RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 PPP2R5BQ15173 497 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 PIK3R3Q92569 461 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 USP7Q93009 1102 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 ANTXR1Q9H6X2 564 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 RMI1Q9H9A7 625 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 RASSF1Q9NS23 344 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 C1orf112Q9NSG2 853 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 SPATA7Q9P0W8 599 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 KRT36O76013 467 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 NOL4O94818 638 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 ALBP02768 609 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 ANPEPP15144 967 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 PTPN12Q05209 780 aaKnown RBP4.78□□□□□ -1.64
PTPN13-202ENST00000411767 NSUN2Q08J23 767 aaKnown RBP eCLIP4.78□□□□□ -1.64
PTPN13-202ENST00000411767 DPYSQ14117 519 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 GINS1Q14691 196 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 ZNF284Q2VY69 593 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 ODR4Q5SWX8 454 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 ATAD3CQ5T2N8 411 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 SKA3Q8IX90 412 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 LNX2Q8N448 690 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 SETD9Q8NE22 299 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 OR4C6Q8NH72 309 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 LENG1Q96BZ8 264 aaPredicted RBP4.78□□□□□ -1.64
PTPN13-202ENST00000411767 KLHL32Q96NJ5 620 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 MYL10Q9BUA6 226 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 CDH19Q9H159 772 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 SLC24A3Q9HC58 644 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 TMEM138Q9NPI0 162 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 SLC35C2Q9NQQ7 365 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 CYP26B1Q9NR63 512 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 AASDHPPTQ9NRN7 309 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 DUSP22Q9NRW4 184 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 TLR7Q9NYK1 1049 aaKnown RBP4.78□□□□□ -1.64
PTPN13-202ENST00000411767 NUP50Q9UKX7 468 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 CLEC11AQ9Y240 323 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 V9GY48 417 aaPredicted RBP4.78□□□□□ -1.64
PTPN13-202ENST00000411767 SMARCA2P51531 1590 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 TTC34A8MYJ7 566 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 KCNK3O14649 394 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 IFNA10P01566 189 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 GUCY2FP51841 1108 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 TFAMQ00059 246 aaKnown RBP4.78□□□□□ -1.64
PTPN13-202ENST00000411767 OTUD4Q01804 1114 aaKnown RBP4.78□□□□□ -1.64
PTPN13-202ENST00000411767 LRRC74AQ0VAA2 488 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 PLD1Q13393 1074 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 KCTD19Q17RG1 926 aaPredicted RBP4.78□□□□□ -1.64
PTPN13-202ENST00000411767 PCNX4Q63HM2 1172 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 ESPNLQ6ZVH7 1005 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 EPHX4Q8IUS5 362 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 CROCCP3Q8IVE0 287 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 ZBTB8OSQ8IWT0 167 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 ULK2Q8IYT8 1036 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 ABI1Q8IZP0 508 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 SPERTQ8NA61 448 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 CEP170P1Q96L14 293 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 Q96MT0 163 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 ALPK1Q96QP1 1244 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 CAMKK2Q96RR4 588 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 INTS10Q9NVR2 710 aaKnown RBP4.78□□□□□ -1.64
PTPN13-202ENST00000411767 NCKAP1Q9Y2A7 1128 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 CLRN2A0PK11 232 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 TRIM3O75382 744 aaPredicted RBP4.78□□□□□ -1.64
PTPN13-202ENST00000411767 PGK1P00558 417 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 WEE2P0C1S8 567 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 CASRP41180 1078 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 MAPK12P53778 367 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 RAB5BP61020 215 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 RBL2Q08999 1139 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 TDGQ13569 410 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 TMED2Q15363 201 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 AOC3Q16853 763 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 TMEM63BQ5T3F8 832 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 PACS1Q6VY07 963 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 FAM220AQ7Z4H9 259 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 PRPF39Q86UA1 669 aaKnown RBP4.78□□□□□ -1.64
PTPN13-202ENST00000411767 RFX6Q8HWS3 928 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 LPCAT1Q8NF37 534 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 PLEKHO2Q8TD55 490 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 CYGBQ8WWM9 190 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 S100ZQ8WXG8 99 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 WNK4Q96J92 1243 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 ZNF594Q96JF6 807 aaPredicted RBP4.78□□□□□ -1.64
PTPN13-202ENST00000411767 YME1L1Q96TA2 773 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 BHLHE41Q9C0J9 482 aaPredicted RBP4.78□□□□□ -1.64
PTPN13-202ENST00000411767 PDP2Q9P2J9 529 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 RRP15Q9Y3B9 282 aaKnown RBP4.78□□□□□ -1.64
PTPN13-202ENST00000411767 CCDC182A6NF36 153 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 SGK1O00141 431 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 NEMP1O14524 444 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 DPYSL4O14531 572 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 CLCN1P35523 988 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 TBC1D25Q3MII6 688 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 TIMM50Q3ZCQ8 353 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 ACCSLQ4AC99 568 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 NIPAL3Q6P499 406 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 PCYOX1LQ8NBM8 494 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 C17orf50Q8WW18 174 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 BBS4Q96RK4 519 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 MED15Q96RN5 788 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms