RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 CRHR2Q13324 411 aa3.19□□□□□ -1.9
RNU6-1140P-201ENST00000410517 UBE3CQ15386 1083 aa3.19□□□□□ -1.9
RNU6-1140P-201ENST00000410517 VPS72Q15906 364 aa3.19□□□□□ -1.9
RNU6-1140P-201ENST00000410517 KIAA0753Q2KHM9 967 aa3.19□□□□□ -1.9
RNU6-1140P-201ENST00000410517 COBLL1Q53SF7 1204 aa3.19□□□□□ -1.9
RNU6-1140P-201ENST00000410517 FAM47AQ5JRC9 791 aa3.19□□□□□ -1.9
RNU6-1140P-201ENST00000410517 CHST15Q7LFX5 561 aaPredicted RBP3.19□□□□□ -1.9
RNU6-1140P-201ENST00000410517 APBB1IPQ7Z5R6 666 aaPredicted RBP3.19□□□□□ -1.9
RNU6-1140P-201ENST00000410517 FAM83AQ86UY5 434 aa3.19□□□□□ -1.9
RNU6-1140P-201ENST00000410517 VRK3Q8IV63 474 aa3.19□□□□□ -1.9
RNU6-1140P-201ENST00000410517 ANKRD35Q8N283 1001 aa3.19□□□□□ -1.9
RNU6-1140P-201ENST00000410517 AFAP1Q8N556 730 aa3.19□□□□□ -1.9
RNU6-1140P-201ENST00000410517 ANKRD53Q8N9V6 530 aa3.19□□□□□ -1.9
RNU6-1140P-201ENST00000410517 ZBTB34Q8NCN2 500 aa3.19□□□□□ -1.9
RNU6-1140P-201ENST00000410517 SHCBP1Q8NEM2 672 aa3.19□□□□□ -1.9
RNU6-1140P-201ENST00000410517 PJA1Q8NG27 643 aa3.19□□□□□ -1.9
RNU6-1140P-201ENST00000410517 KLHDC4Q8TBB5 520 aa3.19□□□□□ -1.9
RNU6-1140P-201ENST00000410517 CCHCR1Q8TD31 782 aa3.19□□□□□ -1.9
RNU6-1140P-201ENST00000410517 SMCR8Q8TEV9 937 aaPredicted RBP3.19□□□□□ -1.9
RNU6-1140P-201ENST00000410517 MOGAT1Q96PD6 335 aa3.19□□□□□ -1.9
RNU6-1140P-201ENST00000410517 ACO2Q99798 780 aaKnown RBP3.19□□□□□ -1.9
RNU6-1140P-201ENST00000410517 PDCD2LQ9BRP1 358 aa3.19□□□□□ -1.9
RNU6-1140P-201ENST00000410517 FDXACB1Q9BRP7 624 aaPredicted RBP3.19□□□□□ -1.9
RNU6-1140P-201ENST00000410517 PACSIN1Q9BY11 444 aa3.19□□□□□ -1.9
RNU6-1140P-201ENST00000410517 BTBD1Q9H0C5 482 aa3.19□□□□□ -1.9
RNU6-1140P-201ENST00000410517 NRDE2Q9H7Z3 1164 aa3.19□□□□□ -1.9
RNU6-1140P-201ENST00000410517 IL23AQ9NPF7 189 aa3.19□□□□□ -1.9
RNU6-1140P-201ENST00000410517 SERHLQ9NQF3 203 aa3.19□□□□□ -1.9
RNU6-1140P-201ENST00000410517 PNPOQ9NVS9 261 aa3.19□□□□□ -1.9
RNU6-1140P-201ENST00000410517 PIH1D1Q9NWS0 290 aaKnown RBP3.19□□□□□ -1.9
RNU6-1140P-201ENST00000410517 GPRC5BQ9NZH0 403 aa3.19□□□□□ -1.9
RNU6-1140P-201ENST00000410517 CFAP97Q9P2B7 532 aa3.19□□□□□ -1.9
RNU6-1140P-201ENST00000410517 PACSIN3Q9UKS6 424 aa3.19□□□□□ -1.9
RNU6-1140P-201ENST00000410517 ZDHHC8Q9ULC8 765 aa3.19□□□□□ -1.9
RNU6-1140P-201ENST00000410517 IPPQ9Y573 584 aa3.19□□□□□ -1.9
RNU6-1140P-201ENST00000410517 MED14O60244 1454 aa3.19□□□□□ -1.9
RNU6-1140P-201ENST00000410517 LRRC9Q6ZRR7 1453 aa3.19□□□□□ -1.9
RNU6-1140P-201ENST00000410517 RTEL1-TNFRSF6BF6WH68 1400 aa3.19□□□□□ -1.9
RNU6-1140P-201ENST00000410517 TROQ12816 1431 aaPredicted RBP3.19□□□□□ -1.9
RNU6-1140P-201ENST00000410517 MYBBP1AQ9BQG0 1328 aaKnown RBP3.19□□□□□ -1.9
RNU6-1140P-201ENST00000410517 CTTNBP2Q8WZ74 1663 aa3.18□□□□□ -1.9
RNU6-1140P-201ENST00000410517 SAMD9Q5K651 1589 aa3.18□□□□□ -1.9
RNU6-1140P-201ENST00000410517 CCDC18Q5T9S5 1454 aa3.18□□□□□ -1.9
RNU6-1140P-201ENST00000410517 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.18□□□□□ -1.9
RNU6-1140P-201ENST00000410517 ISM1B1AKI9 464 aa3.18□□□□□ -1.9
RNU6-1140P-201ENST00000410517 H3BUI4 141 aa3.18□□□□□ -1.9
RNU6-1140P-201ENST00000410517 TPP1O14773 563 aa3.18□□□□□ -1.9
RNU6-1140P-201ENST00000410517 CHEK2O96017 543 aa3.18□□□□□ -1.9
RNU6-1140P-201ENST00000410517 SPATA31D3P0C874 917 aa3.18□□□□□ -1.9
RNU6-1140P-201ENST00000410517 RHCEP18577 417 aa3.18□□□□□ -1.9
RNU6-1140P-201ENST00000410517 DDCP20711 480 aa3.18□□□□□ -1.9
RNU6-1140P-201ENST00000410517 SREBF1P36956 1147 aa3.18□□□□□ -1.9
RNU6-1140P-201ENST00000410517 KCNJ5P48544 419 aa3.18□□□□□ -1.9
RNU6-1140P-201ENST00000410517 ADCY7P51828 1080 aa3.18□□□□□ -1.9
RNU6-1140P-201ENST00000410517 HK3P52790 923 aa3.18□□□□□ -1.9
RNU6-1140P-201ENST00000410517 AK2P54819 239 aa3.18□□□□□ -1.9
RNU6-1140P-201ENST00000410517 CTXN1P60606 82 aa3.18□□□□□ -1.9
RNU6-1140P-201ENST00000410517 SLC25A3Q00325 362 aa3.18□□□□□ -1.9
RNU6-1140P-201ENST00000410517 RHDQ02161 417 aa3.18□□□□□ -1.9
RNU6-1140P-201ENST00000410517 GRM7Q14831 915 aa3.18□□□□□ -1.9
RNU6-1140P-201ENST00000410517 ZRSR2Q15696 482 aaKnown RBP3.18□□□□□ -1.9
RNU6-1140P-201ENST00000410517 PABPC1LQ4VXU2 614 aaKnown RBP3.18□□□□□ -1.9
RNU6-1140P-201ENST00000410517 METTL24Q5JXM2 366 aa3.18□□□□□ -1.9
RNU6-1140P-201ENST00000410517 LCE1EQ5T753 118 aa3.18□□□□□ -1.9
RNU6-1140P-201ENST00000410517 RNF220Q5VTB9 566 aa3.18□□□□□ -1.9
RNU6-1140P-201ENST00000410517 B3GNT9Q6UX72 402 aa3.18□□□□□ -1.9
RNU6-1140P-201ENST00000410517 SPATA31D4Q6ZUB0 917 aa3.18□□□□□ -1.9
RNU6-1140P-201ENST00000410517 MAEAQ7L5Y9 396 aa3.18□□□□□ -1.9
RNU6-1140P-201ENST00000410517 ZNF572Q7Z3I7 529 aaPredicted RBP3.18□□□□□ -1.9
RNU6-1140P-201ENST00000410517 ADGRE4PQ86SQ3 457 aa3.18□□□□□ -1.9
RNU6-1140P-201ENST00000410517 MYLK4Q86YV6 388 aaPredicted RBP3.18□□□□□ -1.9
RNU6-1140P-201ENST00000410517 LYSMD2Q8IV50 215 aa3.18□□□□□ -1.9
RNU6-1140P-201ENST00000410517 PIK3C3Q8NEB9 887 aa3.18□□□□□ -1.9
RNU6-1140P-201ENST00000410517 OR14K1Q8NGZ2 314 aa3.18□□□□□ -1.9
RNU6-1140P-201ENST00000410517 NSUN6Q8TEA1 469 aaKnown RBP3.18□□□□□ -1.9
RNU6-1140P-201ENST00000410517 LRTOMTQ8WZ04 291 aa3.18□□□□□ -1.9
RNU6-1140P-201ENST00000410517 TRIM63Q969Q1 353 aa3.18□□□□□ -1.9
RNU6-1140P-201ENST00000410517 SLC35A4Q96G79 324 aa3.18□□□□□ -1.9
RNU6-1140P-201ENST00000410517 CGRRF1Q99675 332 aa3.18□□□□□ -1.9
RNU6-1140P-201ENST00000410517 MYD88Q99836 296 aa3.18□□□□□ -1.9
RNU6-1140P-201ENST00000410517 ELAC2Q9BQ52 826 aaKnown RBP3.18□□□□□ -1.9
RNU6-1140P-201ENST00000410517 SOX7Q9BT81 388 aa3.18□□□□□ -1.9
RNU6-1140P-201ENST00000410517 EIF2AQ9BY44 585 aaKnown RBP3.18□□□□□ -1.9
RNU6-1140P-201ENST00000410517 KIAA1683Q9H0B3 1180 aa3.18□□□□□ -1.9
RNU6-1140P-201ENST00000410517 ZCWPW1Q9H0M4 648 aa3.18□□□□□ -1.9
RNU6-1140P-201ENST00000410517 C11orf54Q9H0W9 315 aaPredicted RBP3.18□□□□□ -1.9
RNU6-1140P-201ENST00000410517 ARFGAP3Q9NP61 516 aa3.18□□□□□ -1.9
RNU6-1140P-201ENST00000410517 PNPLA8Q9NP80 782 aa3.18□□□□□ -1.9
RNU6-1140P-201ENST00000410517 ZSCAN32Q9NX65 697 aa3.18□□□□□ -1.9
RNU6-1140P-201ENST00000410517 PLA2G3Q9NZ20 509 aa3.18□□□□□ -1.9
RNU6-1140P-201ENST00000410517 TRPS1Q9UHF7 1281 aa3.18□□□□□ -1.9
RNU6-1140P-201ENST00000410517 MAGEL2Q9UJ55 1249 aa3.18□□□□□ -1.9
RNU6-1140P-201ENST00000410517 OGDHLQ9ULD0 1010 aa3.18□□□□□ -1.9
RNU6-1140P-201ENST00000410517 TPCN1Q9ULQ1 816 aa3.18□□□□□ -1.9
RNU6-1140P-201ENST00000410517 PADI4Q9UM07 663 aa3.18□□□□□ -1.9
RNU6-1140P-201ENST00000410517 ARHGAP5Q13017 1502 aa3.18□□□□□ -1.9
RNU6-1140P-201ENST00000410517 NCOA3Q9Y6Q9 1424 aa3.18□□□□□ -1.9
RNU6-1140P-201ENST00000410517 STRCQ7RTU9 1775 aa3.17□□□□□ -1.9
RNU6-1140P-201ENST00000410517 MROH2AA6NES4 1674 aa3.17□□□□□ -1.9
RNU6-1140P-201ENST00000410517 CDK12Q9NYV4 1490 aaPredicted RBP3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms