RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 RSPH3Q86UC2 560 aa12.35□□□□□ -0.43
RFFL-205ENST00000415395 NT5DC4Q86YG4 428 aa12.35□□□□□ -0.43
RFFL-205ENST00000415395 KLHL7Q8IXQ5 586 aa12.35□□□□□ -0.43
RFFL-205ENST00000415395 THNSL1Q8IYQ7 743 aa12.35□□□□□ -0.43
RFFL-205ENST00000415395 PPM1KQ8N3J5 372 aa12.35□□□□□ -0.43
RFFL-205ENST00000415395 DHX38Q92620 1227 aaKnown RBP12.35□□□□□ -0.43
RFFL-205ENST00000415395 FAXDC2Q96IV6 333 aa12.35□□□□□ -0.43
RFFL-205ENST00000415395 IMPG2Q9BZV3 1241 aa12.35□□□□□ -0.43
RFFL-205ENST00000415395 RAB17Q9H0T7 212 aa12.35□□□□□ -0.43
RFFL-205ENST00000415395 ACTR5Q9H9F9 607 aaPredicted RBP12.35□□□□□ -0.43
RFFL-205ENST00000415395 PTPRJQ12913 1337 aa12.35□□□□□ -0.43
RFFL-205ENST00000415395 GOLGA6L10A0A0M3HER8 536 aa12.34□□□□□ -0.43
RFFL-205ENST00000415395 GOLGA6L7A0A1B0GV03 622 aa12.34□□□□□ -0.43
RFFL-205ENST00000415395 TMCO5BA8MYB1 307 aa12.34□□□□□ -0.43
RFFL-205ENST00000415395 KRT14P02533 472 aa12.34□□□□□ -0.43
RFFL-205ENST00000415395 TBXAS1P24557 533 aaPredicted RBP12.34□□□□□ -0.43
RFFL-205ENST00000415395 GBP1P32455 592 aa12.34□□□□□ -0.43
RFFL-205ENST00000415395 GRM5P41594 1212 aa12.34□□□□□ -0.43
RFFL-205ENST00000415395 ATP1A2P50993 1020 aa12.34□□□□□ -0.43
RFFL-205ENST00000415395 PTPN11Q06124 597 aaPredicted RBP12.34□□□□□ -0.43
RFFL-205ENST00000415395 SNX17Q15036 470 aa12.34□□□□□ -0.43
RFFL-205ENST00000415395 ARHGAP44Q17R89 818 aa12.34□□□□□ -0.43
RFFL-205ENST00000415395 SKIDA1Q1XH10 827 aa12.34□□□□□ -0.43
RFFL-205ENST00000415395 SLC27A1Q6PCB7 646 aa12.34□□□□□ -0.43
RFFL-205ENST00000415395 CXCL17Q6UXB2 119 aa12.34□□□□□ -0.43
RFFL-205ENST00000415395 CATSPER4Q7RTX7 472 aa12.34□□□□□ -0.43
RFFL-205ENST00000415395 ZNF571Q7Z3V5 609 aaPredicted RBP12.34□□□□□ -0.43
RFFL-205ENST00000415395 FAM71AQ8IYT1 594 aa12.34□□□□□ -0.43
RFFL-205ENST00000415395 CNPY4Q8N129 248 aa12.34□□□□□ -0.43
RFFL-205ENST00000415395 P3H4Q92791 437 aa12.34□□□□□ -0.43
RFFL-205ENST00000415395 ANKRD36BP1Q96IX9 119 aa12.34□□□□□ -0.43
RFFL-205ENST00000415395 RNPC3Q96LT9 517 aaKnown RBP12.34□□□□□ -0.43
RFFL-205ENST00000415395 PPP1R16BQ96T49 567 aa12.34□□□□□ -0.43
RFFL-205ENST00000415395 OSMRQ99650 979 aa12.34□□□□□ -0.43
RFFL-205ENST00000415395 TSEN34Q9BSV6 310 aaKnown RBP12.34□□□□□ -0.43
RFFL-205ENST00000415395 NAGPAQ9UK23 515 aa12.34□□□□□ -0.43
RFFL-205ENST00000415395 UTP11Q9Y3A2 253 aaKnown RBP12.34□□□□□ -0.43
RFFL-205ENST00000415395 MOXD2PA6NHM9 499 aa12.34□□□□□ -0.43
RFFL-205ENST00000415395 M0QZ92 97 aa12.34□□□□□ -0.43
RFFL-205ENST00000415395 FOXN3O00409 490 aaPredicted RBP12.34□□□□□ -0.43
RFFL-205ENST00000415395 KRIT1O00522 736 aa12.34□□□□□ -0.43
RFFL-205ENST00000415395 VNN1O95497 513 aa12.34□□□□□ -0.43
RFFL-205ENST00000415395 TNNC2P02585 160 aa12.34□□□□□ -0.43
RFFL-205ENST00000415395 ASGR1P07306 291 aa12.34□□□□□ -0.43
RFFL-205ENST00000415395 FAM153BP0C7A2 387 aa12.34□□□□□ -0.43
RFFL-205ENST00000415395 TMEM191BP0C7N4 346 aa12.34□□□□□ -0.43
RFFL-205ENST00000415395 STAG3L1P0CL83 205 aa12.34□□□□□ -0.43
RFFL-205ENST00000415395 CTNNA1P35221 906 aaKnown RBP12.34□□□□□ -0.43
RFFL-205ENST00000415395 DNA2P51530 1060 aa12.34□□□□□ -0.43
RFFL-205ENST00000415395 NCOA4Q13772 614 aa12.34□□□□□ -0.43
RFFL-205ENST00000415395 KCNA10Q16322 511 aa12.34□□□□□ -0.43
RFFL-205ENST00000415395 FAM153CQ494X1 144 aa12.34□□□□□ -0.43
RFFL-205ENST00000415395 SEZ6Q53EL9 994 aa12.34□□□□□ -0.43
RFFL-205ENST00000415395 SWT1Q5T5J6 900 aaKnown RBP12.34□□□□□ -0.43
RFFL-205ENST00000415395 NAA35Q5VZE5 725 aa12.34□□□□□ -0.43
RFFL-205ENST00000415395 KCTD16Q68DU8 428 aa12.34□□□□□ -0.43
RFFL-205ENST00000415395 NLRP14Q86W24 1093 aa12.34□□□□□ -0.43
RFFL-205ENST00000415395 RASGEF1CQ8N431 466 aa12.34□□□□□ -0.43
RFFL-205ENST00000415395 OR5B17Q8NGF7 314 aa12.34□□□□□ -0.43
RFFL-205ENST00000415395 ZNF473Q8WTR7 871 aaKnown RBP12.34□□□□□ -0.43
RFFL-205ENST00000415395 ZNF296Q8WUU4 475 aaPredicted RBP12.34□□□□□ -0.43
RFFL-205ENST00000415395 CPB2Q96IY4 423 aa12.34□□□□□ -0.43
RFFL-205ENST00000415395 KREMEN1Q96MU8 473 aa12.34□□□□□ -0.43
RFFL-205ENST00000415395 SYT11Q9BT88 431 aa12.34□□□□□ -0.43
RFFL-205ENST00000415395 CNOT10Q9H9A5 744 aaKnown RBP12.34□□□□□ -0.43
RFFL-205ENST00000415395 PLEKHA5Q9HAU0 1116 aa12.34□□□□□ -0.43
RFFL-205ENST00000415395 FAM153AQ9UHL3 310 aa12.34□□□□□ -0.43
RFFL-205ENST00000415395 AMFRQ9UKV5 643 aa12.34□□□□□ -0.43
RFFL-205ENST00000415395 NENFQ9UMX5 172 aa12.34□□□□□ -0.43
RFFL-205ENST00000415395 PDCD11Q14690 1871 aaKnown RBP12.33□□□□□ -0.43
RFFL-205ENST00000415395 MROH7Q68CQ1 1323 aa12.33□□□□□ -0.44
RFFL-205ENST00000415395 ESYT3A0FGR9 886 aa12.33□□□□□ -0.44
RFFL-205ENST00000415395 CSDE1O75534 798 aaKnown RBP12.33□□□□□ -0.44
RFFL-205ENST00000415395 CXCL8P10145 99 aa12.33□□□□□ -0.44
RFFL-205ENST00000415395 HOXA11P31270 313 aaPredicted RBP12.33□□□□□ -0.44
RFFL-205ENST00000415395 MRPS25P82663 173 aaKnown RBP12.33□□□□□ -0.44
RFFL-205ENST00000415395 ZNF200P98182 395 aaPredicted RBP12.33□□□□□ -0.44
RFFL-205ENST00000415395 LMBRD2Q68DH5 695 aaPredicted RBP12.33□□□□□ -0.44
RFFL-205ENST00000415395 CCDC91Q7Z6B0 441 aa12.33□□□□□ -0.44
RFFL-205ENST00000415395 SERINC5Q86VE9 423 aa12.33□□□□□ -0.44
RFFL-205ENST00000415395 TAX1BP1Q86VP1 789 aa12.33□□□□□ -0.44
RFFL-205ENST00000415395 HOOK3Q86VS8 718 aa12.33□□□□□ -0.44
RFFL-205ENST00000415395 CEP120Q8N960 986 aa12.33□□□□□ -0.44
RFFL-205ENST00000415395 LRRC57Q8N9N7 239 aa12.33□□□□□ -0.44
RFFL-205ENST00000415395 TPCN2Q8NHX9 752 aa12.33□□□□□ -0.44
RFFL-205ENST00000415395 PIK3R5Q8WYR1 880 aa12.33□□□□□ -0.44
RFFL-205ENST00000415395 CABS1Q96KC9 395 aa12.33□□□□□ -0.44
RFFL-205ENST00000415395 ACAP3Q96P50 834 aa12.33□□□□□ -0.44
RFFL-205ENST00000415395 TSPAN18Q96SJ8 248 aa12.33□□□□□ -0.44
RFFL-205ENST00000415395 HINFPQ9BQA5 517 aa12.33□□□□□ -0.44
RFFL-205ENST00000415395 CELF4Q9BZC1 486 aaKnown RBP12.33□□□□□ -0.44
RFFL-205ENST00000415395 HMX1Q9NP08 348 aaPredicted RBP12.33□□□□□ -0.44
RFFL-205ENST00000415395 RASAL2Q9UJF2 1139 aa12.33□□□□□ -0.44
RFFL-205ENST00000415395 TTC7AQ9ULT0 858 aaPredicted RBP12.33□□□□□ -0.44
RFFL-205ENST00000415395 DERAQ9Y315 318 aa12.33□□□□□ -0.44
RFFL-205ENST00000415395 NOC2LQ9Y3T9 749 aaKnown RBP12.33□□□□□ -0.44
RFFL-205ENST00000415395 C2CD2Q9Y426 696 aa12.33□□□□□ -0.44
RFFL-205ENST00000415395 LRRN2O75325 713 aa12.32□□□□□ -0.44
RFFL-205ENST00000415395 ASS1P00966 412 aaKnown RBP12.32□□□□□ -0.44
RFFL-205ENST00000415395 INHAP05111 366 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms