RNA–Protein interactions for RNA: ENST00000409946.5

LRPPRC-203, Transcript of leucine rich pentatricopeptide repeat containing, humanhuman

TSL 1 (best) BASIC

Gene LRPPRC, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRPPRC-203ENST00000409946 ZBTB6Q15916 424 aa18.74■□□□□ 0.59
LRPPRC-203ENST00000409946 LHX8Q68G74 356 aa18.74■□□□□ 0.59
LRPPRC-203ENST00000409946 RHOT2Q8IXI1 618 aa18.74■□□□□ 0.59
LRPPRC-203ENST00000409946 NOA1Q8NC60 698 aaKnown RBP18.74■□□□□ 0.59
LRPPRC-203ENST00000409946 TFAP2BQ92481 460 aa18.74■□□□□ 0.59
LRPPRC-203ENST00000409946 MS4A14Q96JA4 679 aa18.74■□□□□ 0.59
LRPPRC-203ENST00000409946 TWNKQ96RR1 684 aa18.74■□□□□ 0.59
LRPPRC-203ENST00000409946 AGO3Q9H9G7 860 aaKnown RBP18.74■□□□□ 0.59
LRPPRC-203ENST00000409946 STXBP5LQ9Y2K9 1186 aa18.74■□□□□ 0.59
LRPPRC-203ENST00000409946 TMEM110-MUSTN1A8MSY1 372 aa18.73■□□□□ 0.59
LRPPRC-203ENST00000409946 KIF4AO95239 1232 aa18.73■□□□□ 0.59
LRPPRC-203ENST00000409946 CYP1A2P05177 515 aa18.73■□□□□ 0.59
LRPPRC-203ENST00000409946 PEX26Q7Z412 305 aa18.73■□□□□ 0.59
LRPPRC-203ENST00000409946 NT5DC3Q86UY8 548 aa18.73■□□□□ 0.59
LRPPRC-203ENST00000409946 MCOLN2Q8IZK6 566 aa18.73■□□□□ 0.59
LRPPRC-203ENST00000409946 SLAIN1Q8ND83 568 aa18.73■□□□□ 0.59
LRPPRC-203ENST00000409946 SH3TC2Q8TF17 1288 aa18.73■□□□□ 0.59
LRPPRC-203ENST00000409946 BTBD6Q96KE9 485 aa18.73■□□□□ 0.59
LRPPRC-203ENST00000409946 NUP85Q9BW27 656 aa18.73■□□□□ 0.59
LRPPRC-203ENST00000409946 PARD6BQ9BYG5 372 aa18.73■□□□□ 0.59
LRPPRC-203ENST00000409946 VRTNQ9H8Y1 702 aa18.73■□□□□ 0.59
LRPPRC-203ENST00000409946 HMX1Q9NP08 348 aaPredicted RBP18.73■□□□□ 0.59
LRPPRC-203ENST00000409946 CNOT8Q9UFF9 292 aaKnown RBP18.73■□□□□ 0.59
LRPPRC-203ENST00000409946 GTF3C4Q9UKN8 822 aa18.73■□□□□ 0.59
LRPPRC-203ENST00000409946 DERAQ9Y315 318 aa18.73■□□□□ 0.59
LRPPRC-203ENST00000409946 TRIM17Q9Y577 477 aa18.73■□□□□ 0.59
LRPPRC-203ENST00000409946 MEIS3P2A8K0S8 358 aa18.72■□□□□ 0.59
LRPPRC-203ENST00000409946 ZSCAN20P17040 1043 aaPredicted RBP18.72■□□□□ 0.59
LRPPRC-203ENST00000409946 CENPCQ03188 943 aa18.72■□□□□ 0.59
LRPPRC-203ENST00000409946 GABPB1Q06547 395 aaPredicted RBP18.72■□□□□ 0.59
LRPPRC-203ENST00000409946 BRD3Q15059 726 aa18.72■□□□□ 0.59
LRPPRC-203ENST00000409946 RPS6KA1Q15418 735 aa18.72■□□□□ 0.59
LRPPRC-203ENST00000409946 CPNE8Q86YQ8 564 aa18.72■□□□□ 0.59
LRPPRC-203ENST00000409946 WHAMMQ8TF30 809 aa18.72■□□□□ 0.59
LRPPRC-203ENST00000409946 ELOVL4Q9GZR5 314 aa18.72■□□□□ 0.59
LRPPRC-203ENST00000409946 GOLGA2P5Q9HBQ8 144 aa18.72■□□□□ 0.59
LRPPRC-203ENST00000409946 SMIM28A0A1B0GU29 152 aa18.72■□□□□ 0.59
LRPPRC-203ENST00000409946 TUBBP07437 444 aa18.72■□□□□ 0.59
LRPPRC-203ENST00000409946 GHRP10912 638 aa18.72■□□□□ 0.59
LRPPRC-203ENST00000409946 NSFP46459 744 aaKnown RBP18.72■□□□□ 0.59
LRPPRC-203ENST00000409946 RAD23BP54727 409 aa18.72■□□□□ 0.59
LRPPRC-203ENST00000409946 YWHAEP62258 255 aaKnown RBP18.72■□□□□ 0.59
LRPPRC-203ENST00000409946 CKAP4Q07065 602 aaKnown RBP18.72■□□□□ 0.59
LRPPRC-203ENST00000409946 C2orf54Q08AI8 447 aa18.72■□□□□ 0.59
LRPPRC-203ENST00000409946 MON1BQ7L1V2 547 aa18.72■□□□□ 0.59
LRPPRC-203ENST00000409946 RPAINQ86UA6 219 aa18.72■□□□□ 0.59
LRPPRC-203ENST00000409946 BEST2Q8NFU1 509 aa18.72■□□□□ 0.59
LRPPRC-203ENST00000409946 ZNF564Q8TBZ8 553 aaPredicted RBP18.72■□□□□ 0.59
LRPPRC-203ENST00000409946 C11orf70Q9BRQ4 267 aa18.72■□□□□ 0.59
LRPPRC-203ENST00000409946 ABCB6Q9NP58 842 aa18.72■□□□□ 0.59
LRPPRC-203ENST00000409946 NOD1Q9Y239 953 aa18.72■□□□□ 0.59
LRPPRC-203ENST00000409946 CCDC151A5D8V7 595 aa18.71■□□□□ 0.59
LRPPRC-203ENST00000409946 CD19P15391 556 aa18.71■□□□□ 0.59
LRPPRC-203ENST00000409946 RRM1P23921 792 aa18.71■□□□□ 0.59
LRPPRC-203ENST00000409946 CD52P31358 61 aa18.71■□□□□ 0.59
LRPPRC-203ENST00000409946 HADHBP55084 474 aaKnown RBP18.71■□□□□ 0.59
LRPPRC-203ENST00000409946 TNNC1P63316 161 aa18.71■□□□□ 0.59
LRPPRC-203ENST00000409946 SOX4Q06945 474 aaPredicted RBP18.71■□□□□ 0.59
LRPPRC-203ENST00000409946 TRIM71Q2Q1W2 868 aaKnown RBP18.71■□□□□ 0.59
LRPPRC-203ENST00000409946 CC2D1AQ6P1N0 951 aaPredicted RBP18.71■□□□□ 0.59
LRPPRC-203ENST00000409946 TRIM72Q6ZMU5 477 aa18.71■□□□□ 0.59
LRPPRC-203ENST00000409946 SYCE1Q8N0S2 351 aa18.71■□□□□ 0.59
LRPPRC-203ENST00000409946 MSANTD4Q8NCY6 345 aa18.71■□□□□ 0.59
LRPPRC-203ENST00000409946 RNF216Q9NWF9 866 aaPredicted RBP18.71■□□□□ 0.59
LRPPRC-203ENST00000409946 KCNK3O14649 394 aa18.7■□□□□ 0.58
LRPPRC-203ENST00000409946 CILPO75339 1184 aa18.7■□□□□ 0.58
LRPPRC-203ENST00000409946 CABYRO75952 493 aa18.7■□□□□ 0.58
LRPPRC-203ENST00000409946 MYCP01106 439 aaPredicted RBP18.7■□□□□ 0.58
LRPPRC-203ENST00000409946 MESDQ14696 234 aa18.7■□□□□ 0.58
LRPPRC-203ENST00000409946 TCEAL1Q15170 157 aa18.7■□□□□ 0.58
LRPPRC-203ENST00000409946 C9orf57Q5W0N0 161 aa18.7■□□□□ 0.58
LRPPRC-203ENST00000409946 MMS22LQ6ZRQ5 1243 aa18.7■□□□□ 0.58
LRPPRC-203ENST00000409946 SLC4A11Q8NBS3 891 aa18.7■□□□□ 0.58
LRPPRC-203ENST00000409946 C1orf131Q8NDD1 294 aaKnown RBP18.7■□□□□ 0.58
LRPPRC-203ENST00000409946 ZFP42Q96MM3 310 aa18.7■□□□□ 0.58
LRPPRC-203ENST00000409946 GLT1D1Q96MS3 346 aa18.7■□□□□ 0.58
LRPPRC-203ENST00000409946 ARFGAP3Q9NP61 516 aa18.7■□□□□ 0.58
LRPPRC-203ENST00000409946 SAGE1Q9NXZ1 904 aa18.7■□□□□ 0.58
LRPPRC-203ENST00000409946 AMFRQ9UKV5 643 aa18.7■□□□□ 0.58
LRPPRC-203ENST00000409946 UBQLN1Q9UMX0 589 aaKnown RBP18.7■□□□□ 0.58
LRPPRC-203ENST00000409946 A0A1W2PQ45 241 aaPredicted RBP18.7■□□□□ 0.58
LRPPRC-203ENST00000409946 A0A1W2PQY0 241 aa18.7■□□□□ 0.58
LRPPRC-203ENST00000409946 MTA2O94776 668 aa18.7■□□□□ 0.58
LRPPRC-203ENST00000409946 STAU1O95793 577 aaKnown RBP18.7■□□□□ 0.58
LRPPRC-203ENST00000409946 P4HA1P13674 534 aa18.7■□□□□ 0.58
LRPPRC-203ENST00000409946 RNASE9P60153 205 aaKnown RBP18.7■□□□□ 0.58
LRPPRC-203ENST00000409946 PTK7Q13308 1070 aa18.7■□□□□ 0.58
LRPPRC-203ENST00000409946 XKR4Q5GH76 650 aa18.7■□□□□ 0.58
LRPPRC-203ENST00000409946 FBXO47Q5MNV8 452 aa18.7■□□□□ 0.58
LRPPRC-203ENST00000409946 CCDC181Q5TID7 509 aa18.7■□□□□ 0.58
LRPPRC-203ENST00000409946 HNRNPLLQ8WVV9 542 aaKnown RBP18.7■□□□□ 0.58
LRPPRC-203ENST00000409946 LPPQ93052 612 aa18.7■□□□□ 0.58
LRPPRC-203ENST00000409946 TRIM7Q9C029 511 aa18.7■□□□□ 0.58
LRPPRC-203ENST00000409946 TRPV6Q9H1D0 765 aa18.7■□□□□ 0.58
LRPPRC-203ENST00000409946 ERVK-5Q9HDB9 667 aa18.7■□□□□ 0.58
LRPPRC-203ENST00000409946 FAM105AQ9NUU6 356 aa18.7■□□□□ 0.58
LRPPRC-203ENST00000409946 RAB21Q9UL25 225 aa18.7■□□□□ 0.58
LRPPRC-203ENST00000409946 SNX9Q9Y5X1 595 aa18.7■□□□□ 0.58
LRPPRC-203ENST00000409946 CEP350Q5VT06 3117 aa18.69■□□□□ 0.58
LRPPRC-203ENST00000409946 MOXD2PA6NHM9 499 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms