RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 CACNA1EQ15878 2313 aa10.44□□□□□ -0.74
RFFL-203ENST00000413582 CCDC163A0A0D9SF12 145 aa10.44□□□□□ -0.74
RFFL-203ENST00000413582 C1QTNF9BB2RNN3 333 aa10.44□□□□□ -0.74
RFFL-203ENST00000413582 BTBD18B2RXH4 712 aa10.44□□□□□ -0.74
RFFL-203ENST00000413582 PRAMEF12O95522 483 aa10.44□□□□□ -0.74
RFFL-203ENST00000413582 OR4Q2P0C623 313 aa10.44□□□□□ -0.74
RFFL-203ENST00000413582 C1QTNF9P0C862 333 aa10.44□□□□□ -0.74
RFFL-203ENST00000413582 HOXB3P14651 431 aaPredicted RBP10.44□□□□□ -0.74
RFFL-203ENST00000413582 PROZP22891 400 aa10.44□□□□□ -0.74
RFFL-203ENST00000413582 RPA1P27694 616 aa10.44□□□□□ -0.74
RFFL-203ENST00000413582 MPLP40238 635 aa10.44□□□□□ -0.74
RFFL-203ENST00000413582 C1QBPQ07021 282 aaKnown RBP10.44□□□□□ -0.74
RFFL-203ENST00000413582 TNK2Q07912 1038 aa10.44□□□□□ -0.74
RFFL-203ENST00000413582 PLD1Q13393 1074 aa10.44□□□□□ -0.74
RFFL-203ENST00000413582 ARHGAP29Q52LW3 1261 aa10.44□□□□□ -0.74
RFFL-203ENST00000413582 TCEAL6Q6IPX3 200 aa10.44□□□□□ -0.74
RFFL-203ENST00000413582 PSAPL1Q6NUJ1 521 aa10.44□□□□□ -0.74
RFFL-203ENST00000413582 UNQ6494/PRO21346Q6UXR6 183 aa10.44□□□□□ -0.74
RFFL-203ENST00000413582 GAREM2Q75VX8 874 aa10.44□□□□□ -0.74
RFFL-203ENST00000413582 TAS1R3Q7RTX0 852 aa10.44□□□□□ -0.74
RFFL-203ENST00000413582 GPIHBP1Q8IV16 184 aa10.44□□□□□ -0.74
RFFL-203ENST00000413582 DIS3L2Q8IYB7 885 aaKnown RBP10.44□□□□□ -0.74
RFFL-203ENST00000413582 KIFAP3Q92845 792 aa10.44□□□□□ -0.74
RFFL-203ENST00000413582 TCEAL3Q969E4 200 aa10.44□□□□□ -0.74
RFFL-203ENST00000413582 OBP2AQ9NY56 170 aa10.44□□□□□ -0.74
RFFL-203ENST00000413582 TUBGCP4Q9UGJ1 667 aa10.44□□□□□ -0.74
RFFL-203ENST00000413582 TPCN1Q9ULQ1 816 aa10.44□□□□□ -0.74
RFFL-203ENST00000413582 PCDHGA5Q9Y5G8 931 aa10.44□□□□□ -0.74
RFFL-203ENST00000413582 DENND4CQ5VZ89 1909 aa10.44□□□□□ -0.74
RFFL-203ENST00000413582 KIAA1549LQ6ZVL6 1849 aa10.44□□□□□ -0.74
RFFL-203ENST00000413582 ASCC3Q8N3C0 2202 aaKnown RBP10.43□□□□□ -0.74
RFFL-203ENST00000413582 ABCA7Q8IZY2 2146 aa10.43□□□□□ -0.74
RFFL-203ENST00000413582 ANK1P16157 1881 aa10.43□□□□□ -0.74
RFFL-203ENST00000413582 MYO16Q9Y6X6 1858 aa10.43□□□□□ -0.74
RFFL-203ENST00000413582 K7ERI5 159 aa10.43□□□□□ -0.74
RFFL-203ENST00000413582 M0QZQ0 153 aa10.43□□□□□ -0.74
RFFL-203ENST00000413582 AKAP3O75969 853 aa10.43□□□□□ -0.74
RFFL-203ENST00000413582 OAZ2O95190 189 aa10.43□□□□□ -0.74
RFFL-203ENST00000413582 CCDC192P0DO97 292 aa10.43□□□□□ -0.74
RFFL-203ENST00000413582 MCF2P10911 925 aa10.43□□□□□ -0.74
RFFL-203ENST00000413582 MCM7P33993 719 aa10.43□□□□□ -0.74
RFFL-203ENST00000413582 CACNB1Q02641 598 aaPredicted RBP10.43□□□□□ -0.74
RFFL-203ENST00000413582 YWHAHQ04917 246 aaPredicted RBP10.43□□□□□ -0.74
RFFL-203ENST00000413582 ECM1Q16610 540 aa10.43□□□□□ -0.74
RFFL-203ENST00000413582 HAUS6Q7Z4H7 955 aa10.43□□□□□ -0.74
RFFL-203ENST00000413582 TMEM130Q8N3G9 435 aa10.43□□□□□ -0.74
RFFL-203ENST00000413582 TTC9BQ8N6N2 239 aa10.43□□□□□ -0.74
RFFL-203ENST00000413582 ERMNQ8TAM6 284 aa10.43□□□□□ -0.74
RFFL-203ENST00000413582 ACAP3Q96P50 834 aa10.43□□□□□ -0.74
RFFL-203ENST00000413582 PGLYRP2Q96PD5 576 aa10.43□□□□□ -0.74
RFFL-203ENST00000413582 TARS2Q9BW92 718 aaKnown RBP10.43□□□□□ -0.74
RFFL-203ENST00000413582 TMEM121BQ9BXQ6 578 aaPredicted RBP10.43□□□□□ -0.74
RFFL-203ENST00000413582 MRPL4Q9BYD3 311 aaKnown RBP10.43□□□□□ -0.74
RFFL-203ENST00000413582 SH2B1Q9NRF2 756 aaPredicted RBP10.43□□□□□ -0.74
RFFL-203ENST00000413582 ARHGAP28Q9P2N2 729 aa10.43□□□□□ -0.74
RFFL-203ENST00000413582 ZMIZ1Q9ULJ6 1067 aa10.43□□□□□ -0.74
RFFL-203ENST00000413582 WASF3Q9UPY6 502 aa10.43□□□□□ -0.74
RFFL-203ENST00000413582 ZNF638Q14966 1978 aaKnown RBP10.43□□□□□ -0.74
RFFL-203ENST00000413582 AKAP13Q12802 2813 aa10.43□□□□□ -0.74
RFFL-203ENST00000413582 OBSL1O75147 1896 aa10.42□□□□□ -0.74
RFFL-203ENST00000413582 DPYSL4O14531 572 aa10.42□□□□□ -0.74
RFFL-203ENST00000413582 HARSP12081 509 aaKnown RBP10.42□□□□□ -0.74
RFFL-203ENST00000413582 MUTP22033 750 aa10.42□□□□□ -0.74
RFFL-203ENST00000413582 NPTX2P47972 431 aa10.42□□□□□ -0.74
RFFL-203ENST00000413582 AARSP49588 968 aaKnown RBP eCLIP10.42□□□□□ -0.74
RFFL-203ENST00000413582 NOVA1P51513 510 aaKnown RBP10.42□□□□□ -0.74
RFFL-203ENST00000413582 FOSBP53539 338 aa10.42□□□□□ -0.74
RFFL-203ENST00000413582 EPHB3P54753 998 aa10.42□□□□□ -0.74
RFFL-203ENST00000413582 PEX3P56589 373 aa10.42□□□□□ -0.74
RFFL-203ENST00000413582 DUSP4Q13115 394 aa10.42□□□□□ -0.74
RFFL-203ENST00000413582 ITPRIPL2Q3MIP1 535 aa10.42□□□□□ -0.74
RFFL-203ENST00000413582 PLK5Q496M5 336 aa10.42□□□□□ -0.74
RFFL-203ENST00000413582 TMEM196Q5HYL7 178 aa10.42□□□□□ -0.74
RFFL-203ENST00000413582 GPR158Q5T848 1215 aa10.42□□□□□ -0.74
RFFL-203ENST00000413582 HAUS3Q68CZ6 603 aa10.42□□□□□ -0.74
RFFL-203ENST00000413582 RNF43Q68DV7 783 aa10.42□□□□□ -0.74
RFFL-203ENST00000413582 FSTL4Q6MZW2 842 aa10.42□□□□□ -0.74
RFFL-203ENST00000413582 MPZL3Q6UWV2 235 aa10.42□□□□□ -0.74
RFFL-203ENST00000413582 DAW1Q8N136 415 aa10.42□□□□□ -0.74
RFFL-203ENST00000413582 KDF1Q8NAX2 398 aaPredicted RBP10.42□□□□□ -0.74
RFFL-203ENST00000413582 BPIFB1Q8TDL5 484 aa10.42□□□□□ -0.74
RFFL-203ENST00000413582 PSMG2Q969U7 264 aa10.42□□□□□ -0.74
RFFL-203ENST00000413582 CHFRQ96EP1 664 aa10.42□□□□□ -0.74
RFFL-203ENST00000413582 ZC3H10Q96K80 434 aaKnown RBP10.42□□□□□ -0.74
RFFL-203ENST00000413582 TMEM209Q96SK2 561 aa10.42□□□□□ -0.74
RFFL-203ENST00000413582 EDEM2Q9BV94 578 aa10.42□□□□□ -0.74
RFFL-203ENST00000413582 BHMT2Q9H2M3 363 aa10.42□□□□□ -0.74
RFFL-203ENST00000413582 TMEM134Q9H6X4 195 aa10.42□□□□□ -0.74
RFFL-203ENST00000413582 VPS45Q9NRW7 570 aa10.42□□□□□ -0.74
RFFL-203ENST00000413582 TIMM13Q9Y5L4 95 aaPredicted RBP10.42□□□□□ -0.74
RFFL-203ENST00000413582 MYH11P35749 1972 aa10.42□□□□□ -0.74
RFFL-203ENST00000413582 MTMR11A4FU01 709 aa10.41□□□□□ -0.74
RFFL-203ENST00000413582 OR6C75A6NL08 312 aa10.41□□□□□ -0.74
RFFL-203ENST00000413582 CCDC169A6NNP5 214 aa10.41□□□□□ -0.74
RFFL-203ENST00000413582 GIPC1O14908 333 aa10.41□□□□□ -0.74
RFFL-203ENST00000413582 SOAT2O75908 522 aa10.41□□□□□ -0.74
RFFL-203ENST00000413582 OR52Z1P0C646 297 aa10.41□□□□□ -0.74
RFFL-203ENST00000413582 GABRR2P28476 465 aa10.41□□□□□ -0.74
RFFL-203ENST00000413582 MARCKSP29966 332 aaPredicted RBP10.41□□□□□ -0.74
RFFL-203ENST00000413582 WEE1P30291 646 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms