RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 SLC35G2Q8TBE7 412 aa15□□□□□ -0.01
GPNMB-203ENST00000409458 WHAMMQ8TF30 809 aa15□□□□□ -0.01
GPNMB-203ENST00000409458 ZNF606Q8WXB4 792 aa15□□□□□ -0.01
GPNMB-203ENST00000409458 CYFIP2Q96F07 1278 aa15□□□□□ -0.01
GPNMB-203ENST00000409458 PPP1R10Q96QC0 940 aaKnown RBP15□□□□□ -0.01
GPNMB-203ENST00000409458 TWNKQ96RR1 684 aa15□□□□□ -0.01
GPNMB-203ENST00000409458 JRKLQ9Y4A0 524 aa15□□□□□ -0.01
GPNMB-203ENST00000409458 PIRO00625 290 aa15□□□□□ -0.01
GPNMB-203ENST00000409458 NCK2O43639 380 aa15□□□□□ -0.01
GPNMB-203ENST00000409458 SLU7O95391 586 aaKnown RBP15□□□□□ -0.01
GPNMB-203ENST00000409458 CD4P01730 458 aa15□□□□□ -0.01
GPNMB-203ENST00000409458 TFRCP02786 760 aaKnown RBP15□□□□□ -0.01
GPNMB-203ENST00000409458 ATF7P17544 494 aaPredicted RBP15□□□□□ -0.01
GPNMB-203ENST00000409458 CYP3A5P20815 502 aa15□□□□□ -0.01
GPNMB-203ENST00000409458 RAB27AP51159 221 aa15□□□□□ -0.01
GPNMB-203ENST00000409458 RAD23BP54727 409 aa15□□□□□ -0.01
GPNMB-203ENST00000409458 NOMO3P69849 1222 aa15□□□□□ -0.01
GPNMB-203ENST00000409458 CENPCQ03188 943 aa15□□□□□ -0.01
GPNMB-203ENST00000409458 SMYD5Q6GMV2 418 aa15□□□□□ -0.01
GPNMB-203ENST00000409458 AGMOQ6ZNB7 445 aa15□□□□□ -0.01
GPNMB-203ENST00000409458 MRPL10Q7Z7H8 261 aaKnown RBP15□□□□□ -0.01
GPNMB-203ENST00000409458 LRRC57Q8N9N7 239 aa15□□□□□ -0.01
GPNMB-203ENST00000409458 GSTCDQ8NEC7 633 aa15□□□□□ -0.01
GPNMB-203ENST00000409458 CAGE1Q8TC20 777 aa15□□□□□ -0.01
GPNMB-203ENST00000409458 TFAP2BQ92481 460 aa15□□□□□ -0.01
GPNMB-203ENST00000409458 MMS19Q96T76 1030 aa15□□□□□ -0.01
GPNMB-203ENST00000409458 GAD1Q99259 594 aa15□□□□□ -0.01
GPNMB-203ENST00000409458 ADAM2Q99965 735 aa15□□□□□ -0.01
GPNMB-203ENST00000409458 TRAIPQ9BWF2 469 aa15□□□□□ -0.01
GPNMB-203ENST00000409458 ELOVL4Q9GZR5 314 aa15□□□□□ -0.01
GPNMB-203ENST00000409458 PDCL3Q9H2J4 239 aa15□□□□□ -0.01
GPNMB-203ENST00000409458 COG5Q9UP83 839 aa15□□□□□ -0.01
GPNMB-203ENST00000409458 FTCDO95954 541 aa14.99□□□□□ -0.01
GPNMB-203ENST00000409458 GTF2F1P35269 517 aaKnown RBP eCLIP14.99□□□□□ -0.01
GPNMB-203ENST00000409458 AFF1P51825 1210 aaKnown RBP14.99□□□□□ -0.01
GPNMB-203ENST00000409458 GPC5P78333 572 aa14.99□□□□□ -0.01
GPNMB-203ENST00000409458 INCA1Q0VD86 236 aa14.99□□□□□ -0.01
GPNMB-203ENST00000409458 IFI16Q16666 785 aaKnown RBP14.99□□□□□ -0.01
GPNMB-203ENST00000409458 TRIM72Q6ZMU5 477 aa14.99□□□□□ -0.01
GPNMB-203ENST00000409458 SLC4A11Q8NBS3 891 aa14.99□□□□□ -0.01
GPNMB-203ENST00000409458 CPA5Q8WXQ8 436 aa14.99□□□□□ -0.01
GPNMB-203ENST00000409458 ZNF653Q96CK0 615 aa14.99□□□□□ -0.01
GPNMB-203ENST00000409458 CARD6Q9BX69 1037 aa14.99□□□□□ -0.01
GPNMB-203ENST00000409458 SEZ6LQ9BYH1 1024 aa14.99□□□□□ -0.01
GPNMB-203ENST00000409458 GOLPH3Q9H4A6 298 aa14.99□□□□□ -0.01
GPNMB-203ENST00000409458 CHORDC1Q9UHD1 332 aaPredicted RBP14.99□□□□□ -0.01
GPNMB-203ENST00000409458 CDC23Q9UJX2 597 aa14.99□□□□□ -0.01
GPNMB-203ENST00000409458 GIT1Q9Y2X7 761 aa14.99□□□□□ -0.01
GPNMB-203ENST00000409458 SNX9Q9Y5X1 595 aa14.99□□□□□ -0.01
GPNMB-203ENST00000409458 A0A0U1RQF3 1178 aa14.98□□□□□ -0.01
GPNMB-203ENST00000409458 SPTLC1O15269 473 aa14.98□□□□□ -0.01
GPNMB-203ENST00000409458 SRGAP2O75044 1071 aa14.98□□□□□ -0.01
GPNMB-203ENST00000409458 PAEPP09466 180 aa14.98□□□□□ -0.01
GPNMB-203ENST00000409458 IBSPP21815 317 aaPredicted RBP14.98□□□□□ -0.01
GPNMB-203ENST00000409458 MNX1P50219 401 aaPredicted RBP14.98□□□□□ -0.01
GPNMB-203ENST00000409458 LRRC8DQ7L1W4 858 aa14.98□□□□□ -0.01
GPNMB-203ENST00000409458 RHOT2Q8IXI1 618 aa14.98□□□□□ -0.01
GPNMB-203ENST00000409458 DNAJC5GQ8N7S2 189 aa14.98□□□□□ -0.01
GPNMB-203ENST00000409458 RNF169Q8NCN4 708 aa14.98□□□□□ -0.01
GPNMB-203ENST00000409458 LINC01599Q8WXQ3 324 aa14.98□□□□□ -0.01
GPNMB-203ENST00000409458 ZNF560Q96MR9 790 aa14.98□□□□□ -0.01
GPNMB-203ENST00000409458 RPS6KC1Q96S38 1066 aa14.98□□□□□ -0.01
GPNMB-203ENST00000409458 MRPL45Q9BRJ2 306 aaKnown RBP14.98□□□□□ -0.01
GPNMB-203ENST00000409458 TLR10Q9BXR5 811 aa14.98□□□□□ -0.01
GPNMB-203ENST00000409458 MIOSQ9NXC5 875 aa14.98□□□□□ -0.01
GPNMB-203ENST00000409458 GTF3C4Q9UKN8 822 aa14.98□□□□□ -0.01
GPNMB-203ENST00000409458 BARX2Q9UMQ3 279 aaPredicted RBP14.98□□□□□ -0.01
GPNMB-203ENST00000409458 SAR1BQ9Y6B6 198 aa14.98□□□□□ -0.01
GPNMB-203ENST00000409458 TANC1Q9C0D5 1861 aa14.98□□□□□ -0.01
GPNMB-203ENST00000409458 ARL5CA6NH57 179 aa14.97□□□□□ -0.01
GPNMB-203ENST00000409458 ZNF623O75123 536 aa14.97□□□□□ -0.01
GPNMB-203ENST00000409458 CYP1A2P05177 515 aa14.97□□□□□ -0.01
GPNMB-203ENST00000409458 CD19P15391 556 aa14.97□□□□□ -0.01
GPNMB-203ENST00000409458 SELPP16109 830 aa14.97□□□□□ -0.01
GPNMB-203ENST00000409458 LRPAP1P30533 357 aa14.97□□□□□ -0.01
GPNMB-203ENST00000409458 NSFP46459 744 aaKnown RBP14.97□□□□□ -0.01
GPNMB-203ENST00000409458 SCNN1GP51170 649 aa14.97□□□□□ -0.01
GPNMB-203ENST00000409458 NDST1P52848 882 aa14.97□□□□□ -0.01
GPNMB-203ENST00000409458 TCEAL1Q15170 157 aa14.97□□□□□ -0.01
GPNMB-203ENST00000409458 MEI1Q5TIA1 1274 aa14.97□□□□□ -0.01
GPNMB-203ENST00000409458 MON1BQ7L1V2 547 aa14.97□□□□□ -0.01
GPNMB-203ENST00000409458 MCOLN2Q8IZK6 566 aa14.97□□□□□ -0.01
GPNMB-203ENST00000409458 TMEM176AQ96HP8 235 aa14.97□□□□□ -0.01
GPNMB-203ENST00000409458 CTTNBP2NLQ9P2B4 639 aa14.97□□□□□ -0.01
GPNMB-203ENST00000409458 CACNG4Q9UBN1 327 aa14.97□□□□□ -0.01
GPNMB-203ENST00000409458 SNX12Q9UMY4 172 aa14.97□□□□□ -0.01
GPNMB-203ENST00000409458 PCDHGC3Q9UN70 934 aa14.97□□□□□ -0.01
GPNMB-203ENST00000409458 PACSIN2Q9UNF0 486 aaPredicted RBP14.97□□□□□ -0.01
GPNMB-203ENST00000409458 CTIFO43310 598 aaKnown RBP14.97□□□□□ -0.01
GPNMB-203ENST00000409458 BUB1BO60566 1050 aaPredicted RBP14.97□□□□□ -0.01
GPNMB-203ENST00000409458 PQBP1O60828 265 aaKnown RBP14.97□□□□□ -0.01
GPNMB-203ENST00000409458 HSPA8P11142 646 aaKnown RBP14.97□□□□□ -0.01
GPNMB-203ENST00000409458 PNPLA4P41247 253 aa14.97□□□□□ -0.01
GPNMB-203ENST00000409458 TAF6P49848 677 aa14.97□□□□□ -0.01
GPNMB-203ENST00000409458 HADHBP55084 474 aaKnown RBP14.97□□□□□ -0.01
GPNMB-203ENST00000409458 TUBB2AQ13885 445 aa14.97□□□□□ -0.01
GPNMB-203ENST00000409458 PTPROQ16827 1216 aa14.97□□□□□ -0.01
GPNMB-203ENST00000409458 CTU1Q7Z7A3 348 aaKnown RBP14.97□□□□□ -0.01
GPNMB-203ENST00000409458 SLFN11Q7Z7L1 901 aa14.97□□□□□ -0.01
GPNMB-203ENST00000409458 ECHDC2Q86YB7 292 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms