RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 CBWD1Q9BRT8 395 aa20.87■□□□□ 0.93
SMARCB1-204ENST00000407422 MAFFQ9ULX9 164 aa20.87■□□□□ 0.93
SMARCB1-204ENST00000407422 COL4A3Q01955 1670 aa20.87■□□□□ 0.93
SMARCB1-204ENST00000407422 GOLGA8IPA6NC78 632 aa20.86■□□□□ 0.93
SMARCB1-204ENST00000407422 OR6C75A6NL08 312 aa20.86■□□□□ 0.93
SMARCB1-204ENST00000407422 GOLGA8JA6NMD2 632 aa20.86■□□□□ 0.93
SMARCB1-204ENST00000407422 DUSP4Q13115 394 aa20.86■□□□□ 0.93
SMARCB1-204ENST00000407422 GPR17Q13304 367 aa20.86■□□□□ 0.93
SMARCB1-204ENST00000407422 ALCAMQ13740 583 aa20.86■□□□□ 0.93
SMARCB1-204ENST00000407422 FAM84AQ96KN4 292 aa20.86■□□□□ 0.93
SMARCB1-204ENST00000407422 OXCT2Q9BYC2 517 aaPredicted RBP20.86■□□□□ 0.93
SMARCB1-204ENST00000407422 TRIM9Q9C026 710 aa20.86■□□□□ 0.93
SMARCB1-204ENST00000407422 PCIF1Q9H4Z3 704 aa20.86■□□□□ 0.93
SMARCB1-204ENST00000407422 TBC1D17Q9HA65 648 aa20.86■□□□□ 0.93
SMARCB1-204ENST00000407422 ARHGEF3Q9NR81 526 aa20.86■□□□□ 0.93
SMARCB1-204ENST00000407422 GDE1Q9NZC3 331 aa20.86■□□□□ 0.93
SMARCB1-204ENST00000407422 IL18RAPO95256 599 aa20.86■□□□□ 0.93
SMARCB1-204ENST00000407422 CDR1P51861 262 aa20.86■□□□□ 0.93
SMARCB1-204ENST00000407422 OR10T2Q8NGX3 314 aa20.86■□□□□ 0.93
SMARCB1-204ENST00000407422 ATOH1Q92858 354 aaPredicted RBP20.86■□□□□ 0.93
SMARCB1-204ENST00000407422 ZNF512Q96ME7 567 aaPredicted RBP20.86■□□□□ 0.93
SMARCB1-204ENST00000407422 SLC27A5Q9Y2P5 690 aa20.86■□□□□ 0.93
SMARCB1-204ENST00000407422 YIPF1Q9Y548 306 aa20.86■□□□□ 0.93
SMARCB1-204ENST00000407422 GARTP22102 1010 aa20.85■□□□□ 0.93
SMARCB1-204ENST00000407422 TAF6P49848 677 aa20.85■□□□□ 0.93
SMARCB1-204ENST00000407422 SCARA3Q6AZY7 606 aa20.85■□□□□ 0.93
SMARCB1-204ENST00000407422 IQCEQ6IPM2 695 aa20.85■□□□□ 0.93
SMARCB1-204ENST00000407422 PDZD4Q76G19 769 aaPredicted RBP20.85■□□□□ 0.93
SMARCB1-204ENST00000407422 BRSK2Q8IWQ3 736 aa20.85■□□□□ 0.93
SMARCB1-204ENST00000407422 ELMOD1Q8N336 334 aa20.85■□□□□ 0.93
SMARCB1-204ENST00000407422 TTC9BQ8N6N2 239 aa20.85■□□□□ 0.93
SMARCB1-204ENST00000407422 IQUBQ8NA54 791 aa20.85■□□□□ 0.93
SMARCB1-204ENST00000407422 ATAD1Q8NBU5 361 aa20.85■□□□□ 0.93
SMARCB1-204ENST00000407422 NOC3LQ8WTT2 800 aaKnown RBP20.85■□□□□ 0.93
SMARCB1-204ENST00000407422 BORCS6Q96GS4 357 aa20.85■□□□□ 0.93
SMARCB1-204ENST00000407422 RTP3Q9BQQ7 232 aa20.85■□□□□ 0.93
SMARCB1-204ENST00000407422 PYM1Q9BRP8 204 aaKnown RBP20.85■□□□□ 0.93
SMARCB1-204ENST00000407422 PLA2G2FQ9BZM2 168 aa20.85■□□□□ 0.93
SMARCB1-204ENST00000407422 CUEDC2Q9H467 287 aa20.85■□□□□ 0.93
SMARCB1-204ENST00000407422 PCDHA7Q9UN72 937 aa20.85■□□□□ 0.93
SMARCB1-204ENST00000407422 CFAP54Q96N23 3096 aa20.84■□□□□ 0.93
SMARCB1-204ENST00000407422 MTMR11A4FU01 709 aa20.84■□□□□ 0.93
SMARCB1-204ENST00000407422 CYB561D2O14569 222 aa20.84■□□□□ 0.93
SMARCB1-204ENST00000407422 MOSPD3O75425 235 aa20.84■□□□□ 0.93
SMARCB1-204ENST00000407422 CYP11A1P05108 521 aa20.84■□□□□ 0.93
SMARCB1-204ENST00000407422 PDIA4P13667 645 aaKnown RBP20.84■□□□□ 0.93
SMARCB1-204ENST00000407422 GJA1P17302 382 aa20.84■□□□□ 0.93
SMARCB1-204ENST00000407422 PAX3P23760 479 aa20.84■□□□□ 0.93
SMARCB1-204ENST00000407422 HOXD13P35453 343 aa20.84■□□□□ 0.93
SMARCB1-204ENST00000407422 TFAMQ00059 246 aaKnown RBP20.84■□□□□ 0.93
SMARCB1-204ENST00000407422 MYBPC2Q14324 1141 aa20.84■□□□□ 0.93
SMARCB1-204ENST00000407422 CYP4A22Q5TCH4 519 aa20.84■□□□□ 0.93
SMARCB1-204ENST00000407422 TANGO2Q6ICL3 276 aa20.84■□□□□ 0.93
SMARCB1-204ENST00000407422 CENPPQ6IPU0 288 aa20.84■□□□□ 0.93
SMARCB1-204ENST00000407422 KCNG4Q8TDN1 519 aa20.84■□□□□ 0.93
SMARCB1-204ENST00000407422 TMEM206Q9H813 350 aa20.84■□□□□ 0.93
SMARCB1-204ENST00000407422 RBAKQ9NYW8 714 aaPredicted RBP20.84■□□□□ 0.93
SMARCB1-204ENST00000407422 ZNF197O14709 1029 aa20.83■□□□□ 0.93
SMARCB1-204ENST00000407422 POLR2DO15514 142 aaKnown RBP20.83■□□□□ 0.93
SMARCB1-204ENST00000407422 SOAT2O75908 522 aa20.83■□□□□ 0.93
SMARCB1-204ENST00000407422 MYL4P12829 197 aa20.83■□□□□ 0.93
SMARCB1-204ENST00000407422 RFX1P22670 979 aa20.83■□□□□ 0.93
SMARCB1-204ENST00000407422 CASP1P29466 404 aa20.83■□□□□ 0.93
SMARCB1-204ENST00000407422 ASIC1P78348 528 aa20.83■□□□□ 0.93
SMARCB1-204ENST00000407422 DNM1Q05193 864 aaKnown RBP20.83■□□□□ 0.93
SMARCB1-204ENST00000407422 ARMCX5Q6P1M9 558 aa20.83■□□□□ 0.93
SMARCB1-204ENST00000407422 NT5DC4Q86YG4 428 aa20.83■□□□□ 0.93
SMARCB1-204ENST00000407422 CCDC105Q8IYK2 499 aa20.83■□□□□ 0.93
SMARCB1-204ENST00000407422 ZSWIM3Q96MP5 696 aa20.83■□□□□ 0.93
SMARCB1-204ENST00000407422 LRRC27Q9C0I9 530 aa20.83■□□□□ 0.93
SMARCB1-204ENST00000407422 DNAJC25Q9H1X3 360 aa20.83■□□□□ 0.93
SMARCB1-204ENST00000407422 EXTL3O43909 919 aa20.82■□□□□ 0.92
SMARCB1-204ENST00000407422 ECI2O75521 394 aa20.82■□□□□ 0.92
SMARCB1-204ENST00000407422 LDHAP00338 332 aaKnown RBP20.82■□□□□ 0.92
SMARCB1-204ENST00000407422 FCARP24071 287 aa20.82■□□□□ 0.92
SMARCB1-204ENST00000407422 ME1P48163 572 aa20.82■□□□□ 0.92
SMARCB1-204ENST00000407422 EPHA5P54756 1037 aa20.82■□□□□ 0.92
SMARCB1-204ENST00000407422 SNW1Q13573 536 aaKnown RBP20.82■□□□□ 0.92
SMARCB1-204ENST00000407422 FAM78AQ5JUQ0 283 aa20.82■□□□□ 0.92
SMARCB1-204ENST00000407422 WSCD1Q658N2 575 aa20.82■□□□□ 0.92
SMARCB1-204ENST00000407422 C1orf127Q8N9H9 656 aa20.82■□□□□ 0.92
SMARCB1-204ENST00000407422 IRF2BPLQ9H1B7 796 aa20.82■□□□□ 0.92
SMARCB1-204ENST00000407422 PDE11AQ9HCR9 933 aa20.82■□□□□ 0.92
SMARCB1-204ENST00000407422 ASAH2Q9NR71 780 aa20.82■□□□□ 0.92
SMARCB1-204ENST00000407422 KPNA7A9QM74 516 aa20.82■□□□□ 0.92
SMARCB1-204ENST00000407422 MICAL2O94851 1124 aa20.82■□□□□ 0.92
SMARCB1-204ENST00000407422 ITGB3P05106 788 aa20.82■□□□□ 0.92
SMARCB1-204ENST00000407422 POLR2BP30876 1174 aaKnown RBP20.82■□□□□ 0.92
SMARCB1-204ENST00000407422 AMPD3Q01432 767 aa20.82■□□□□ 0.92
SMARCB1-204ENST00000407422 PHLDB3Q6NSJ2 640 aa20.82■□□□□ 0.92
SMARCB1-204ENST00000407422 DTWD2Q8NBA8 298 aa20.82■□□□□ 0.92
SMARCB1-204ENST00000407422 C7orf25Q9BPX7 421 aa20.82■□□□□ 0.92
SMARCB1-204ENST00000407422 LRRC3Q9BY71 257 aa20.82■□□□□ 0.92
SMARCB1-204ENST00000407422 FOXQ1Q9C009 403 aa20.82■□□□□ 0.92
SMARCB1-204ENST00000407422 DSEQ9UL01 958 aa20.82■□□□□ 0.92
SMARCB1-204ENST00000407422 DCNP07585 359 aaKnown RBP20.81■□□□□ 0.92
SMARCB1-204ENST00000407422 SV2CQ496J9 727 aa20.81■□□□□ 0.92
SMARCB1-204ENST00000407422 SLC39A12Q504Y0 691 aa20.81■□□□□ 0.92
SMARCB1-204ENST00000407422 MIA3Q5JRA6 1907 aa20.81■□□□□ 0.92
SMARCB1-204ENST00000407422 RESP18Q5W5W9 173 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms