RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 SV2CQ496J9 727 aa15.99■□□□□ 0.15
LIMS4-201ENST00000413601 RTL10Q7L3V2 364 aa15.99■□□□□ 0.15
LIMS4-201ENST00000413601 GET4Q7L5D6 327 aaPredicted RBP15.99■□□□□ 0.15
LIMS4-201ENST00000413601 TCEAL8Q8IYN2 117 aa15.99■□□□□ 0.15
LIMS4-201ENST00000413601 CSGALNACT2Q8N6G5 542 aa15.99■□□□□ 0.15
LIMS4-201ENST00000413601 XXYLT1Q8NBI6 393 aa15.99■□□□□ 0.15
LIMS4-201ENST00000413601 BORCS6Q96GS4 357 aa15.99■□□□□ 0.15
LIMS4-201ENST00000413601 ZNF560Q96MR9 790 aa15.99■□□□□ 0.15
LIMS4-201ENST00000413601 MYADMQ96S97 322 aa15.99■□□□□ 0.15
LIMS4-201ENST00000413601 MTMR12Q9C0I1 747 aa15.99■□□□□ 0.15
LIMS4-201ENST00000413601 INTS13Q9NVM9 706 aa15.99■□□□□ 0.15
LIMS4-201ENST00000413601 ARHGEF37A1IGU5 675 aa15.98■□□□□ 0.15
LIMS4-201ENST00000413601 OR6C75A6NL08 312 aa15.98■□□□□ 0.15
LIMS4-201ENST00000413601 PRR33A8MZF0 331 aa15.98■□□□□ 0.15
LIMS4-201ENST00000413601 LRG1P02750 347 aa15.98■□□□□ 0.15
LIMS4-201ENST00000413601 CYP11A1P05108 521 aa15.98■□□□□ 0.15
LIMS4-201ENST00000413601 KRT19P08727 400 aa15.98■□□□□ 0.15
LIMS4-201ENST00000413601 FSHRP23945 695 aa15.98■□□□□ 0.15
LIMS4-201ENST00000413601 SURF1Q15526 300 aa15.98■□□□□ 0.15
LIMS4-201ENST00000413601 OR5B17Q8NGF7 314 aa15.98■□□□□ 0.15
LIMS4-201ENST00000413601 CXorf38Q8TB03 319 aa15.98■□□□□ 0.15
LIMS4-201ENST00000413601 PGLYRP2Q96PD5 576 aa15.98■□□□□ 0.15
LIMS4-201ENST00000413601 TMEM209Q96SK2 561 aa15.98■□□□□ 0.15
LIMS4-201ENST00000413601 OXCT2Q9BYC2 517 aaPredicted RBP15.98■□□□□ 0.15
LIMS4-201ENST00000413601 SMOC2Q9H3U7 446 aa15.98■□□□□ 0.15
LIMS4-201ENST00000413601 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.98■□□□□ 0.15
LIMS4-201ENST00000413601 CGNQ9P2M7 1197 aaKnown RBP15.98■□□□□ 0.15
LIMS4-201ENST00000413601 DNMT3BQ9UBC3 853 aaKnown RBP15.98■□□□□ 0.15
LIMS4-201ENST00000413601 AFF4Q9UHB7 1163 aaKnown RBP15.98■□□□□ 0.15
LIMS4-201ENST00000413601 ITGA11Q9UKX5 1188 aa15.98■□□□□ 0.15
LIMS4-201ENST00000413601 SORCS3Q9UPU3 1222 aa15.98■□□□□ 0.15
LIMS4-201ENST00000413601 INSL5Q9Y5Q6 135 aa15.98■□□□□ 0.15
LIMS4-201ENST00000413601 VNN2O95498 520 aa15.97■□□□□ 0.15
LIMS4-201ENST00000413601 TNNC2P02585 160 aa15.97■□□□□ 0.15
LIMS4-201ENST00000413601 POU2F2P09086 479 aa15.97■□□□□ 0.15
LIMS4-201ENST00000413601 PNPLA4P41247 253 aa15.97■□□□□ 0.15
LIMS4-201ENST00000413601 CYP24A1Q07973 514 aa15.97■□□□□ 0.15
LIMS4-201ENST00000413601 BFSP1Q12934 665 aa15.97■□□□□ 0.15
LIMS4-201ENST00000413601 WSCD1Q658N2 575 aa15.97■□□□□ 0.15
LIMS4-201ENST00000413601 TRIM67Q6ZTA4 783 aa15.97■□□□□ 0.15
LIMS4-201ENST00000413601 METTL23Q86XA0 190 aa15.97■□□□□ 0.15
LIMS4-201ENST00000413601 C12orf56Q8IXR9 622 aa15.97■□□□□ 0.15
LIMS4-201ENST00000413601 FMR1NBQ8N0W7 255 aaPredicted RBP15.97■□□□□ 0.15
LIMS4-201ENST00000413601 OR10T2Q8NGX3 314 aa15.97■□□□□ 0.15
LIMS4-201ENST00000413601 CCDC47Q96A33 483 aaKnown RBP15.97■□□□□ 0.15
LIMS4-201ENST00000413601 ANKRD36BP1Q96IX9 119 aa15.97■□□□□ 0.15
LIMS4-201ENST00000413601 SIX4Q9UIU6 781 aa15.97■□□□□ 0.15
LIMS4-201ENST00000413601 DSEQ9UL01 958 aa15.97■□□□□ 0.15
LIMS4-201ENST00000413601 EXOC3O60645 756 aa15.96■□□□□ 0.15
LIMS4-201ENST00000413601 RHOBTB3O94955 611 aa15.96■□□□□ 0.15
LIMS4-201ENST00000413601 DLATP10515 647 aaKnown RBP15.96■□□□□ 0.15
LIMS4-201ENST00000413601 LAMP2P13473 410 aa15.96■□□□□ 0.15
LIMS4-201ENST00000413601 COL9A1P20849 921 aa15.96■□□□□ 0.15
LIMS4-201ENST00000413601 CDR1P51861 262 aa15.96■□□□□ 0.15
LIMS4-201ENST00000413601 RBP5P82980 135 aa15.96■□□□□ 0.15
LIMS4-201ENST00000413601 GPR17Q13304 367 aa15.96■□□□□ 0.15
LIMS4-201ENST00000413601 MTMR3Q13615 1198 aa15.96■□□□□ 0.15
LIMS4-201ENST00000413601 MYBPC2Q14324 1141 aa15.96■□□□□ 0.15
LIMS4-201ENST00000413601 PSMD6Q15008 389 aa15.96■□□□□ 0.15
LIMS4-201ENST00000413601 DUOXA2Q1HG44 320 aa15.96■□□□□ 0.15
LIMS4-201ENST00000413601 PABPC1LQ4VXU2 614 aaKnown RBP15.96■□□□□ 0.15
LIMS4-201ENST00000413601 WDR49Q8IV35 697 aa15.96■□□□□ 0.15
LIMS4-201ENST00000413601 LRRC52Q8N7C0 313 aa15.96■□□□□ 0.15
LIMS4-201ENST00000413601 ITFG1Q8TB96 612 aa15.96■□□□□ 0.15
LIMS4-201ENST00000413601 GOLGA5Q8TBA6 731 aa15.96■□□□□ 0.15
LIMS4-201ENST00000413601 CCDC127Q96BQ5 260 aa15.96■□□□□ 0.15
LIMS4-201ENST00000413601 RTP3Q9BQQ7 232 aa15.96■□□□□ 0.15
LIMS4-201ENST00000413601 KCTD10Q9H3F6 313 aa15.96■□□□□ 0.15
LIMS4-201ENST00000413601 KCNK12Q9HB15 430 aa15.96■□□□□ 0.15
LIMS4-201ENST00000413601 EPS15L1Q9UBC2 864 aa15.96■□□□□ 0.15
LIMS4-201ENST00000413601 MAFFQ9ULX9 164 aa15.96■□□□□ 0.15
LIMS4-201ENST00000413601 TRIOO75962 3097 aa15.96■□□□□ 0.15
LIMS4-201ENST00000413601 TMEM221A6NGB7 291 aa15.95■□□□□ 0.14
LIMS4-201ENST00000413601 M0R296 226 aa15.95■□□□□ 0.14
LIMS4-201ENST00000413601 RHOP08100 348 aa15.95■□□□□ 0.14
LIMS4-201ENST00000413601 PTPN2P17706 415 aa15.95■□□□□ 0.14
LIMS4-201ENST00000413601 TNNI1P19237 187 aa15.95■□□□□ 0.14
LIMS4-201ENST00000413601 SIGLEC14Q08ET2 396 aa15.95■□□□□ 0.14
LIMS4-201ENST00000413601 TWF1Q12792 350 aa15.95■□□□□ 0.14
LIMS4-201ENST00000413601 DUSP4Q13115 394 aa15.95■□□□□ 0.14
LIMS4-201ENST00000413601 PNOCQ13519 176 aa15.95■□□□□ 0.14
LIMS4-201ENST00000413601 SNW1Q13573 536 aaKnown RBP15.95■□□□□ 0.14
LIMS4-201ENST00000413601 HFE2Q6ZVN8 426 aa15.95■□□□□ 0.14
LIMS4-201ENST00000413601 THEM5Q8N1Q8 247 aa15.95■□□□□ 0.14
LIMS4-201ENST00000413601 ENGASEQ8NFI3 743 aa15.95■□□□□ 0.14
LIMS4-201ENST00000413601 ST13P5Q8NFI4 369 aaPredicted RBP15.95■□□□□ 0.14
LIMS4-201ENST00000413601 RSAD2Q8WXG1 361 aa15.95■□□□□ 0.14
LIMS4-201ENST00000413601 MFSD14AQ96MC6 490 aa15.95■□□□□ 0.14
LIMS4-201ENST00000413601 FNBP1Q96RU3 617 aa15.95■□□□□ 0.14
LIMS4-201ENST00000413601 CGRRF1Q99675 332 aa15.95■□□□□ 0.14
LIMS4-201ENST00000413601 CORO1BQ9BR76 489 aa15.95■□□□□ 0.14
LIMS4-201ENST00000413601 CRISPLD1Q9H336 500 aa15.95■□□□□ 0.14
LIMS4-201ENST00000413601 RAPGEFL1Q9UHV5 662 aa15.95■□□□□ 0.14
LIMS4-201ENST00000413601 MAPK8IP1Q9UQF2 711 aa15.95■□□□□ 0.14
LIMS4-201ENST00000413601 DENND4CQ5VZ89 1909 aa15.94■□□□□ 0.14
LIMS4-201ENST00000413601 MTMR11A4FU01 709 aa15.94■□□□□ 0.14
LIMS4-201ENST00000413601 PDXKO00764 312 aa15.94■□□□□ 0.14
LIMS4-201ENST00000413601 HUS1O60921 280 aa15.94■□□□□ 0.14
LIMS4-201ENST00000413601 CASP4P49662 377 aa15.94■□□□□ 0.14
LIMS4-201ENST00000413601 FAM160A1Q05DH4 1040 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms