RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 PIDD1Q9HB75 910 aa10.48□□□□□ -0.73
NIF3L1-202ENST00000409020 SLC38A7Q9NVC3 462 aa10.48□□□□□ -0.73
NIF3L1-202ENST00000409020 ZDHHC7Q9NXF8 308 aa10.48□□□□□ -0.73
NIF3L1-202ENST00000409020 TIMM13Q9Y5L4 95 aaPredicted RBP10.48□□□□□ -0.73
NIF3L1-202ENST00000409020 GOLGA6CA6NDK9 693 aa10.47□□□□□ -0.73
NIF3L1-202ENST00000409020 GOLGA6BA6NDN3 693 aa10.47□□□□□ -0.73
NIF3L1-202ENST00000409020 ERICH4A6NGS2 130 aa10.47□□□□□ -0.73
NIF3L1-202ENST00000409020 TBC1D4O60343 1298 aa10.47□□□□□ -0.73
NIF3L1-202ENST00000409020 NFICP08651 508 aa10.47□□□□□ -0.73
NIF3L1-202ENST00000409020 CLTAP09496 248 aa10.47□□□□□ -0.73
NIF3L1-202ENST00000409020 GOLGA6DP0CG33 693 aa10.47□□□□□ -0.73
NIF3L1-202ENST00000409020 ADSSP30520 456 aa10.47□□□□□ -0.73
NIF3L1-202ENST00000409020 ACOT2P49753 483 aa10.47□□□□□ -0.73
NIF3L1-202ENST00000409020 CDR1P51861 262 aa10.47□□□□□ -0.73
NIF3L1-202ENST00000409020 ARPP19P56211 112 aa10.47□□□□□ -0.73
NIF3L1-202ENST00000409020 WNT7BP56706 349 aa10.47□□□□□ -0.73
NIF3L1-202ENST00000409020 ZBTB6Q15916 424 aa10.47□□□□□ -0.73
NIF3L1-202ENST00000409020 SCARA3Q6AZY7 606 aa10.47□□□□□ -0.73
NIF3L1-202ENST00000409020 FBXL6Q8N531 539 aa10.47□□□□□ -0.73
NIF3L1-202ENST00000409020 KRI1Q8N9T8 703 aaKnown RBP10.47□□□□□ -0.73
NIF3L1-202ENST00000409020 GLIS3Q8NEA6 775 aa10.47□□□□□ -0.73
NIF3L1-202ENST00000409020 ITFG1Q8TB96 612 aa10.47□□□□□ -0.73
NIF3L1-202ENST00000409020 HPS3Q969F9 1004 aa10.47□□□□□ -0.73
NIF3L1-202ENST00000409020 CHAMP1Q96JM3 812 aa10.47□□□□□ -0.73
NIF3L1-202ENST00000409020 RPP25Q9BUL9 199 aaKnown RBP10.47□□□□□ -0.73
NIF3L1-202ENST00000409020 RHOBTB2Q9BYZ6 727 aa10.47□□□□□ -0.73
NIF3L1-202ENST00000409020 ETAA1Q9NY74 926 aa10.47□□□□□ -0.73
NIF3L1-202ENST00000409020 GOLGA6AQ9NYA3 693 aa10.47□□□□□ -0.73
NIF3L1-202ENST00000409020 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.47□□□□□ -0.73
NIF3L1-202ENST00000409020 POLIQ9UNA4 740 aa10.47□□□□□ -0.73
NIF3L1-202ENST00000409020 BACE2Q9Y5Z0 518 aa10.47□□□□□ -0.73
NIF3L1-202ENST00000409020 CITO14578 2027 aa10.47□□□□□ -0.73
NIF3L1-202ENST00000409020 PDCD11Q14690 1871 aaKnown RBP10.47□□□□□ -0.73
NIF3L1-202ENST00000409020 KMT2EQ8IZD2 1858 aa10.47□□□□□ -0.73
NIF3L1-202ENST00000409020 DOCK8Q8NF50 2099 aa10.47□□□□□ -0.73
NIF3L1-202ENST00000409020 MTCL1Q9Y4B5 1905 aaKnown RBP10.47□□□□□ -0.73
NIF3L1-202ENST00000409020 H0YCG3 227 aa10.47□□□□□ -0.73
NIF3L1-202ENST00000409020 SPTLC1O15269 473 aa10.47□□□□□ -0.73
NIF3L1-202ENST00000409020 OGTO15294 1046 aa10.47□□□□□ -0.73
NIF3L1-202ENST00000409020 SEC24AO95486 1093 aa10.47□□□□□ -0.73
NIF3L1-202ENST00000409020 TNNT1P13805 278 aa10.47□□□□□ -0.73
NIF3L1-202ENST00000409020 RPL9P32969 192 aaKnown RBP10.47□□□□□ -0.73
NIF3L1-202ENST00000409020 MAGEA8P43361 318 aa10.47□□□□□ -0.73
NIF3L1-202ENST00000409020 MAGEA9P43362 315 aa10.47□□□□□ -0.73
NIF3L1-202ENST00000409020 ADCY2Q08462 1091 aa10.47□□□□□ -0.73
NIF3L1-202ENST00000409020 MRPL58Q14197 206 aaKnown RBP10.47□□□□□ -0.73
NIF3L1-202ENST00000409020 PPM1LQ5SGD2 360 aa10.47□□□□□ -0.73
NIF3L1-202ENST00000409020 LIN9Q5TKA1 542 aa10.47□□□□□ -0.73
NIF3L1-202ENST00000409020 JADE1Q6IE81 842 aa10.47□□□□□ -0.73
NIF3L1-202ENST00000409020 SLC8B1Q6J4K2 584 aa10.47□□□□□ -0.73
NIF3L1-202ENST00000409020 ZNF720Q7Z2F6 126 aa10.47□□□□□ -0.73
NIF3L1-202ENST00000409020 UBALD2Q8IYN6 164 aa10.47□□□□□ -0.73
NIF3L1-202ENST00000409020 PHOX2BQ99453 314 aa10.47□□□□□ -0.73
NIF3L1-202ENST00000409020 STRA6Q9BX79 667 aa10.47□□□□□ -0.73
NIF3L1-202ENST00000409020 ZSCAN16Q9H4T2 348 aaPredicted RBP10.47□□□□□ -0.73
NIF3L1-202ENST00000409020 EPS15L1Q9UBC2 864 aa10.47□□□□□ -0.73
NIF3L1-202ENST00000409020 STK17AQ9UEE5 414 aa10.47□□□□□ -0.73
NIF3L1-202ENST00000409020 DPP7Q9UHL4 492 aa10.47□□□□□ -0.73
NIF3L1-202ENST00000409020 FBXL5Q9UKA1 691 aa10.47□□□□□ -0.73
NIF3L1-202ENST00000409020 CPSF3Q9UKF6 684 aaKnown RBP10.47□□□□□ -0.73
NIF3L1-202ENST00000409020 COL4A3Q01955 1670 aa10.46□□□□□ -0.73
NIF3L1-202ENST00000409020 SPTLC2O15270 562 aa10.46□□□□□ -0.74
NIF3L1-202ENST00000409020 TRAPPC3O43617 180 aa10.46□□□□□ -0.74
NIF3L1-202ENST00000409020 VNN2O95498 520 aa10.46□□□□□ -0.74
NIF3L1-202ENST00000409020 C1RP00736 705 aa10.46□□□□□ -0.74
NIF3L1-202ENST00000409020 OR4Q2P0C623 313 aa10.46□□□□□ -0.74
NIF3L1-202ENST00000409020 FSHRP23945 695 aa10.46□□□□□ -0.74
NIF3L1-202ENST00000409020 ABCD1P33897 745 aa10.46□□□□□ -0.74
NIF3L1-202ENST00000409020 STAT6P42226 847 aa10.46□□□□□ -0.74
NIF3L1-202ENST00000409020 NHLH1Q02575 133 aa10.46□□□□□ -0.74
NIF3L1-202ENST00000409020 PPP2R3AQ06190 1150 aa10.46□□□□□ -0.74
NIF3L1-202ENST00000409020 TCF15Q12870 199 aa10.46□□□□□ -0.74
NIF3L1-202ENST00000409020 TDGQ13569 410 aa10.46□□□□□ -0.74
NIF3L1-202ENST00000409020 STK38Q15208 465 aa10.46□□□□□ -0.74
NIF3L1-202ENST00000409020 SLC5A9Q2M3M2 681 aa10.46□□□□□ -0.74
NIF3L1-202ENST00000409020 ADALQ6DHV7 355 aa10.46□□□□□ -0.74
NIF3L1-202ENST00000409020 ELMSAN1Q6PJG2 1045 aa10.46□□□□□ -0.74
NIF3L1-202ENST00000409020 SHC4Q6S5L8 630 aa10.46□□□□□ -0.74
NIF3L1-202ENST00000409020 CRELD2Q6UXH1 353 aaPredicted RBP10.46□□□□□ -0.74
NIF3L1-202ENST00000409020 ANKS3Q6ZW76 656 aa10.46□□□□□ -0.74
NIF3L1-202ENST00000409020 SV2BQ7L1I2 683 aa10.46□□□□□ -0.74
NIF3L1-202ENST00000409020 TMEM105Q8N8V8 129 aa10.46□□□□□ -0.74
NIF3L1-202ENST00000409020 FGF14Q92915 247 aa10.46□□□□□ -0.74
NIF3L1-202ENST00000409020 SUSD3Q96L08 255 aa10.46□□□□□ -0.74
NIF3L1-202ENST00000409020 ST6GALNAC4Q9H4F1 302 aa10.46□□□□□ -0.74
NIF3L1-202ENST00000409020 DNMT3BQ9UBC3 853 aaKnown RBP10.46□□□□□ -0.74
NIF3L1-202ENST00000409020 ZNF292O60281 2723 aa10.45□□□□□ -0.74
NIF3L1-202ENST00000409020 NOTCH4Q99466 2003 aa10.45□□□□□ -0.74
NIF3L1-202ENST00000409020 FRMD3A2A2Y4 597 aa10.45□□□□□ -0.74
NIF3L1-202ENST00000409020 SYN3O14994 580 aa10.45□□□□□ -0.74
NIF3L1-202ENST00000409020 ABLIM3O94929 683 aa10.45□□□□□ -0.74
NIF3L1-202ENST00000409020 ADRB2P07550 413 aa10.45□□□□□ -0.74
NIF3L1-202ENST00000409020 CFHP08603 1231 aa10.45□□□□□ -0.74
NIF3L1-202ENST00000409020 LAMP2P13473 410 aa10.45□□□□□ -0.74
NIF3L1-202ENST00000409020 IDEP14735 1019 aa10.45□□□□□ -0.74
NIF3L1-202ENST00000409020 NPR3P17342 541 aa10.45□□□□□ -0.74
NIF3L1-202ENST00000409020 CASP1P29466 404 aa10.45□□□□□ -0.74
NIF3L1-202ENST00000409020 LRPAP1P30533 357 aa10.45□□□□□ -0.74
NIF3L1-202ENST00000409020 TXLNAP40222 546 aa10.45□□□□□ -0.74
NIF3L1-202ENST00000409020 KLHL40Q2TBA0 621 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms