RNA–Protein interactions for RNA: ENST00000409796.5

LYSMD4-204, Transcript of LysM domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD4, Length 2,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-204ENST00000409796 CRELD2Q6UXH1 353 aaPredicted RBP16.06■□□□□ 0.16
LYSMD4-204ENST00000409796 TRIM72Q6ZMU5 477 aa16.06■□□□□ 0.16
LYSMD4-204ENST00000409796 PHF13Q86YI8 300 aaPredicted RBP16.06■□□□□ 0.16
LYSMD4-204ENST00000409796 CEP120Q8N960 986 aa16.06■□□□□ 0.16
LYSMD4-204ENST00000409796 GPRASP2Q96D09 838 aa16.06■□□□□ 0.16
LYSMD4-204ENST00000409796 STAMBPL1Q96FJ0 436 aa16.06■□□□□ 0.16
LYSMD4-204ENST00000409796 ZBTB45Q96K62 511 aaPredicted RBP16.06■□□□□ 0.16
LYSMD4-204ENST00000409796 HAPLN2Q9GZV7 340 aa16.06■□□□□ 0.16
LYSMD4-204ENST00000409796 RPAP3Q9H6T3 665 aaPredicted RBP16.06■□□□□ 0.16
LYSMD4-204ENST00000409796 KIAA1586Q9HCI6 787 aa16.06■□□□□ 0.16
LYSMD4-204ENST00000409796 SAYSD1Q9NPB0 183 aa16.06■□□□□ 0.16
LYSMD4-204ENST00000409796 RNF146Q9NTX7 359 aa16.06■□□□□ 0.16
LYSMD4-204ENST00000409796 AGO2Q9UKV8 859 aaKnown RBP16.06■□□□□ 0.16
LYSMD4-204ENST00000409796 TRIM33Q9UPN9 1127 aa16.06■□□□□ 0.16
LYSMD4-204ENST00000409796 ACTL7BQ9Y614 415 aa16.06■□□□□ 0.16
LYSMD4-204ENST00000409796 WNT10BO00744 389 aa16.06■□□□□ 0.16
LYSMD4-204ENST00000409796 PSAPP07602 524 aa16.06■□□□□ 0.16
LYSMD4-204ENST00000409796 GCAP28676 217 aa16.06■□□□□ 0.16
LYSMD4-204ENST00000409796 NFX1Q12986 1120 aaKnown RBP16.06■□□□□ 0.16
LYSMD4-204ENST00000409796 MTFR1Q15390 333 aa16.06■□□□□ 0.16
LYSMD4-204ENST00000409796 C11orf91Q3C1V1 193 aa16.06■□□□□ 0.16
LYSMD4-204ENST00000409796 MTERF2Q49AM1 385 aa16.06■□□□□ 0.16
LYSMD4-204ENST00000409796 RBBP8NLQ8NC74 664 aaPredicted RBP16.06■□□□□ 0.16
LYSMD4-204ENST00000409796 CAMKK2Q96RR4 588 aa16.06■□□□□ 0.16
LYSMD4-204ENST00000409796 PLCD4Q9BRC7 762 aa16.06■□□□□ 0.16
LYSMD4-204ENST00000409796 DNPEPQ9ULA0 475 aa16.06■□□□□ 0.16
LYSMD4-204ENST00000409796 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.06■□□□□ 0.16
LYSMD4-204ENST00000409796 A0A1B0GUA9 196 aa16.05■□□□□ 0.16
LYSMD4-204ENST00000409796 LIASO43766 372 aa16.05■□□□□ 0.16
LYSMD4-204ENST00000409796 SPAG7O75391 227 aa16.05■□□□□ 0.16
LYSMD4-204ENST00000409796 RGS20O76081 388 aa16.05■□□□□ 0.16
LYSMD4-204ENST00000409796 KRT16P08779 473 aa16.05■□□□□ 0.16
LYSMD4-204ENST00000409796 RPSAP08865 295 aaKnown RBP16.05■□□□□ 0.16
LYSMD4-204ENST00000409796 ABHD2P08910 425 aa16.05■□□□□ 0.16
LYSMD4-204ENST00000409796 MTMR2Q13614 643 aa16.05■□□□□ 0.16
LYSMD4-204ENST00000409796 ZBTB41Q5SVQ8 909 aa16.05■□□□□ 0.16
LYSMD4-204ENST00000409796 PPP1R21Q6ZMI0 780 aa16.05■□□□□ 0.16
LYSMD4-204ENST00000409796 ANKRD35Q8N283 1001 aa16.05■□□□□ 0.16
LYSMD4-204ENST00000409796 ANKLE1Q8NAG6 615 aa16.05■□□□□ 0.16
LYSMD4-204ENST00000409796 FEZF2Q8TBJ5 459 aa16.05■□□□□ 0.16
LYSMD4-204ENST00000409796 AGAP11Q8TF27 550 aa16.05■□□□□ 0.16
LYSMD4-204ENST00000409796 PRCCQ92733 491 aaPredicted RBP16.05■□□□□ 0.16
LYSMD4-204ENST00000409796 ATG4CQ96DT6 458 aa16.05■□□□□ 0.16
LYSMD4-204ENST00000409796 VCPIP1Q96JH7 1222 aa16.05■□□□□ 0.16
LYSMD4-204ENST00000409796 PAIP2Q9BPZ3 127 aaKnown RBP16.05■□□□□ 0.16
LYSMD4-204ENST00000409796 L3MBTL1Q9Y468 752 aa16.05■□□□□ 0.16
LYSMD4-204ENST00000409796 SCINQ9Y6U3 715 aa16.05■□□□□ 0.16
LYSMD4-204ENST00000409796 COL11A1P12107 1806 aaPredicted RBP16.05■□□□□ 0.16
LYSMD4-204ENST00000409796 PARP14Q460N5 1801 aa16.05■□□□□ 0.16
LYSMD4-204ENST00000409796 A8MUI8 341 aa16.05■□□□□ 0.16
LYSMD4-204ENST00000409796 DNALI1O14645 258 aaPredicted RBP16.05■□□□□ 0.16
LYSMD4-204ENST00000409796 POTEJP0CG39 1038 aa16.05■□□□□ 0.16
LYSMD4-204ENST00000409796 ETS1P14921 441 aa16.05■□□□□ 0.16
LYSMD4-204ENST00000409796 RPL7AP62424 266 aaKnown RBP16.05■□□□□ 0.16
LYSMD4-204ENST00000409796 RNF43Q68DV7 783 aa16.05■□□□□ 0.16
LYSMD4-204ENST00000409796 SCARA3Q6AZY7 606 aa16.05■□□□□ 0.16
LYSMD4-204ENST00000409796 FAM47EQ6ZV65 393 aa16.05■□□□□ 0.16
LYSMD4-204ENST00000409796 ECHDC2Q86YB7 292 aa16.05■□□□□ 0.16
LYSMD4-204ENST00000409796 ZBED3Q96IU2 234 aaPredicted RBP16.05■□□□□ 0.16
LYSMD4-204ENST00000409796 KLHL14Q9P2G3 628 aa16.05■□□□□ 0.16
LYSMD4-204ENST00000409796 NUB1Q9Y5A7 615 aa16.05■□□□□ 0.16
LYSMD4-204ENST00000409796 EXOC1LA0A1B0GW35 172 aa16.04■□□□□ 0.16
LYSMD4-204ENST00000409796 FAM47DPA6NHR8 397 aa16.04■□□□□ 0.16
LYSMD4-204ENST00000409796 VWA5AO00534 786 aa16.04■□□□□ 0.16
LYSMD4-204ENST00000409796 DKC1O60832 514 aaKnown RBP eCLIP16.04■□□□□ 0.16
LYSMD4-204ENST00000409796 SKAP2O75563 359 aaPredicted RBP16.04■□□□□ 0.16
LYSMD4-204ENST00000409796 ALADP13716 330 aa16.04■□□□□ 0.16
LYSMD4-204ENST00000409796 CCNHP51946 323 aaPredicted RBP16.04■□□□□ 0.16
LYSMD4-204ENST00000409796 HP1BP3Q5SSJ5 553 aaPredicted RBP16.04■□□□□ 0.16
LYSMD4-204ENST00000409796 ZFYVE27Q5T4F4 411 aa16.04■□□□□ 0.16
LYSMD4-204ENST00000409796 MFSD7Q6UXD7 560 aa16.04■□□□□ 0.16
LYSMD4-204ENST00000409796 ASRGL1Q7L266 308 aa16.04■□□□□ 0.16
LYSMD4-204ENST00000409796 TRABD2AQ86V40 505 aa16.04■□□□□ 0.16
LYSMD4-204ENST00000409796 RIBC1Q8N443 379 aaPredicted RBP16.04■□□□□ 0.16
LYSMD4-204ENST00000409796 SLITRK1Q96PX8 696 aa16.04■□□□□ 0.16
LYSMD4-204ENST00000409796 PITPNM3Q9BZ71 974 aa16.04■□□□□ 0.16
LYSMD4-204ENST00000409796 ARHGEF3Q9NR81 526 aa16.04■□□□□ 0.16
LYSMD4-204ENST00000409796 ATF7P17544 494 aaPredicted RBP16.04■□□□□ 0.16
LYSMD4-204ENST00000409796 IL9RQ01113 521 aa16.04■□□□□ 0.16
LYSMD4-204ENST00000409796 C1QBPQ07021 282 aaKnown RBP16.04■□□□□ 0.16
LYSMD4-204ENST00000409796 NAA25Q14CX7 972 aa16.04■□□□□ 0.16
LYSMD4-204ENST00000409796 FASTKD3Q14CZ7 662 aaKnown RBP16.04■□□□□ 0.16
LYSMD4-204ENST00000409796 XRRA1Q6P2D8 792 aa16.04■□□□□ 0.16
LYSMD4-204ENST00000409796 TMEM143Q96AN5 459 aa16.04■□□□□ 0.16
LYSMD4-204ENST00000409796 CFAP57Q96MR6 1250 aa16.04■□□□□ 0.16
LYSMD4-204ENST00000409796 FOXP3Q9BZS1 431 aa16.04■□□□□ 0.16
LYSMD4-204ENST00000409796 JPH1Q9HDC5 661 aaPredicted RBP16.04■□□□□ 0.16
LYSMD4-204ENST00000409796 PARVAQ9NVD7 372 aa16.04■□□□□ 0.16
LYSMD4-204ENST00000409796 RBAKQ9NYW8 714 aaPredicted RBP16.04■□□□□ 0.16
LYSMD4-204ENST00000409796 ZNF148Q9UQR1 794 aa16.04■□□□□ 0.16
LYSMD4-204ENST00000409796 STYXL1Q9Y6J8 313 aa16.04■□□□□ 0.16
LYSMD4-204ENST00000409796 POC1B-GALNT4F8VUJ3 575 aa16.03■□□□□ 0.16
LYSMD4-204ENST00000409796 H0YCG3 227 aa16.03■□□□□ 0.16
LYSMD4-204ENST00000409796 KIF3CO14782 793 aa16.03■□□□□ 0.16
LYSMD4-204ENST00000409796 KRT1P04264 644 aa16.03■□□□□ 0.16
LYSMD4-204ENST00000409796 ACTR2P61160 394 aa16.03■□□□□ 0.16
LYSMD4-204ENST00000409796 LMNB2Q03252 620 aa16.03■□□□□ 0.16
LYSMD4-204ENST00000409796 OR5B17Q8NGF7 314 aa16.03■□□□□ 0.16
LYSMD4-204ENST00000409796 EBF2Q9HAK2 575 aa16.03■□□□□ 0.16
LYSMD4-204ENST00000409796 KIF9Q9HAQ2 790 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms