RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 TGFB1I1O43294 461 aa19.13■□□□□ 0.65
LSM5-204ENST00000409909 PFKFB1P16118 471 aa19.13■□□□□ 0.65
LSM5-204ENST00000409909 PTPN2P17706 415 aa19.13■□□□□ 0.65
LSM5-204ENST00000409909 CMA1P23946 247 aa19.13■□□□□ 0.65
LSM5-204ENST00000409909 TAF6P49848 677 aa19.13■□□□□ 0.65
LSM5-204ENST00000409909 TFAMQ00059 246 aaKnown RBP19.13■□□□□ 0.65
LSM5-204ENST00000409909 GPR17Q13304 367 aa19.13■□□□□ 0.65
LSM5-204ENST00000409909 PARM1Q6UWI2 310 aa19.13■□□□□ 0.65
LSM5-204ENST00000409909 NPAS3Q8IXF0 933 aa19.13■□□□□ 0.65
LSM5-204ENST00000409909 GPD1LQ8N335 351 aa19.13■□□□□ 0.65
LSM5-204ENST00000409909 C1orf127Q8N9H9 656 aa19.13■□□□□ 0.65
LSM5-204ENST00000409909 CXorf38Q8TB03 319 aa19.13■□□□□ 0.65
LSM5-204ENST00000409909 SCFD1Q8WVM8 642 aa19.13■□□□□ 0.65
LSM5-204ENST00000409909 ING5Q8WYH8 240 aa19.13■□□□□ 0.65
LSM5-204ENST00000409909 FGF14Q92915 247 aa19.13■□□□□ 0.65
LSM5-204ENST00000409909 FAM122AQ96E09 287 aa19.13■□□□□ 0.65
LSM5-204ENST00000409909 PGLYRP2Q96PD5 576 aa19.13■□□□□ 0.65
LSM5-204ENST00000409909 RTP3Q9BQQ7 232 aa19.13■□□□□ 0.65
LSM5-204ENST00000409909 AVENQ9NQS1 362 aaPredicted RBP19.13■□□□□ 0.65
LSM5-204ENST00000409909 CEP72Q9P209 647 aa19.13■□□□□ 0.65
LSM5-204ENST00000409909 NUMBLQ9Y6R0 609 aa19.13■□□□□ 0.65
LSM5-204ENST00000409909 TCHHQ07283 1943 aa19.13■□□□□ 0.65
LSM5-204ENST00000409909 PVALEFA0A1B0GWK0 134 aa19.12■□□□□ 0.65
LSM5-204ENST00000409909 NRG2O14511 850 aaPredicted RBP19.12■□□□□ 0.65
LSM5-204ENST00000409909 CYB561D2O14569 222 aa19.12■□□□□ 0.65
LSM5-204ENST00000409909 AVPR2P30518 371 aa19.12■□□□□ 0.65
LSM5-204ENST00000409909 KRT85P78386 507 aa19.12■□□□□ 0.65
LSM5-204ENST00000409909 TWF1Q12792 350 aa19.12■□□□□ 0.65
LSM5-204ENST00000409909 MYBPC2Q14324 1141 aa19.12■□□□□ 0.65
LSM5-204ENST00000409909 CBWD2Q8IUF1 395 aa19.12■□□□□ 0.65
LSM5-204ENST00000409909 CEP57L1Q8IYX8 460 aa19.12■□□□□ 0.65
LSM5-204ENST00000409909 OR10T2Q8NGX3 314 aa19.12■□□□□ 0.65
LSM5-204ENST00000409909 PAGE5Q96GU1 130 aa19.12■□□□□ 0.65
LSM5-204ENST00000409909 CORO1BQ9BR76 489 aa19.12■□□□□ 0.65
LSM5-204ENST00000409909 PYM1Q9BRP8 204 aaKnown RBP19.12■□□□□ 0.65
LSM5-204ENST00000409909 KCNH6Q9H252 994 aa19.12■□□□□ 0.65
LSM5-204ENST00000409909 SLC39A2Q9NP94 309 aa19.12■□□□□ 0.65
LSM5-204ENST00000409909 HSPBP1Q9NZL4 362 aa19.12■□□□□ 0.65
LSM5-204ENST00000409909 HPSEQ9Y251 543 aa19.12■□□□□ 0.65
LSM5-204ENST00000409909 MRPS23Q9Y3D9 190 aaKnown RBP19.12■□□□□ 0.65
LSM5-204ENST00000409909 PTPRJQ12913 1337 aa19.11■□□□□ 0.65
LSM5-204ENST00000409909 KPNA7A9QM74 516 aa19.11■□□□□ 0.65
LSM5-204ENST00000409909 KIAA0391O15091 583 aaKnown RBP19.11■□□□□ 0.65
LSM5-204ENST00000409909 KLRC4O43908 158 aa19.11■□□□□ 0.65
LSM5-204ENST00000409909 ITGB3P05106 788 aa19.11■□□□□ 0.65
LSM5-204ENST00000409909 POLR2BP30876 1174 aaKnown RBP19.11■□□□□ 0.65
LSM5-204ENST00000409909 CCR2P41597 374 aa19.11■□□□□ 0.65
LSM5-204ENST00000409909 DUSP4Q13115 394 aa19.11■□□□□ 0.65
LSM5-204ENST00000409909 PRSS36Q5K4E3 855 aa19.11■□□□□ 0.65
LSM5-204ENST00000409909 WSCD1Q658N2 575 aa19.11■□□□□ 0.65
LSM5-204ENST00000409909 CENPPQ6IPU0 288 aa19.11■□□□□ 0.65
LSM5-204ENST00000409909 NELFCDQ8IXH7 590 aa19.11■□□□□ 0.65
LSM5-204ENST00000409909 HS6ST3Q8IZP7 471 aa19.11■□□□□ 0.65
LSM5-204ENST00000409909 ATAD1Q8NBU5 361 aa19.11■□□□□ 0.65
LSM5-204ENST00000409909 CACTINQ8WUQ7 758 aaKnown RBP19.11■□□□□ 0.65
LSM5-204ENST00000409909 TCEAL4Q96EI5 215 aa19.11■□□□□ 0.65
LSM5-204ENST00000409909 AGPAT3Q9NRZ7 376 aa19.11■□□□□ 0.65
LSM5-204ENST00000409909 AGAP1Q9UPQ3 857 aa19.11■□□□□ 0.65
LSM5-204ENST00000409909 SLC27A5Q9Y2P5 690 aa19.11■□□□□ 0.65
LSM5-204ENST00000409909 ZNF233A6NK53 670 aa19.1■□□□□ 0.65
LSM5-204ENST00000409909 CFHP08603 1231 aa19.1■□□□□ 0.65
LSM5-204ENST00000409909 SRFP11831 508 aa19.1■□□□□ 0.65
LSM5-204ENST00000409909 NPR3P17342 541 aa19.1■□□□□ 0.65
LSM5-204ENST00000409909 CEBPBP17676 345 aa19.1■□□□□ 0.65
LSM5-204ENST00000409909 CDR1P51861 262 aa19.1■□□□□ 0.65
LSM5-204ENST00000409909 SV2CQ496J9 727 aa19.1■□□□□ 0.65
LSM5-204ENST00000409909 LMBRD2Q68DH5 695 aaPredicted RBP19.1■□□□□ 0.65
LSM5-204ENST00000409909 CSGALNACT2Q8N6G5 542 aa19.1■□□□□ 0.65
LSM5-204ENST00000409909 PRSS33Q8NF86 280 aa19.1■□□□□ 0.65
LSM5-204ENST00000409909 MCRS1Q96EZ8 462 aa19.1■□□□□ 0.65
LSM5-204ENST00000409909 ZCWPW1Q9H0M4 648 aa19.1■□□□□ 0.65
LSM5-204ENST00000409909 SIX4Q9UIU6 781 aa19.1■□□□□ 0.65
LSM5-204ENST00000409909 FBXL21Q9UKT6 434 aa19.1■□□□□ 0.65
LSM5-204ENST00000409909 DSEQ9UL01 958 aa19.1■□□□□ 0.65
LSM5-204ENST00000409909 YIPF1Q9Y548 306 aa19.1■□□□□ 0.65
LSM5-204ENST00000409909 UBE4BO95155 1302 aa19.09■□□□□ 0.65
LSM5-204ENST00000409909 FAM237AA0A1B0GTK4 181 aa19.09■□□□□ 0.65
LSM5-204ENST00000409909 MTMR11A4FU01 709 aa19.09■□□□□ 0.65
LSM5-204ENST00000409909 KRBA1A5PL33 1030 aa19.09■□□□□ 0.65
LSM5-204ENST00000409909 CLIC2O15247 247 aa19.09■□□□□ 0.65
LSM5-204ENST00000409909 PNPLA4P41247 253 aa19.09■□□□□ 0.65
LSM5-204ENST00000409909 BMT2Q1RMZ1 405 aa19.09■□□□□ 0.65
LSM5-204ENST00000409909 LRRTM3Q86VH5 581 aa19.09■□□□□ 0.65
LSM5-204ENST00000409909 METTL23Q86XA0 190 aa19.09■□□□□ 0.65
LSM5-204ENST00000409909 SIX5Q8N196 739 aa19.09■□□□□ 0.65
LSM5-204ENST00000409909 TTC9BQ8N6N2 239 aa19.09■□□□□ 0.65
LSM5-204ENST00000409909 TMEM105Q8N8V8 129 aa19.09■□□□□ 0.65
LSM5-204ENST00000409909 OR5B17Q8NGF7 314 aa19.09■□□□□ 0.65
LSM5-204ENST00000409909 ZNF512Q96ME7 567 aaPredicted RBP19.09■□□□□ 0.65
LSM5-204ENST00000409909 ZNF560Q96MR9 790 aa19.09■□□□□ 0.65
LSM5-204ENST00000409909 MTMR12Q9C0I1 747 aa19.09■□□□□ 0.65
LSM5-204ENST00000409909 INTS13Q9NVM9 706 aa19.09■□□□□ 0.65
LSM5-204ENST00000409909 WNT16Q9UBV4 365 aa19.09■□□□□ 0.65
LSM5-204ENST00000409909 ITGA11Q9UKX5 1188 aa19.09■□□□□ 0.65
LSM5-204ENST00000409909 CACNA1HO95180 2353 aa19.08■□□□□ 0.65
LSM5-204ENST00000409909 MOSPD3O75425 235 aa19.08■□□□□ 0.64
LSM5-204ENST00000409909 SOAT2O75908 522 aa19.08■□□□□ 0.64
LSM5-204ENST00000409909 CYP2J2P51589 502 aa19.08■□□□□ 0.64
LSM5-204ENST00000409909 NDUFA8P51970 172 aa19.08■□□□□ 0.64
LSM5-204ENST00000409909 EPHA5P54756 1037 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms