RNA–Protein interactions for RNA: ENST00000414963.2

SF3B1-204, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 651 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-204ENST00000414963 RGS19P49795 217 aa15.25■□□□□ 0.03
SF3B1-204ENST00000414963 ZNF132P52740 706 aa15.25■□□□□ 0.03
SF3B1-204ENST00000414963 HS1BP3Q53T59 392 aa15.25■□□□□ 0.03
SF3B1-204ENST00000414963 E4F1Q66K89 784 aaPredicted RBP15.25■□□□□ 0.03
SF3B1-204ENST00000414963 HERC6Q8IVU3 1022 aa15.25■□□□□ 0.03
SF3B1-204ENST00000414963 CCDC112Q8NEF3 446 aa15.25■□□□□ 0.03
SF3B1-204ENST00000414963 SUSD3Q96L08 255 aa15.25■□□□□ 0.03
SF3B1-204ENST00000414963 SENP8Q96LD8 212 aa15.25■□□□□ 0.03
SF3B1-204ENST00000414963 MMS19Q96T76 1030 aa15.25■□□□□ 0.03
SF3B1-204ENST00000414963 COLEC11Q9BWP8 271 aa15.25■□□□□ 0.03
SF3B1-204ENST00000414963 SMYD3Q9H7B4 428 aa15.25■□□□□ 0.03
SF3B1-204ENST00000414963 ARHGEF37A1IGU5 675 aa15.24■□□□□ 0.03
SF3B1-204ENST00000414963 CYB561D2O14569 222 aa15.24■□□□□ 0.03
SF3B1-204ENST00000414963 NRP1O14786 923 aa15.24■□□□□ 0.03
SF3B1-204ENST00000414963 HUS1O60921 280 aa15.24■□□□□ 0.03
SF3B1-204ENST00000414963 CILPO75339 1184 aa15.24■□□□□ 0.03
SF3B1-204ENST00000414963 KIF4AO95239 1232 aa15.24■□□□□ 0.03
SF3B1-204ENST00000414963 CYP11A1P05108 521 aa15.24■□□□□ 0.03
SF3B1-204ENST00000414963 SERPING1P05155 500 aa15.24■□□□□ 0.03
SF3B1-204ENST00000414963 ATP2A2P16615 1042 aaKnown RBP15.24■□□□□ 0.03
SF3B1-204ENST00000414963 OR1G1P47890 313 aa15.24■□□□□ 0.03
SF3B1-204ENST00000414963 SLC11A1P49279 550 aa15.24■□□□□ 0.03
SF3B1-204ENST00000414963 CDH8P55286 799 aa15.24■□□□□ 0.03
SF3B1-204ENST00000414963 BCAR1P56945 870 aa15.24■□□□□ 0.03
SF3B1-204ENST00000414963 BPIFB4P59827 614 aa15.24■□□□□ 0.03
SF3B1-204ENST00000414963 BTG3Q14201 252 aaPredicted RBP15.24■□□□□ 0.03
SF3B1-204ENST00000414963 ASIC2Q16515 512 aa15.24■□□□□ 0.03
SF3B1-204ENST00000414963 PAN2Q504Q3 1202 aaKnown RBP15.24■□□□□ 0.03
SF3B1-204ENST00000414963 TIGD5Q53EQ6 642 aa15.24■□□□□ 0.03
SF3B1-204ENST00000414963 HGSNATQ68CP4 663 aa15.24■□□□□ 0.03
SF3B1-204ENST00000414963 TMCO2Q7Z6W1 182 aaPredicted RBP15.24■□□□□ 0.03
SF3B1-204ENST00000414963 TMTC1Q8IUR5 882 aa15.24■□□□□ 0.03
SF3B1-204ENST00000414963 TMEM139Q8IV31 216 aa15.24■□□□□ 0.03
SF3B1-204ENST00000414963 TMEM86AQ8N2M4 240 aa15.24■□□□□ 0.03
SF3B1-204ENST00000414963 APPL2Q8NEU8 664 aa15.24■□□□□ 0.03
SF3B1-204ENST00000414963 SP7Q8TDD2 431 aaPredicted RBP15.24■□□□□ 0.03
SF3B1-204ENST00000414963 RABGGTAQ92696 567 aa15.24■□□□□ 0.03
SF3B1-204ENST00000414963 YME1L1Q96TA2 773 aa15.24■□□□□ 0.03
SF3B1-204ENST00000414963 RAD9AQ99638 391 aa15.24■□□□□ 0.03
SF3B1-204ENST00000414963 BAG1Q99933 345 aaPredicted RBP15.24■□□□□ 0.03
SF3B1-204ENST00000414963 BARX2Q9UMQ3 279 aaPredicted RBP15.24■□□□□ 0.03
SF3B1-204ENST00000414963 FAN1Q9Y2M0 1017 aa15.24■□□□□ 0.03
SF3B1-204ENST00000414963 INSL6Q9Y581 213 aa15.24■□□□□ 0.03
SF3B1-204ENST00000414963 SCN1AP35498 2009 aa15.23■□□□□ 0.03
SF3B1-204ENST00000414963 GABRDO14764 452 aa15.23■□□□□ 0.03
SF3B1-204ENST00000414963 TRAPPC3O43617 180 aa15.23■□□□□ 0.03
SF3B1-204ENST00000414963 GFPT2O94808 682 aa15.23■□□□□ 0.03
SF3B1-204ENST00000414963 CLSTN1O94985 981 aa15.23■□□□□ 0.03
SF3B1-204ENST00000414963 EFEMP2O95967 443 aa15.23■□□□□ 0.03
SF3B1-204ENST00000414963 PNMA6AP0CW24 399 aaPredicted RBP15.23■□□□□ 0.03
SF3B1-204ENST00000414963 WARSP23381 471 aaKnown RBP15.23■□□□□ 0.03
SF3B1-204ENST00000414963 ANXA13P27216 316 aa15.23■□□□□ 0.03
SF3B1-204ENST00000414963 CLCN1P35523 988 aa15.23■□□□□ 0.03
SF3B1-204ENST00000414963 ALDH7A1P49419 539 aaKnown RBP15.23■□□□□ 0.03
SF3B1-204ENST00000414963 FAM117BQ6P1L5 589 aa15.23■□□□□ 0.03
SF3B1-204ENST00000414963 CYP26C1Q6V0L0 522 aa15.23■□□□□ 0.03
SF3B1-204ENST00000414963 SCARA5Q6ZMJ2 495 aa15.23■□□□□ 0.03
SF3B1-204ENST00000414963 UNC93AQ86WB7 457 aa15.23■□□□□ 0.03
SF3B1-204ENST00000414963 PDCL2Q8N4E4 241 aa15.23■□□□□ 0.03
SF3B1-204ENST00000414963 WHAMMQ8TF30 809 aa15.23■□□□□ 0.03
SF3B1-204ENST00000414963 KBTBD7Q8WVZ9 684 aa15.23■□□□□ 0.03
SF3B1-204ENST00000414963 GDF15Q99988 308 aa15.23■□□□□ 0.03
SF3B1-204ENST00000414963 MRPL45Q9BRJ2 306 aaKnown RBP15.23■□□□□ 0.03
SF3B1-204ENST00000414963 SYT11Q9BT88 431 aa15.23■□□□□ 0.03
SF3B1-204ENST00000414963 MARCH5Q9NX47 278 aa15.23■□□□□ 0.03
SF3B1-204ENST00000414963 DSEQ9UL01 958 aa15.23■□□□□ 0.03
SF3B1-204ENST00000414963 L1RE1Q9UN81 338 aa15.23■□□□□ 0.03
SF3B1-204ENST00000414963 PCDHB4Q9Y5E5 795 aa15.23■□□□□ 0.03
SF3B1-204ENST00000414963 TDRD15B5MCY1 1934 aaKnown RBP15.23■□□□□ 0.03
SF3B1-204ENST00000414963 FNDC1Q4ZHG4 1894 aaPredicted RBP15.23■□□□□ 0.03
SF3B1-204ENST00000414963 SSU72P8A0A1W2PR75 194 aa15.22■□□□□ 0.03
SF3B1-204ENST00000414963 CYP26A1O43174 497 aa15.22■□□□□ 0.03
SF3B1-204ENST00000414963 TADA2AO75478 443 aa15.22■□□□□ 0.03
SF3B1-204ENST00000414963 ITGB1P05556 798 aa15.22■□□□□ 0.03
SF3B1-204ENST00000414963 PAEPP09466 180 aa15.22■□□□□ 0.03
SF3B1-204ENST00000414963 ODC1P11926 461 aa15.22■□□□□ 0.03
SF3B1-204ENST00000414963 KRT5P13647 590 aa15.22■□□□□ 0.03
SF3B1-204ENST00000414963 LAG3P18627 525 aa15.22■□□□□ 0.03
SF3B1-204ENST00000414963 TYMPP19971 482 aa15.22■□□□□ 0.03
SF3B1-204ENST00000414963 RAP1GAPP47736 663 aa15.22■□□□□ 0.03
SF3B1-204ENST00000414963 RAD23BP54727 409 aa15.22■□□□□ 0.03
SF3B1-204ENST00000414963 CCZ1BP86790 482 aa15.22■□□□□ 0.03
SF3B1-204ENST00000414963 CCZ1P86791 482 aaPredicted RBP15.22■□□□□ 0.03
SF3B1-204ENST00000414963 KLHL30Q0D2K2 578 aa15.22■□□□□ 0.03
SF3B1-204ENST00000414963 MAPK8IP2Q13387 824 aaPredicted RBP15.22■□□□□ 0.03
SF3B1-204ENST00000414963 TMEM270Q6UE05 265 aa15.22■□□□□ 0.03
SF3B1-204ENST00000414963 DSTYKQ6XUX3 929 aa15.22■□□□□ 0.03
SF3B1-204ENST00000414963 RBBP8NLQ8NC74 664 aaPredicted RBP15.22■□□□□ 0.03
SF3B1-204ENST00000414963 CHP1Q99653 195 aa15.22■□□□□ 0.03
SF3B1-204ENST00000414963 KCNF1Q9H3M0 494 aa15.22■□□□□ 0.03
SF3B1-204ENST00000414963 ARHGAP20Q9P2F6 1191 aa15.22■□□□□ 0.03
SF3B1-204ENST00000414963 HCSTQ9UBK5 93 aa15.22■□□□□ 0.03
SF3B1-204ENST00000414963 ADAM28Q9UKQ2 775 aa15.22■□□□□ 0.03
SF3B1-204ENST00000414963 KIAA1257Q9ULG3 409 aa15.22■□□□□ 0.03
SF3B1-204ENST00000414963 PCDHB8Q9UN66 801 aa15.22■□□□□ 0.03
SF3B1-204ENST00000414963 PRG3Q9Y2Y8 225 aaPredicted RBP15.22■□□□□ 0.03
SF3B1-204ENST00000414963 MRPL42Q9Y6G3 142 aaKnown RBP15.22■□□□□ 0.03
SF3B1-204ENST00000414963 F8W810 466 aa15.21■□□□□ 0.03
SF3B1-204ENST00000414963 SYN3O14994 580 aa15.21■□□□□ 0.03
SF3B1-204ENST00000414963 NRDCO43847 1150 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms