RNA–Protein interactions for RNA: ENST00000407622.2

COL23A1-202, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL23A1, Length 2,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-202ENST00000407622 ZNF365Q70YC5 407 aa17.55■□□□□ 0.4
COL23A1-202ENST00000407622 SNX3O60493 162 aa17.55■□□□□ 0.4
COL23A1-202ENST00000407622 ETS1P14921 441 aa17.55■□□□□ 0.4
COL23A1-202ENST00000407622 XRCC4Q13426 336 aa17.55■□□□□ 0.4
COL23A1-202ENST00000407622 P3H1Q32P28 736 aa17.55■□□□□ 0.4
COL23A1-202ENST00000407622 FAM228AQ86W67 206 aa17.55■□□□□ 0.4
COL23A1-202ENST00000407622 EXD1Q8NHP7 514 aa17.55■□□□□ 0.4
COL23A1-202ENST00000407622 FEZF2Q8TBJ5 459 aa17.55■□□□□ 0.4
COL23A1-202ENST00000407622 ZNF606Q8WXB4 792 aa17.55■□□□□ 0.4
COL23A1-202ENST00000407622 PCYT2Q99447 389 aa17.55■□□□□ 0.4
COL23A1-202ENST00000407622 MRPL47Q9HD33 250 aaKnown RBP17.55■□□□□ 0.4
COL23A1-202ENST00000407622 ZNF112Q9UJU3 913 aa17.55■□□□□ 0.4
COL23A1-202ENST00000407622 DNPEPQ9ULA0 475 aa17.55■□□□□ 0.4
COL23A1-202ENST00000407622 CNTN6Q9UQ52 1028 aa17.55■□□□□ 0.4
COL23A1-202ENST00000407622 SPDYE16A6NNV3 312 aaPredicted RBP17.54■□□□□ 0.4
COL23A1-202ENST00000407622 OAS1P00973 400 aaKnown RBP17.54■□□□□ 0.4
COL23A1-202ENST00000407622 BRAFP15056 766 aa17.54■□□□□ 0.4
COL23A1-202ENST00000407622 OGDHQ02218 1023 aa17.54■□□□□ 0.4
COL23A1-202ENST00000407622 NFX1Q12986 1120 aaKnown RBP17.54■□□□□ 0.4
COL23A1-202ENST00000407622 CAPSQ13938 189 aa17.54■□□□□ 0.4
COL23A1-202ENST00000407622 FAM133BQ5BKY9 247 aaKnown RBP17.54■□□□□ 0.4
COL23A1-202ENST00000407622 TMEM63BQ5T3F8 832 aa17.54■□□□□ 0.4
COL23A1-202ENST00000407622 SWT1Q5T5J6 900 aaKnown RBP17.54■□□□□ 0.4
COL23A1-202ENST00000407622 C9orf131Q5VYM1 1079 aa17.54■□□□□ 0.4
COL23A1-202ENST00000407622 MFSD7Q6UXD7 560 aa17.54■□□□□ 0.4
COL23A1-202ENST00000407622 TRIM72Q6ZMU5 477 aa17.54■□□□□ 0.4
COL23A1-202ENST00000407622 CATSPERGQ6ZRH7 1159 aa17.54■□□□□ 0.4
COL23A1-202ENST00000407622 APOBEC3FQ8IUX4 373 aaKnown RBP17.54■□□□□ 0.4
COL23A1-202ENST00000407622 P3H4Q92791 437 aa17.54■□□□□ 0.4
COL23A1-202ENST00000407622 FAM212AQ96EL1 285 aa17.54■□□□□ 0.4
COL23A1-202ENST00000407622 AS3MTQ9HBK9 375 aa17.54■□□□□ 0.4
COL23A1-202ENST00000407622 SLC12A4Q9UP95 1085 aa17.54■□□□□ 0.4
COL23A1-202ENST00000407622 NAALADL1Q9UQQ1 740 aa17.54■□□□□ 0.4
COL23A1-202ENST00000407622 DNAJC8O75937 253 aaPredicted RBP17.54■□□□□ 0.4
COL23A1-202ENST00000407622 ATG7O95352 703 aa17.54■□□□□ 0.4
COL23A1-202ENST00000407622 ATF7P17544 494 aaPredicted RBP17.54■□□□□ 0.4
COL23A1-202ENST00000407622 CAV1Q03135 178 aa17.54■□□□□ 0.4
COL23A1-202ENST00000407622 C1QBPQ07021 282 aaKnown RBP17.54■□□□□ 0.4
COL23A1-202ENST00000407622 ZNF394Q53GI3 561 aa17.54■□□□□ 0.4
COL23A1-202ENST00000407622 CYP4F22Q6NT55 531 aa17.54■□□□□ 0.4
COL23A1-202ENST00000407622 HIBCHQ6NVY1 386 aaPredicted RBP17.54■□□□□ 0.4
COL23A1-202ENST00000407622 GSTA5Q7RTV2 222 aa17.54■□□□□ 0.4
COL23A1-202ENST00000407622 TRPM8Q7Z2W7 1104 aa17.54■□□□□ 0.4
COL23A1-202ENST00000407622 VCPIP1Q96JH7 1222 aa17.54■□□□□ 0.4
COL23A1-202ENST00000407622 C12orf42Q96LP6 360 aa17.54■□□□□ 0.4
COL23A1-202ENST00000407622 GGA3Q9NZ52 723 aa17.54■□□□□ 0.4
COL23A1-202ENST00000407622 AGAP1Q9UPQ3 857 aa17.54■□□□□ 0.4
COL23A1-202ENST00000407622 IVNS1ABPQ9Y6Y0 642 aa17.54■□□□□ 0.4
COL23A1-202ENST00000407622 F8VP50 259 aa17.53■□□□□ 0.4
COL23A1-202ENST00000407622 MMP8P22894 467 aa17.53■□□□□ 0.4
COL23A1-202ENST00000407622 BRD2P25440 801 aaKnown RBP17.53■□□□□ 0.4
COL23A1-202ENST00000407622 ZNF132P52740 706 aa17.53■□□□□ 0.4
COL23A1-202ENST00000407622 HP1BP3Q5SSJ5 553 aaPredicted RBP17.53■□□□□ 0.4
COL23A1-202ENST00000407622 SLFN12LQ6IEE8 588 aa17.53■□□□□ 0.4
COL23A1-202ENST00000407622 ZBTB33Q86T24 672 aa17.53■□□□□ 0.4
COL23A1-202ENST00000407622 PARP9Q8IXQ6 854 aa17.53■□□□□ 0.4
COL23A1-202ENST00000407622 SRRM1Q8IYB3 904 aaKnown RBP17.53■□□□□ 0.4
COL23A1-202ENST00000407622 UBR7Q8N806 425 aa17.53■□□□□ 0.4
COL23A1-202ENST00000407622 CCDC89Q8N998 374 aa17.53■□□□□ 0.4
COL23A1-202ENST00000407622 SLC7A3Q8WY07 619 aa17.53■□□□□ 0.4
COL23A1-202ENST00000407622 HAUS1Q96CS2 278 aa17.53■□□□□ 0.4
COL23A1-202ENST00000407622 SGSM3Q96HU1 749 aa17.53■□□□□ 0.4
COL23A1-202ENST00000407622 MCEEQ96PE7 176 aa17.53■□□□□ 0.4
COL23A1-202ENST00000407622 SLITRK1Q96PX8 696 aa17.53■□□□□ 0.4
COL23A1-202ENST00000407622 PARVAQ9NVD7 372 aa17.53■□□□□ 0.4
COL23A1-202ENST00000407622 SCINQ9Y6U3 715 aa17.53■□□□□ 0.4
COL23A1-202ENST00000407622 LIASO43766 372 aa17.53■□□□□ 0.4
COL23A1-202ENST00000407622 TCEA3O75764 348 aa17.53■□□□□ 0.4
COL23A1-202ENST00000407622 PSMC4P43686 418 aa17.53■□□□□ 0.4
COL23A1-202ENST00000407622 ZKSCAN8Q15776 578 aaPredicted RBP17.53■□□□□ 0.4
COL23A1-202ENST00000407622 ZFYVE27Q5T4F4 411 aa17.53■□□□□ 0.4
COL23A1-202ENST00000407622 DCAF15Q66K64 600 aa17.53■□□□□ 0.4
COL23A1-202ENST00000407622 NUGGCQ68CJ6 796 aa17.53■□□□□ 0.4
COL23A1-202ENST00000407622 RBM15Q96T37 977 aaKnown RBP eCLIP17.53■□□□□ 0.4
COL23A1-202ENST00000407622 MTMR12Q9C0I1 747 aa17.53■□□□□ 0.4
COL23A1-202ENST00000407622 TPX2Q9ULW0 747 aaKnown RBP17.53■□□□□ 0.4
COL23A1-202ENST00000407622 TMEM191CA6NGB0 347 aa17.52■□□□□ 0.4
COL23A1-202ENST00000407622 ATP2A1O14983 1001 aa17.52■□□□□ 0.4
COL23A1-202ENST00000407622 TMEM191BP0C7N4 346 aa17.52■□□□□ 0.4
COL23A1-202ENST00000407622 UBA1P22314 1058 aaKnown RBP17.52■□□□□ 0.4
COL23A1-202ENST00000407622 TBXAS1P24557 533 aaPredicted RBP17.52■□□□□ 0.4
COL23A1-202ENST00000407622 FASTKD3Q14CZ7 662 aaKnown RBP17.52■□□□□ 0.4
COL23A1-202ENST00000407622 STXBP2Q15833 593 aa17.52■□□□□ 0.4
COL23A1-202ENST00000407622 NSRP1Q9H0G5 558 aaKnown RBP17.52■□□□□ 0.4
COL23A1-202ENST00000407622 EURLQ9NYK6 297 aa17.52■□□□□ 0.4
COL23A1-202ENST00000407622 LGALS13Q9UHV8 139 aa17.52■□□□□ 0.4
COL23A1-202ENST00000407622 GSTTP1A0A1W2PQM5 241 aa17.52■□□□□ 0.39
COL23A1-202ENST00000407622 TCRBV5S1A1TA0A578 114 aa17.52■□□□□ 0.39
COL23A1-202ENST00000407622 FAM189A1O60320 539 aa17.52■□□□□ 0.39
COL23A1-202ENST00000407622 ITGBL1O95965 494 aaPredicted RBP17.52■□□□□ 0.39
COL23A1-202ENST00000407622 KRT1P04264 644 aa17.52■□□□□ 0.39
COL23A1-202ENST00000407622 MYL6P60660 151 aa17.52■□□□□ 0.39
COL23A1-202ENST00000407622 CKAP2Q8WWK9 683 aa17.52■□□□□ 0.39
COL23A1-202ENST00000407622 IP6K2Q9UHH9 426 aa17.52■□□□□ 0.39
COL23A1-202ENST00000407622 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.52■□□□□ 0.39
COL23A1-202ENST00000407622 STAM2O75886 525 aa17.51■□□□□ 0.39
COL23A1-202ENST00000407622 UBOX5O94941 541 aa17.51■□□□□ 0.39
COL23A1-202ENST00000407622 LDHAP00338 332 aaKnown RBP17.51■□□□□ 0.39
COL23A1-202ENST00000407622 ASS1P00966 412 aaKnown RBP17.51■□□□□ 0.39
COL23A1-202ENST00000407622 POTEJP0CG39 1038 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms