RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 ATG16L2Q8NAA4 619 aa5.23□□□□□ -1.57
BRCA1-204ENST00000412061 REPS2Q8NFH8 660 aa5.23□□□□□ -1.57
BRCA1-204ENST00000412061 SLC30A5Q8TAD4 765 aa5.23□□□□□ -1.57
BRCA1-204ENST00000412061 MDM1Q8TC05 714 aa5.23□□□□□ -1.57
BRCA1-204ENST00000412061 GPHA2Q96T91 129 aa5.23□□□□□ -1.57
BRCA1-204ENST00000412061 BARD1Q99728 777 aaKnown RBP5.23□□□□□ -1.57
BRCA1-204ENST00000412061 PTPN18Q99952 460 aa5.23□□□□□ -1.57
BRCA1-204ENST00000412061 VRK1Q99986 396 aaPredicted RBP5.23□□□□□ -1.57
BRCA1-204ENST00000412061 SORBS1Q9BX66 1292 aaKnown RBP5.23□□□□□ -1.57
BRCA1-204ENST00000412061 MAGEH1Q9H213 219 aa5.23□□□□□ -1.57
BRCA1-204ENST00000412061 ZMAT3Q9HA38 289 aaKnown RBP5.23□□□□□ -1.57
BRCA1-204ENST00000412061 ZNF287Q9HBT7 754 aa5.23□□□□□ -1.57
BRCA1-204ENST00000412061 PNPLA8Q9NP80 782 aa5.23□□□□□ -1.57
BRCA1-204ENST00000412061 IL23AQ9NPF7 189 aa5.23□□□□□ -1.57
BRCA1-204ENST00000412061 LRFN1Q9P244 771 aa5.23□□□□□ -1.57
BRCA1-204ENST00000412061 STAP2Q9UGK3 403 aa5.23□□□□□ -1.57
BRCA1-204ENST00000412061 FEZ2Q9UHY8 353 aaPredicted RBP5.23□□□□□ -1.57
BRCA1-204ENST00000412061 TMX2Q9Y320 296 aa5.23□□□□□ -1.57
BRCA1-204ENST00000412061 ADAMTS20P59510 1910 aa5.23□□□□□ -1.57
BRCA1-204ENST00000412061 RPGRIP1LQ68CZ1 1315 aa5.23□□□□□ -1.57
BRCA1-204ENST00000412061 A0A1W2PRQ8 180 aa5.23□□□□□ -1.57
BRCA1-204ENST00000412061 H3BUI4 141 aa5.23□□□□□ -1.57
BRCA1-204ENST00000412061 AREL1O15033 823 aa5.23□□□□□ -1.57
BRCA1-204ENST00000412061 FRS3O43559 492 aa5.23□□□□□ -1.57
BRCA1-204ENST00000412061 B4GALT3O60512 393 aa5.23□□□□□ -1.57
BRCA1-204ENST00000412061 SASH1O94885 1247 aa5.23□□□□□ -1.57
BRCA1-204ENST00000412061 IL18RAPO95256 599 aa5.23□□□□□ -1.57
BRCA1-204ENST00000412061 PARP1P09874 1014 aaKnown RBP5.23□□□□□ -1.57
BRCA1-204ENST00000412061 FTH1P19P0C7X4 201 aa5.23□□□□□ -1.57
BRCA1-204ENST00000412061 TYRP14679 529 aa5.23□□□□□ -1.57
BRCA1-204ENST00000412061 VEGFAP15692 232 aaPredicted RBP5.23□□□□□ -1.57
BRCA1-204ENST00000412061 MALP21145 153 aa5.23□□□□□ -1.57
BRCA1-204ENST00000412061 ALDH9A1P49189 494 aa5.23□□□□□ -1.57
BRCA1-204ENST00000412061 FLT3LGP49771 235 aa5.23□□□□□ -1.57
BRCA1-204ENST00000412061 GZMKP49863 264 aa5.23□□□□□ -1.57
BRCA1-204ENST00000412061 CTXN1P60606 82 aa5.23□□□□□ -1.57
BRCA1-204ENST00000412061 RAC3P60763 192 aa5.23□□□□□ -1.57
BRCA1-204ENST00000412061 NKX6-1P78426 367 aaPredicted RBP5.23□□□□□ -1.57
BRCA1-204ENST00000412061 ATP8B2P98198 1209 aa5.23□□□□□ -1.57
BRCA1-204ENST00000412061 GALNT1Q10472 559 aaPredicted RBP5.23□□□□□ -1.57
BRCA1-204ENST00000412061 GRM1Q13255 1194 aa5.23□□□□□ -1.57
BRCA1-204ENST00000412061 SNAPC2Q13487 334 aa5.23□□□□□ -1.57
BRCA1-204ENST00000412061 FGL2Q14314 439 aa5.23□□□□□ -1.57
BRCA1-204ENST00000412061 PFKFB4Q16877 469 aa5.23□□□□□ -1.57
BRCA1-204ENST00000412061 MPEG1Q2M385 716 aa5.23□□□□□ -1.57
BRCA1-204ENST00000412061 ARL13BQ3SXY8 428 aa5.23□□□□□ -1.57
BRCA1-204ENST00000412061 SPECC1Q5M775 1068 aa5.23□□□□□ -1.57
BRCA1-204ENST00000412061 GPATCH4Q5T3I0 446 aaKnown RBP5.23□□□□□ -1.57
BRCA1-204ENST00000412061 KLHDC7AQ5VTJ3 777 aa5.23□□□□□ -1.57
BRCA1-204ENST00000412061 CREBRFQ8IUR6 639 aa5.23□□□□□ -1.57
BRCA1-204ENST00000412061 LGI4Q8N135 537 aa5.23□□□□□ -1.57
BRCA1-204ENST00000412061 ESX1Q8N693 406 aa5.23□□□□□ -1.57
BRCA1-204ENST00000412061 FBXO18Q8NFZ0 1043 aa5.23□□□□□ -1.57
BRCA1-204ENST00000412061 CFHR4Q92496 578 aa5.23□□□□□ -1.57
BRCA1-204ENST00000412061 SLC35A4Q96G79 324 aa5.23□□□□□ -1.57
BRCA1-204ENST00000412061 RMDN3Q96TC7 470 aa5.23□□□□□ -1.57
BRCA1-204ENST00000412061 ENKD1Q9H0I2 346 aa5.23□□□□□ -1.57
BRCA1-204ENST00000412061 ALDH8A1Q9H2A2 487 aaPredicted RBP5.23□□□□□ -1.57
BRCA1-204ENST00000412061 WDCPQ9H6R7 721 aa5.23□□□□□ -1.57
BRCA1-204ENST00000412061 PLEKHA5Q9HAU0 1116 aa5.23□□□□□ -1.57
BRCA1-204ENST00000412061 MSL2Q9HCI7 577 aa5.23□□□□□ -1.57
BRCA1-204ENST00000412061 PNPOQ9NVS9 261 aa5.23□□□□□ -1.57
BRCA1-204ENST00000412061 ABCF2Q9UG63 623 aa5.23□□□□□ -1.57
BRCA1-204ENST00000412061 OGDHLQ9ULD0 1010 aa5.23□□□□□ -1.57
BRCA1-204ENST00000412061 USP19O94966 1318 aa5.22□□□□□ -1.57
BRCA1-204ENST00000412061 F8W8V4 182 aa5.22□□□□□ -1.57
BRCA1-204ENST00000412061 IRAK2O43187 625 aa5.22□□□□□ -1.57
BRCA1-204ENST00000412061 NOBOXO60393 691 aa5.22□□□□□ -1.57
BRCA1-204ENST00000412061 ALOX15P16050 662 aaPredicted RBP5.22□□□□□ -1.57
BRCA1-204ENST00000412061 FPR1P21462 350 aa5.22□□□□□ -1.57
BRCA1-204ENST00000412061 PCSK1P29120 753 aa5.22□□□□□ -1.57
BRCA1-204ENST00000412061 ITGA8P53708 1063 aa5.22□□□□□ -1.57
BRCA1-204ENST00000412061 PTH1RQ03431 593 aa5.22□□□□□ -1.57
BRCA1-204ENST00000412061 RIN1Q13671 783 aa5.22□□□□□ -1.57
BRCA1-204ENST00000412061 DAG1Q14118 895 aa5.22□□□□□ -1.57
BRCA1-204ENST00000412061 ZACNQ401N2 412 aa5.22□□□□□ -1.57
BRCA1-204ENST00000412061 SLC45A4Q5BKX6 768 aa5.22□□□□□ -1.57
BRCA1-204ENST00000412061 FAM47AQ5JRC9 791 aa5.22□□□□□ -1.57
BRCA1-204ENST00000412061 ITPRIPL1Q6GPH6 555 aa5.22□□□□□ -1.57
BRCA1-204ENST00000412061 RINLQ6ZS11 566 aa5.22□□□□□ -1.57
BRCA1-204ENST00000412061 ARHGEF18Q6ZSZ5 1173 aa5.22□□□□□ -1.57
BRCA1-204ENST00000412061 ADGRE4PQ86SQ3 457 aa5.22□□□□□ -1.57
BRCA1-204ENST00000412061 SP8Q8IXZ3 490 aa5.22□□□□□ -1.57
BRCA1-204ENST00000412061 RNF152Q8N8N0 203 aa5.22□□□□□ -1.57
BRCA1-204ENST00000412061 SHCBP1Q8NEM2 672 aa5.22□□□□□ -1.57
BRCA1-204ENST00000412061 STON2Q8WXE9 905 aa5.22□□□□□ -1.57
BRCA1-204ENST00000412061 ASB12Q8WXK4 309 aa5.22□□□□□ -1.57
BRCA1-204ENST00000412061 ZNF566Q969W8 418 aa5.22□□□□□ -1.57
BRCA1-204ENST00000412061 FAM167BQ9BTA0 163 aa5.22□□□□□ -1.57
BRCA1-204ENST00000412061 UNKQ9C0B0 810 aaKnown RBP5.22□□□□□ -1.57
BRCA1-204ENST00000412061 C12orf65Q9H3J6 166 aaKnown RBP5.22□□□□□ -1.57
BRCA1-204ENST00000412061 UBN1Q9NPG3 1134 aa5.22□□□□□ -1.57
BRCA1-204ENST00000412061 DACT1Q9NYF0 836 aa5.22□□□□□ -1.57
BRCA1-204ENST00000412061 TMEM98Q9Y2Y6 226 aa5.22□□□□□ -1.57
BRCA1-204ENST00000412061 ACTL7AQ9Y615 435 aa5.22□□□□□ -1.57
BRCA1-204ENST00000412061 A0A1W2PRX2 142 aa5.21□□□□□ -1.58
BRCA1-204ENST00000412061 GOLGA6L3A6NEY3 463 aa5.21□□□□□ -1.58
BRCA1-204ENST00000412061 TISP43B9A030 160 aa5.21□□□□□ -1.58
BRCA1-204ENST00000412061 B9A039 149 aa5.21□□□□□ -1.58
BRCA1-204ENST00000412061 PHGDHO43175 533 aaKnown RBP5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms