27
HDAC8-211ENST00000415409 CST3P01034 146 aaPredicted RBP7.09□□□□□ -1.27
HDAC8-211ENST00000415409 FTLP02792 175 aaPredicted RBP7.09□□□□□ -1.27
HDAC8-211ENST00000415409 ATP1A1P05023 1023 aaKnown RBP7.09□□□□□ -1.27
HDAC8-211ENST00000415409 ASGR1P07306 291 aa7.09□□□□□ -1.27
HDAC8-211ENST00000415409 NFICP08651 508 aa7.09□□□□□ -1.27
HDAC8-211ENST00000415409 PRLRP16471 622 aa7.09□□□□□ -1.27
HDAC8-211ENST00000415409 CHRNB2P17787 502 aa7.09□□□□□ -1.27
HDAC8-211ENST00000415409 TCP1P17987 556 aaKnown RBP7.09□□□□□ -1.27
HDAC8-211ENST00000415409 ACO1P21399 889 aaKnown RBP7.09□□□□□ -1.27
HDAC8-211ENST00000415409 GMPRP36959 345 aa7.09□□□□□ -1.27
HDAC8-211ENST00000415409 GPC5P78333 572 aa7.09□□□□□ -1.27
HDAC8-211ENST00000415409 MLLT1Q03111 559 aaPredicted RBP7.09□□□□□ -1.27
HDAC8-211ENST00000415409 PTPN11Q06124 597 aaPredicted RBP7.09□□□□□ -1.27
HDAC8-211ENST00000415409 CKAP4Q07065 602 aaKnown RBP7.09□□□□□ -1.27
HDAC8-211ENST00000415409 ZNF667Q5HYK9 610 aa7.09□□□□□ -1.27
HDAC8-211ENST00000415409 MAP3K21Q5TCX8 1036 aa7.09□□□□□ -1.27
HDAC8-211ENST00000415409 PAPD7Q5XG87 772 aaKnown RBP7.09□□□□□ -1.27
HDAC8-211ENST00000415409 JADE1Q6IE81 842 aa7.09□□□□□ -1.27
HDAC8-211ENST00000415409 ACAD10Q6JQN1 1059 aa7.09□□□□□ -1.27
HDAC8-211ENST00000415409 TMEM270Q6UE05 265 aa7.09□□□□□ -1.27
HDAC8-211ENST00000415409 TRIM72Q6ZMU5 477 aa7.09□□□□□ -1.27
HDAC8-211ENST00000415409 NOP9Q86U38 636 aaKnown RBP7.09□□□□□ -1.27
HDAC8-211ENST00000415409 RPAINQ86UA6 219 aa7.09□□□□□ -1.27
HDAC8-211ENST00000415409 SLC47A2Q86VL8 602 aa7.09□□□□□ -1.27
HDAC8-211ENST00000415409 NPAS3Q8IXF0 933 aa7.09□□□□□ -1.27
HDAC8-211ENST00000415409 RHOT2Q8IXI1 618 aa7.09□□□□□ -1.27
HDAC8-211ENST00000415409 EFCAB13Q8IY85 973 aa7.09□□□□□ -1.27
HDAC8-211ENST00000415409 TMEM192Q8IY95 271 aa7.09□□□□□ -1.27
HDAC8-211ENST00000415409 HACE1Q8IYU2 909 aa7.09□□□□□ -1.27
HDAC8-211ENST00000415409 SYCE1Q8N0S2 351 aa7.09□□□□□ -1.27
HDAC8-211ENST00000415409 TTC39CQ8N584 583 aa7.09□□□□□ -1.27
HDAC8-211ENST00000415409 RBBP8NLQ8NC74 664 aaPredicted RBP7.09□□□□□ -1.27
HDAC8-211ENST00000415409 KLHDC9Q8NEP7 349 aa7.09□□□□□ -1.27
HDAC8-211ENST00000415409 BEST2Q8NFU1 509 aa7.09□□□□□ -1.27
HDAC8-211ENST00000415409 SLC20A1Q8WUM9 679 aa7.09□□□□□ -1.27
HDAC8-211ENST00000415409 RFFLQ8WZ73 363 aa7.09□□□□□ -1.27
HDAC8-211ENST00000415409 FOXJ1Q92949 421 aa7.09□□□□□ -1.27
HDAC8-211ENST00000415409 TRIM11Q96F44 468 aa7.09□□□□□ -1.27
HDAC8-211ENST00000415409 FAM84AQ96KN4 292 aa7.09□□□□□ -1.27
HDAC8-211ENST00000415409 ISCUQ9H1K1 167 aa7.09□□□□□ -1.27
HDAC8-211ENST00000415409 DPP3Q9NY33 737 aa7.09□□□□□ -1.27
HDAC8-211ENST00000415409 SNTG2Q9NY99 539 aa7.09□□□□□ -1.27
HDAC8-211ENST00000415409 ITGA11Q9UKX5 1188 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms