RNA–Protein interactions for RNA: ENST00000411827.1

CDC42-204, Transcript of cell division cycle 42, humanhuman

TSL 3

Gene CDC42, Length 597 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-204ENST00000411827 APOBEC3GQ9HC16 384 aaKnown RBP19.98■□□□□ 0.79
CDC42-204ENST00000411827 PCDHB8Q9UN66 801 aa19.98■□□□□ 0.79
CDC42-204ENST00000411827 PRG3Q9Y2Y8 225 aaPredicted RBP19.98■□□□□ 0.79
CDC42-204ENST00000411827 ASPAP45381 313 aa19.97■□□□□ 0.79
CDC42-204ENST00000411827 GSDMDP57764 484 aa19.97■□□□□ 0.79
CDC42-204ENST00000411827 BPIFB4P59827 614 aa19.97■□□□□ 0.79
CDC42-204ENST00000411827 LRMPQ12912 555 aa19.97■□□□□ 0.79
CDC42-204ENST00000411827 BMS1Q14692 1282 aaKnown RBP19.97■□□□□ 0.79
CDC42-204ENST00000411827 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.97■□□□□ 0.79
CDC42-204ENST00000411827 TMCO2Q7Z6W1 182 aaPredicted RBP19.97■□□□□ 0.79
CDC42-204ENST00000411827 UNC93AQ86WB7 457 aa19.97■□□□□ 0.79
CDC42-204ENST00000411827 SHC3Q92529 594 aa19.97■□□□□ 0.79
CDC42-204ENST00000411827 TATDN2Q93075 761 aa19.97■□□□□ 0.79
CDC42-204ENST00000411827 PAAF1Q9BRP4 392 aa19.97■□□□□ 0.79
CDC42-204ENST00000411827 PUF60Q9UHX1 559 aaKnown RBP19.97■□□□□ 0.79
CDC42-204ENST00000411827 CNTN6Q9UQ52 1028 aa19.97■□□□□ 0.79
CDC42-204ENST00000411827 LZTS1Q9Y250 596 aa19.97■□□□□ 0.79
CDC42-204ENST00000411827 LAMA3Q16787 3333 aa19.97■□□□□ 0.79
CDC42-204ENST00000411827 PPEF2O14830 753 aa19.96■□□□□ 0.79
CDC42-204ENST00000411827 SPTLC1O15269 473 aa19.96■□□□□ 0.79
CDC42-204ENST00000411827 B4GALT3O60512 393 aa19.96■□□□□ 0.79
CDC42-204ENST00000411827 BMPR1AP36894 532 aa19.96■□□□□ 0.79
CDC42-204ENST00000411827 STAT1P42224 750 aa19.96■□□□□ 0.79
CDC42-204ENST00000411827 PLCB3Q01970 1234 aa19.96■□□□□ 0.79
CDC42-204ENST00000411827 UBE3AQ05086 875 aa19.96■□□□□ 0.79
CDC42-204ENST00000411827 INCA1Q0VD86 236 aa19.96■□□□□ 0.79
CDC42-204ENST00000411827 TBX2Q13207 712 aaPredicted RBP19.96■□□□□ 0.79
CDC42-204ENST00000411827 TIGD5Q53EQ6 642 aa19.96■□□□□ 0.79
CDC42-204ENST00000411827 IQCEQ6IPM2 695 aa19.96■□□□□ 0.79
CDC42-204ENST00000411827 C3orf58Q8NDZ4 430 aa19.96■□□□□ 0.79
CDC42-204ENST00000411827 PRO3102Q9H379 93 aa19.96■□□□□ 0.79
CDC42-204ENST00000411827 KIAA1257Q9ULG3 409 aa19.96■□□□□ 0.79
CDC42-204ENST00000411827 BARX2Q9UMQ3 279 aaPredicted RBP19.96■□□□□ 0.79
CDC42-204ENST00000411827 SSX2IPQ9Y2D8 614 aa19.96■□□□□ 0.79
CDC42-204ENST00000411827 C5orf67F2Z3F1 127 aa19.95■□□□□ 0.78
CDC42-204ENST00000411827 GYPCP04921 128 aa19.95■□□□□ 0.78
CDC42-204ENST00000411827 WARSP23381 471 aaKnown RBP19.95■□□□□ 0.78
CDC42-204ENST00000411827 SMAD3P84022 425 aaKnown RBP19.95■□□□□ 0.78
CDC42-204ENST00000411827 RAPGEF1Q13905 1077 aa19.95■□□□□ 0.78
CDC42-204ENST00000411827 DRAP1Q14919 205 aaPredicted RBP19.95■□□□□ 0.78
CDC42-204ENST00000411827 SOWAHAQ2M3V2 549 aa19.95■□□□□ 0.78
CDC42-204ENST00000411827 SPOPLQ6IQ16 392 aa19.95■□□□□ 0.78
CDC42-204ENST00000411827 FUT10Q6P4F1 479 aa19.95■□□□□ 0.78
CDC42-204ENST00000411827 CD300LGQ6UXG3 332 aa19.95■□□□□ 0.78
CDC42-204ENST00000411827 RRAGAQ7L523 313 aa19.95■□□□□ 0.78
CDC42-204ENST00000411827 DDX53Q86TM3 631 aaKnown RBP19.95■□□□□ 0.78
CDC42-204ENST00000411827 ARHGEF19Q8IW93 802 aa19.95■□□□□ 0.78
CDC42-204ENST00000411827 THEM5Q8N1Q8 247 aa19.95■□□□□ 0.78
CDC42-204ENST00000411827 OR8K1Q8NGG5 319 aa19.95■□□□□ 0.78
CDC42-204ENST00000411827 TNIP3Q96KP6 325 aa19.95■□□□□ 0.78
CDC42-204ENST00000411827 SNX25Q9H3E2 840 aa19.95■□□□□ 0.78
CDC42-204ENST00000411827 CISHQ9NSE2 258 aa19.95■□□□□ 0.78
CDC42-204ENST00000411827 ZNHIT6Q9NWK9 470 aaKnown RBP19.95■□□□□ 0.78
CDC42-204ENST00000411827 MARCH5Q9NX47 278 aa19.95■□□□□ 0.78
CDC42-204ENST00000411827 COLQQ9Y215 455 aaPredicted RBP19.95■□□□□ 0.78
CDC42-204ENST00000411827 FHOD1Q9Y613 1164 aa19.95■□□□□ 0.78
CDC42-204ENST00000411827 BZW2Q9Y6E2 419 aaKnown RBP19.95■□□□□ 0.78
CDC42-204ENST00000411827 LINC01553A4QN01 128 aa19.94■□□□□ 0.78
CDC42-204ENST00000411827 AKR1B15C9JRZ8 316 aaPredicted RBP19.94■□□□□ 0.78
CDC42-204ENST00000411827 H7C4K7 107 aa19.94■□□□□ 0.78
CDC42-204ENST00000411827 GABRDO14764 452 aa19.94■□□□□ 0.78
CDC42-204ENST00000411827 OAZ2O95190 189 aa19.94■□□□□ 0.78
CDC42-204ENST00000411827 EFEMP2O95967 443 aa19.94■□□□□ 0.78
CDC42-204ENST00000411827 PCSK1P29120 753 aa19.94■□□□□ 0.78
CDC42-204ENST00000411827 KLK7P49862 253 aa19.94■□□□□ 0.78
CDC42-204ENST00000411827 JAM2P57087 298 aa19.94■□□□□ 0.78
CDC42-204ENST00000411827 CREMQ03060 361 aa19.94■□□□□ 0.78
CDC42-204ENST00000411827 CCDC173Q0VFZ6 552 aa19.94■□□□□ 0.78
CDC42-204ENST00000411827 ARID5BQ14865 1188 aa19.94■□□□□ 0.78
CDC42-204ENST00000411827 USP41Q3LFD5 358 aa19.94■□□□□ 0.78
CDC42-204ENST00000411827 FAM71AQ8IYT1 594 aa19.94■□□□□ 0.78
CDC42-204ENST00000411827 ADGRF2Q8IZF7 708 aa19.94■□□□□ 0.78
CDC42-204ENST00000411827 PDLIM2Q96JY6 352 aa19.94■□□□□ 0.78
CDC42-204ENST00000411827 KREMEN1Q96MU8 473 aa19.94■□□□□ 0.78
CDC42-204ENST00000411827 TGS1Q96RS0 853 aaKnown RBP19.94■□□□□ 0.78
CDC42-204ENST00000411827 C11orf84Q9BUA3 381 aaPredicted RBP19.94■□□□□ 0.78
CDC42-204ENST00000411827 F8VZ95 297 aa19.93■□□□□ 0.78
CDC42-204ENST00000411827 LRRN2O75325 713 aa19.93■□□□□ 0.78
CDC42-204ENST00000411827 PAEPP09466 180 aa19.93■□□□□ 0.78
CDC42-204ENST00000411827 FERP16591 822 aa19.93■□□□□ 0.78
CDC42-204ENST00000411827 FGFR3P22607 806 aa19.93■□□□□ 0.78
CDC42-204ENST00000411827 HNRNPH3P31942 346 aaKnown RBP19.93■□□□□ 0.78
CDC42-204ENST00000411827 KRT9P35527 623 aa19.93■□□□□ 0.78
CDC42-204ENST00000411827 SOX5P35711 763 aa19.93■□□□□ 0.78
CDC42-204ENST00000411827 GNL1P36915 607 aaPredicted RBP19.93■□□□□ 0.78
CDC42-204ENST00000411827 ANKS3Q6ZW76 656 aa19.93■□□□□ 0.78
CDC42-204ENST00000411827 PDCL2Q8N4E4 241 aa19.93■□□□□ 0.78
CDC42-204ENST00000411827 BAP1Q92560 729 aa19.93■□□□□ 0.78
CDC42-204ENST00000411827 TTPALQ9BTX7 342 aa19.93■□□□□ 0.78
CDC42-204ENST00000411827 NT5C1AQ9BXI3 368 aa19.93■□□□□ 0.78
CDC42-204ENST00000411827 NLRC4Q9NPP4 1024 aa19.93■□□□□ 0.78
CDC42-204ENST00000411827 AIPL1Q9NZN9 384 aa19.93■□□□□ 0.78
CDC42-204ENST00000411827 PCDH10Q9P2E7 1040 aa19.93■□□□□ 0.78
CDC42-204ENST00000411827 L1RE1Q9UN81 338 aa19.93■□□□□ 0.78
CDC42-204ENST00000411827 POLIQ9UNA4 740 aa19.93■□□□□ 0.78
CDC42-204ENST00000411827 PTPRSQ13332 1948 aa19.93■□□□□ 0.78
CDC42-204ENST00000411827 RBAK-RBAKDNI3L0D1 243 aa19.92■□□□□ 0.78
CDC42-204ENST00000411827 EPHB6O15197 1021 aa19.92■□□□□ 0.78
CDC42-204ENST00000411827 MFAP3LO75121 409 aa19.92■□□□□ 0.78
CDC42-204ENST00000411827 CILPO75339 1184 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms