RNA–Protein interactions for RNA: ENST00000409881.1

MINDY4-202, Transcript of MINDY lysine 48 deubiquitinase 4, humanhuman

TSL 2

Gene MINDY4, Length 2,488 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY4-202ENST00000409881 TOM1L1O75674 476 aa15.26■□□□□ 0.03
MINDY4-202ENST00000409881 SELPP16109 830 aa15.26■□□□□ 0.03
MINDY4-202ENST00000409881 ECHS1P30084 290 aa15.26■□□□□ 0.03
MINDY4-202ENST00000409881 NFX1Q12986 1120 aaKnown RBP15.26■□□□□ 0.03
MINDY4-202ENST00000409881 XRCC4Q13426 336 aa15.26■□□□□ 0.03
MINDY4-202ENST00000409881 FBXO47Q5MNV8 452 aa15.26■□□□□ 0.03
MINDY4-202ENST00000409881 LRIG3Q6UXM1 1119 aa15.26■□□□□ 0.03
MINDY4-202ENST00000409881 TSHZ1Q6ZSZ6 1077 aa15.26■□□□□ 0.03
MINDY4-202ENST00000409881 CACNA2D4Q7Z3S7 1137 aa15.26■□□□□ 0.03
MINDY4-202ENST00000409881 PPP1R12CQ9BZL4 782 aa15.26■□□□□ 0.03
MINDY4-202ENST00000409881 HIPK3Q9H422 1215 aa15.26■□□□□ 0.03
MINDY4-202ENST00000409881 NLRC4Q9NPP4 1024 aa15.26■□□□□ 0.03
MINDY4-202ENST00000409881 HSPBP1Q9NZL4 362 aa15.26■□□□□ 0.03
MINDY4-202ENST00000409881 NOVA2Q9UNW9 492 aaKnown RBP15.26■□□□□ 0.03
MINDY4-202ENST00000409881 CLDN3O15551 220 aa15.25■□□□□ 0.03
MINDY4-202ENST00000409881 EXOC3O60645 756 aa15.25■□□□□ 0.03
MINDY4-202ENST00000409881 FGFR1OPO95684 399 aaKnown RBP15.25■□□□□ 0.03
MINDY4-202ENST00000409881 SLC8A1P32418 973 aa15.25■□□□□ 0.03
MINDY4-202ENST00000409881 PPP2R2AP63151 447 aa15.25■□□□□ 0.03
MINDY4-202ENST00000409881 LPIN1Q14693 890 aa15.25■□□□□ 0.03
MINDY4-202ENST00000409881 ZNF568Q3ZCX4 644 aa15.25■□□□□ 0.03
MINDY4-202ENST00000409881 EEF1DP3Q658K8 133 aa15.25■□□□□ 0.03
MINDY4-202ENST00000409881 TRAF7Q6Q0C0 670 aa15.25■□□□□ 0.03
MINDY4-202ENST00000409881 CPLX4Q7Z7G2 160 aa15.25■□□□□ 0.03
MINDY4-202ENST00000409881 SAAL1Q96ER3 474 aa15.25■□□□□ 0.03
MINDY4-202ENST00000409881 ABHD8Q96I13 439 aa15.25■□□□□ 0.03
MINDY4-202ENST00000409881 MSTO1Q9BUK6 570 aa15.25■□□□□ 0.03
MINDY4-202ENST00000409881 TRIM6Q9C030 488 aaPredicted RBP15.25■□□□□ 0.03
MINDY4-202ENST00000409881 BAIAP2L1Q9UHR4 511 aa15.25■□□□□ 0.03
MINDY4-202ENST00000409881 PIN4Q9Y237 131 aaKnown RBP15.25■□□□□ 0.03
MINDY4-202ENST00000409881 UMODL1Q5DID0 1318 aa15.25■□□□□ 0.03
MINDY4-202ENST00000409881 GOLGA8IPA6NC78 632 aa15.25■□□□□ 0.03
MINDY4-202ENST00000409881 GOLGA8JA6NMD2 632 aa15.25■□□□□ 0.03
MINDY4-202ENST00000409881 RTN2O75298 545 aa15.25■□□□□ 0.03
MINDY4-202ENST00000409881 CLTBP09497 229 aa15.25■□□□□ 0.03
MINDY4-202ENST00000409881 CASP4P49662 377 aa15.25■□□□□ 0.03
MINDY4-202ENST00000409881 PCBP1Q15365 356 aaKnown RBP eCLIP15.25■□□□□ 0.03
MINDY4-202ENST00000409881 LACTB2Q53H82 288 aaPredicted RBP15.25■□□□□ 0.03
MINDY4-202ENST00000409881 HGSNATQ68CP4 663 aa15.25■□□□□ 0.03
MINDY4-202ENST00000409881 SLFN12LQ6IEE8 588 aa15.25■□□□□ 0.03
MINDY4-202ENST00000409881 PDXDC1Q6P996 788 aa15.25■□□□□ 0.03
MINDY4-202ENST00000409881 MPZL3Q6UWV2 235 aa15.25■□□□□ 0.03
MINDY4-202ENST00000409881 UBE2Q1Q7Z7E8 422 aa15.25■□□□□ 0.03
MINDY4-202ENST00000409881 ZSWIM2Q8NEG5 633 aa15.25■□□□□ 0.03
MINDY4-202ENST00000409881 UBLCP1Q8WVY7 318 aaPredicted RBP15.25■□□□□ 0.03
MINDY4-202ENST00000409881 CCT6BQ92526 530 aa15.25■□□□□ 0.03
MINDY4-202ENST00000409881 CEP63Q96MT8 703 aa15.25■□□□□ 0.03
MINDY4-202ENST00000409881 HAPLN2Q9GZV7 340 aa15.25■□□□□ 0.03
MINDY4-202ENST00000409881 ISCUQ9H1K1 167 aa15.25■□□□□ 0.03
MINDY4-202ENST00000409881 NEUROG2Q9H2A3 272 aa15.25■□□□□ 0.03
MINDY4-202ENST00000409881 PDZD7Q9H5P4 517 aa15.25■□□□□ 0.03
MINDY4-202ENST00000409881 AGO3Q9H9G7 860 aaKnown RBP15.25■□□□□ 0.03
MINDY4-202ENST00000409881 TMEM39AQ9NV64 488 aa15.25■□□□□ 0.03
MINDY4-202ENST00000409881 ST3GAL5Q9UNP4 418 aa15.25■□□□□ 0.03
MINDY4-202ENST00000409881 TNFSF13BQ9Y275 285 aa15.25■□□□□ 0.03
MINDY4-202ENST00000409881 GRID2IPA4D2P6 1211 aa15.24■□□□□ 0.03
MINDY4-202ENST00000409881 C5orf60A6NFR6 353 aa15.24■□□□□ 0.03
MINDY4-202ENST00000409881 TULP1O00294 542 aaPredicted RBP15.24■□□□□ 0.03
MINDY4-202ENST00000409881 MGRN1O60291 552 aa15.24■□□□□ 0.03
MINDY4-202ENST00000409881 GARTP22102 1010 aa15.24■□□□□ 0.03
MINDY4-202ENST00000409881 CD52P31358 61 aa15.24■□□□□ 0.03
MINDY4-202ENST00000409881 FLT3P36888 993 aa15.24■□□□□ 0.03
MINDY4-202ENST00000409881 TNNC1P63316 161 aa15.24■□□□□ 0.03
MINDY4-202ENST00000409881 ELF3P78545 371 aaPredicted RBP15.24■□□□□ 0.03
MINDY4-202ENST00000409881 NFIL3Q16649 462 aa15.24■□□□□ 0.03
MINDY4-202ENST00000409881 GKAP1Q5VSY0 366 aaPredicted RBP15.24■□□□□ 0.03
MINDY4-202ENST00000409881 HIBCHQ6NVY1 386 aaPredicted RBP15.24■□□□□ 0.03
MINDY4-202ENST00000409881 C12orf56Q8IXR9 622 aa15.24■□□□□ 0.03
MINDY4-202ENST00000409881 ZC3H3Q8IXZ2 948 aaKnown RBP15.24■□□□□ 0.03
MINDY4-202ENST00000409881 USP38Q8NB14 1042 aa15.24■□□□□ 0.03
MINDY4-202ENST00000409881 XXYLT1Q8NBI6 393 aa15.24■□□□□ 0.03
MINDY4-202ENST00000409881 C3orf20Q8ND61 904 aa15.24■□□□□ 0.03
MINDY4-202ENST00000409881 TATDN2Q93075 761 aa15.24■□□□□ 0.03
MINDY4-202ENST00000409881 IQCDQ96DY2 449 aa15.24■□□□□ 0.03
MINDY4-202ENST00000409881 NOD2Q9HC29 1040 aa15.24■□□□□ 0.03
MINDY4-202ENST00000409881 PRDM5Q9NQX1 630 aaPredicted RBP15.24■□□□□ 0.03
MINDY4-202ENST00000409881 DMAC2Q9NW81 257 aa15.24■□□□□ 0.03
MINDY4-202ENST00000409881 AGO2Q9UKV8 859 aaKnown RBP15.24■□□□□ 0.03
MINDY4-202ENST00000409881 PITPNM1O00562 1244 aa15.24■□□□□ 0.03
MINDY4-202ENST00000409881 ATP6V1G2O95670 118 aa15.24■□□□□ 0.03
MINDY4-202ENST00000409881 HOXA11P31270 313 aaPredicted RBP15.24■□□□□ 0.03
MINDY4-202ENST00000409881 MAGOHP61326 146 aaKnown RBP15.24■□□□□ 0.03
MINDY4-202ENST00000409881 IFFO1Q0D2I5 559 aa15.24■□□□□ 0.03
MINDY4-202ENST00000409881 MBTPS1Q14703 1052 aa15.24■□□□□ 0.03
MINDY4-202ENST00000409881 PTPROQ16827 1216 aa15.24■□□□□ 0.03
MINDY4-202ENST00000409881 MEI1Q5TIA1 1274 aa15.24■□□□□ 0.03
MINDY4-202ENST00000409881 SLC9A9Q8IVB4 645 aa15.24■□□□□ 0.03
MINDY4-202ENST00000409881 FMNL3Q8IVF7 1028 aa15.24■□□□□ 0.03
MINDY4-202ENST00000409881 RDH13Q8NBN7 331 aa15.24■□□□□ 0.03
MINDY4-202ENST00000409881 MAGOHBQ96A72 148 aaKnown RBP15.24■□□□□ 0.03
MINDY4-202ENST00000409881 PTPRHQ9HD43 1115 aa15.24■□□□□ 0.03
MINDY4-202ENST00000409881 FBXL5Q9UKA1 691 aa15.24■□□□□ 0.03
MINDY4-202ENST00000409881 TBX21Q9UL17 535 aa15.24■□□□□ 0.03
MINDY4-202ENST00000409881 FRMD4BQ9Y2L6 1034 aa15.24■□□□□ 0.03
MINDY4-202ENST00000409881 STYXL1Q9Y6J8 313 aa15.24■□□□□ 0.03
MINDY4-202ENST00000409881 A0A0B4J269 797 aa15.23■□□□□ 0.03
MINDY4-202ENST00000409881 GPR182O15218 404 aa15.23■□□□□ 0.03
MINDY4-202ENST00000409881 AKAP3O75969 853 aa15.23■□□□□ 0.03
MINDY4-202ENST00000409881 PROZP22891 400 aa15.23■□□□□ 0.03
MINDY4-202ENST00000409881 CYP2C18P33260 490 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms