RNA–Protein interactions for RNA: ENST00000413725.5

SF1-206, Transcript of splicing factor 1, human

TSL 2

Gene SF1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF1-206	ENST00000413725	ASS1	P00966	412 aa	Known RBP	14.13	□□□□□ -0.15
SF1-206	ENST00000413725	ZNF18	P17022	549 aa		14.13	□□□□□ -0.15
SF1-206	ENST00000413725	TYMP	P19971	482 aa		14.13	□□□□□ -0.15
SF1-206	ENST00000413725	TKT	P29401	623 aa	Known RBP	14.13	□□□□□ -0.15
SF1-206	ENST00000413725	ERVFC1	P60507	584 aa		14.13	□□□□□ -0.15
SF1-206	ENST00000413725	DSG1	Q02413	1049 aa		14.13	□□□□□ -0.15
SF1-206	ENST00000413725	KRT31	Q15323	416 aa		14.13	□□□□□ -0.15
SF1-206	ENST00000413725	VWA3B	Q502W6	1294 aa		14.13	□□□□□ -0.15
SF1-206	ENST00000413725	WDR44	Q5JSH3	913 aa		14.13	□□□□□ -0.15
SF1-206	ENST00000413725	ANKS3	Q6ZW76	656 aa		14.13	□□□□□ -0.15
SF1-206	ENST00000413725	TAS1R1	Q7RTX1	841 aa		14.13	□□□□□ -0.15
SF1-206	ENST00000413725	LUZP1	Q86V48	1076 aa		14.13	□□□□□ -0.15
SF1-206	ENST00000413725	TOP6BL	Q8N6T0	577 aa		14.13	□□□□□ -0.15
SF1-206	ENST00000413725	RIN2	Q8WYP3	895 aa	Predicted RBP	14.13	□□□□□ -0.15
SF1-206	ENST00000413725	PPP2R3C	Q969Q6	453 aa		14.13	□□□□□ -0.15
SF1-206	ENST00000413725	XYLT2	Q9H1B5	865 aa		14.13	□□□□□ -0.15
SF1-206	ENST00000413725	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	14.13	□□□□□ -0.15
SF1-206	ENST00000413725	CHST7	Q9NS84	486 aa		14.13	□□□□□ -0.15
SF1-206	ENST00000413725	TAB2	Q9NYJ8	693 aa		14.13	□□□□□ -0.15
SF1-206	ENST00000413725	COQ4	Q9Y3A0	265 aa		14.13	□□□□□ -0.15
SF1-206	ENST00000413725	SNX9	Q9Y5X1	595 aa		14.13	□□□□□ -0.15
SF1-206	ENST00000413725	PTPRD	P23468	1912 aa		14.13	□□□□□ -0.15
SF1-206	ENST00000413725	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	14.12	□□□□□ -0.15
SF1-206	ENST00000413725	GTPBP10	A4D1E9	387 aa	Known RBP	14.12	□□□□□ -0.15
SF1-206	ENST00000413725		H7C4K7	107 aa		14.12	□□□□□ -0.15
SF1-206	ENST00000413725	C2CD2L	O14523	706 aa		14.12	□□□□□ -0.15
SF1-206	ENST00000413725	CXCL14	O95715	111 aa		14.12	□□□□□ -0.15
SF1-206	ENST00000413725	CYP11A1	P05108	521 aa		14.12	□□□□□ -0.15
SF1-206	ENST00000413725	IGFBP4	P22692	258 aa		14.12	□□□□□ -0.15
SF1-206	ENST00000413725	NOP14	P78316	857 aa	Known RBP	14.12	□□□□□ -0.15
SF1-206	ENST00000413725	YWHAH	Q04917	246 aa	Predicted RBP	14.12	□□□□□ -0.15
SF1-206	ENST00000413725	CAMK1	Q14012	370 aa		14.12	□□□□□ -0.15
SF1-206	ENST00000413725	PTPN14	Q15678	1187 aa		14.12	□□□□□ -0.15
SF1-206	ENST00000413725	PSMD5	Q16401	504 aa		14.12	□□□□□ -0.15
SF1-206	ENST00000413725	WDR72	Q3MJ13	1102 aa		14.12	□□□□□ -0.15
SF1-206	ENST00000413725	RTP2	Q5QGT7	225 aa		14.12	□□□□□ -0.15
SF1-206	ENST00000413725	VARS2	Q5ST30	1063 aa	Known RBP	14.12	□□□□□ -0.15
SF1-206	ENST00000413725	SCARA3	Q6AZY7	606 aa		14.12	□□□□□ -0.15
SF1-206	ENST00000413725	TMEM86A	Q8N2M4	240 aa		14.12	□□□□□ -0.15
SF1-206	ENST00000413725	SPATA18	Q8TC71	538 aa		14.12	□□□□□ -0.15
SF1-206	ENST00000413725	PIK3R5	Q8WYR1	880 aa		14.12	□□□□□ -0.15
SF1-206	ENST00000413725	B3GALT6	Q96L58	329 aa		14.12	□□□□□ -0.15
SF1-206	ENST00000413725	MMS19	Q96T76	1030 aa		14.12	□□□□□ -0.15
SF1-206	ENST00000413725	PI4K2A	Q9BTU6	479 aa		14.12	□□□□□ -0.15
SF1-206	ENST00000413725	EMILIN2	Q9BXX0	1053 aa		14.12	□□□□□ -0.15
SF1-206	ENST00000413725	HSD3B7	Q9H2F3	369 aa		14.12	□□□□□ -0.15
SF1-206	ENST00000413725	NDST4	Q9H3R1	872 aa		14.12	□□□□□ -0.15
SF1-206	ENST00000413725	NXF1	Q9UBU9	619 aa	Known RBP	14.12	□□□□□ -0.15
SF1-206	ENST00000413725	LIMA1	Q9UHB6	759 aa	Known RBP	14.12	□□□□□ -0.15
SF1-206	ENST00000413725	IRAK3	Q9Y616	596 aa		14.12	□□□□□ -0.15
SF1-206	ENST00000413725	POU3F3	P20264	500 aa	Predicted RBP	14.11	□□□□□ -0.15
SF1-206	ENST00000413725	IRS1	P35568	1242 aa		14.11	□□□□□ -0.15
SF1-206	ENST00000413725	MIIP	Q5JXC2	388 aa		14.11	□□□□□ -0.15
SF1-206	ENST00000413725	KIAA0319	Q5VV43	1072 aa		14.11	□□□□□ -0.15
SF1-206	ENST00000413725	OVOS1	Q6IE37	1185 aa		14.11	□□□□□ -0.15
SF1-206	ENST00000413725	ZNF280D	Q6N043	979 aa		14.11	□□□□□ -0.15
SF1-206	ENST00000413725	GBP6	Q6ZN66	633 aa		14.11	□□□□□ -0.15
SF1-206	ENST00000413725	DPH6	Q7L8W6	267 aa		14.11	□□□□□ -0.15
SF1-206	ENST00000413725	MRPL43	Q8N983	215 aa	Known RBP	14.11	□□□□□ -0.15
SF1-206	ENST00000413725	AUTS2	Q8WXX7	1259 aa		14.11	□□□□□ -0.15
SF1-206	ENST00000413725	SEMA4D	Q92854	862 aa		14.11	□□□□□ -0.15
SF1-206	ENST00000413725	FAXDC2	Q96IV6	333 aa		14.11	□□□□□ -0.15
SF1-206	ENST00000413725	CDX2	Q99626	313 aa	Predicted RBP	14.11	□□□□□ -0.15
SF1-206	ENST00000413725	OXCT2	Q9BYC2	517 aa	Predicted RBP	14.11	□□□□□ -0.15
SF1-206	ENST00000413725	VPS16	Q9H269	839 aa		14.11	□□□□□ -0.15
SF1-206	ENST00000413725	NSUN3	Q9H649	340 aa	Known RBP	14.11	□□□□□ -0.15
SF1-206	ENST00000413725	MTMR10	Q9NXD2	777 aa		14.11	□□□□□ -0.15
SF1-206	ENST00000413725	GCNT4	Q9P109	453 aa		14.11	□□□□□ -0.15
SF1-206	ENST00000413725	TIMM13	Q9Y5L4	95 aa	Predicted RBP	14.11	□□□□□ -0.15
SF1-206	ENST00000413725	C2orf71	A6NGG8	1288 aa		14.1	□□□□□ -0.15
SF1-206	ENST00000413725	OAZ2	O95190	189 aa		14.1	□□□□□ -0.15
SF1-206	ENST00000413725	ADH1A	P07327	375 aa		14.1	□□□□□ -0.15
SF1-206	ENST00000413725	FAM163B	P0C2L3	166 aa		14.1	□□□□□ -0.15
SF1-206	ENST00000413725	ATP1A3	P13637	1013 aa		14.1	□□□□□ -0.15
SF1-206	ENST00000413725	FOSL2	P15408	326 aa		14.1	□□□□□ -0.15
SF1-206	ENST00000413725	COPB1	P53618	953 aa	Known RBP	14.1	□□□□□ -0.15
SF1-206	ENST00000413725	ADGRE1	Q14246	886 aa		14.1	□□□□□ -0.15
SF1-206	ENST00000413725	EXOC3L4	Q17RC7	722 aa		14.1	□□□□□ -0.15
SF1-206	ENST00000413725	FILIP1L	Q4L180	1135 aa		14.1	□□□□□ -0.15
SF1-206	ENST00000413725	CTXN3	Q4LDR2	81 aa		14.1	□□□□□ -0.15
SF1-206	ENST00000413725	FKBP15	Q5T1M5	1219 aa		14.1	□□□□□ -0.15
SF1-206	ENST00000413725	WSCD1	Q658N2	575 aa		14.1	□□□□□ -0.15
SF1-206	ENST00000413725	SPOPL	Q6IQ16	392 aa		14.1	□□□□□ -0.15
SF1-206	ENST00000413725	PRSS55	Q6UWB4	352 aa	Predicted RBP	14.1	□□□□□ -0.15
SF1-206	ENST00000413725	ADGRF2	Q8IZF7	708 aa		14.1	□□□□□ -0.15
SF1-206	ENST00000413725	THEM5	Q8N1Q8	247 aa		14.1	□□□□□ -0.15
SF1-206	ENST00000413725	PDCL2	Q8N4E4	241 aa		14.1	□□□□□ -0.15
SF1-206	ENST00000413725	LNX1	Q8TBB1	728 aa	Predicted RBP	14.1	□□□□□ -0.15
SF1-206	ENST00000413725	MYLIP	Q8WY64	445 aa		14.1	□□□□□ -0.15
SF1-206	ENST00000413725	GUCD1	Q96NT3	240 aa		14.1	□□□□□ -0.15
SF1-206	ENST00000413725	NT5C1B	Q96P26	610 aa		14.1	□□□□□ -0.15
SF1-206	ENST00000413725	NIF3L1	Q9GZT8	377 aa		14.1	□□□□□ -0.15
SF1-206	ENST00000413725	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	14.1	□□□□□ -0.15	4e-8	■■■■■ 40.6
SF1-206	ENST00000413725	FNIP2	Q9P278	1114 aa		14.1	□□□□□ -0.15
SF1-206	ENST00000413725	MTRR	Q9UBK8	725 aa		14.1	□□□□□ -0.15
SF1-206	ENST00000413725	L1RE1	Q9UN81	338 aa		14.1	□□□□□ -0.15
SF1-206	ENST00000413725	POLI	Q9UNA4	740 aa		14.1	□□□□□ -0.15
SF1-206	ENST00000413725	BACE2	Q9Y5Z0	518 aa		14.1	□□□□□ -0.15
SF1-206	ENST00000413725	MTCH2	Q9Y6C9	303 aa		14.1	□□□□□ -0.15
SF1-206	ENST00000413725	FSD2	A1L4K1	749 aa		14.09	□□□□□ -0.15

Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms