RNA–Protein interactions for RNA: ENST00000406757.2

GPC3-203, Transcript of glypican 3, humanhuman

TSL 2

Gene GPC3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-203ENST00000406757 THP07101 528 aa8.99□□□□□ -0.97
GPC3-203ENST00000406757 KCNE1P15382 129 aa8.99□□□□□ -0.97
GPC3-203ENST00000406757 PON1P27169 355 aa8.99□□□□□ -0.97
GPC3-203ENST00000406757 POLR2BP30876 1174 aaKnown RBP8.99□□□□□ -0.97
GPC3-203ENST00000406757 GTF2F1P35269 517 aaKnown RBP eCLIP8.99□□□□□ -0.976e-8■■■■■ 28.8
GPC3-203ENST00000406757 BMPR1AP36894 532 aa8.99□□□□□ -0.97
GPC3-203ENST00000406757 PIK3CAP42336 1068 aa8.99□□□□□ -0.97
GPC3-203ENST00000406757 MCCD1P59942 119 aaPredicted RBP8.99□□□□□ -0.97
GPC3-203ENST00000406757 MYL6P60660 151 aa8.99□□□□□ -0.97
GPC3-203ENST00000406757 CLDN10P78369 228 aa8.99□□□□□ -0.97
GPC3-203ENST00000406757 BTG3Q14201 252 aaPredicted RBP8.99□□□□□ -0.97
GPC3-203ENST00000406757 ZBTB6Q15916 424 aa8.99□□□□□ -0.97
GPC3-203ENST00000406757 CTC1Q2NKJ3 1217 aa8.99□□□□□ -0.97
GPC3-203ENST00000406757 ZACNQ401N2 412 aa8.99□□□□□ -0.97
GPC3-203ENST00000406757 XKR4Q5GH76 650 aa8.99□□□□□ -0.97
GPC3-203ENST00000406757 NOMO2Q5JPE7 1267 aa8.99□□□□□ -0.97
GPC3-203ENST00000406757 GBP6Q6ZN66 633 aa8.99□□□□□ -0.97
GPC3-203ENST00000406757 C15orf39Q6ZRI6 1047 aa8.99□□□□□ -0.97
GPC3-203ENST00000406757 ARHGEF19Q8IW93 802 aa8.99□□□□□ -0.97
GPC3-203ENST00000406757 ADHFE1Q8IWW8 467 aa8.99□□□□□ -0.97
GPC3-203ENST00000406757 CD302Q8IX05 232 aa8.99□□□□□ -0.97
GPC3-203ENST00000406757 CRIPAKQ8N1N5 446 aa8.99□□□□□ -0.97
GPC3-203ENST00000406757 CACTINQ8WUQ7 758 aaKnown RBP8.99□□□□□ -0.97
GPC3-203ENST00000406757 PPP1R10Q96QC0 940 aaKnown RBP8.99□□□□□ -0.97
GPC3-203ENST00000406757 PAAF1Q9BRP4 392 aa8.99□□□□□ -0.97
GPC3-203ENST00000406757 INTS2Q9H0H0 1204 aaKnown RBP8.99□□□□□ -0.97
GPC3-203ENST00000406757 IGFLR1Q9H665 355 aa8.99□□□□□ -0.97
GPC3-203ENST00000406757 RC3H2Q9HBD1 1191 aaKnown RBP8.99□□□□□ -0.97
GPC3-203ENST00000406757 ALG13Q9NP73 1137 aaKnown RBP8.99□□□□□ -0.97
GPC3-203ENST00000406757 FAM207AQ9NSI2 230 aaPredicted RBP8.99□□□□□ -0.97
GPC3-203ENST00000406757 GCNT4Q9P109 453 aa8.99□□□□□ -0.97
GPC3-203ENST00000406757 PRKAG3Q9UGI9 489 aa8.99□□□□□ -0.97
GPC3-203ENST00000406757 SIX4Q9UIU6 781 aa8.99□□□□□ -0.97
GPC3-203ENST00000406757 AJAP1Q9UKB5 411 aaPredicted RBP8.99□□□□□ -0.97
GPC3-203ENST00000406757 NLRC5Q86WI3 1866 aa8.99□□□□□ -0.97
GPC3-203ENST00000406757 BRWD1Q9NSI6 2320 aa8.99□□□□□ -0.97
GPC3-203ENST00000406757 CITO14578 2027 aa8.98□□□□□ -0.97
GPC3-203ENST00000406757 F8W810 466 aa8.98□□□□□ -0.97
GPC3-203ENST00000406757 NCK2O43639 380 aa8.98□□□□□ -0.97
GPC3-203ENST00000406757 TBX10O75333 385 aa8.98□□□□□ -0.97
GPC3-203ENST00000406757 DGKIO75912 1065 aa8.98□□□□□ -0.97
GPC3-203ENST00000406757 GTF2H1P32780 548 aa8.98□□□□□ -0.97
GPC3-203ENST00000406757 IRS1P35568 1242 aa8.98□□□□□ -0.97
GPC3-203ENST00000406757 PBX1P40424 430 aa8.98□□□□□ -0.97
GPC3-203ENST00000406757 PBX3P40426 434 aa8.98□□□□□ -0.97
GPC3-203ENST00000406757 CLCNKBP51801 687 aa8.98□□□□□ -0.97
GPC3-203ENST00000406757 TRPC3Q13507 836 aa8.98□□□□□ -0.97
GPC3-203ENST00000406757 NCOA4Q13772 614 aa8.98□□□□□ -0.97
GPC3-203ENST00000406757 HSP90AA2PQ14568 343 aaPredicted RBP8.98□□□□□ -0.97
GPC3-203ENST00000406757 NAB2Q15742 525 aa8.98□□□□□ -0.97
GPC3-203ENST00000406757 EXOC3L4Q17RC7 722 aa8.98□□□□□ -0.97
GPC3-203ENST00000406757 DPY19L2P1Q6NXN4 242 aa8.98□□□□□ -0.97
GPC3-203ENST00000406757 GLB1LQ6UWU2 654 aa8.98□□□□□ -0.97
GPC3-203ENST00000406757 RRAGAQ7L523 313 aa8.98□□□□□ -0.97
GPC3-203ENST00000406757 USP37Q86T82 979 aa8.98□□□□□ -0.97
GPC3-203ENST00000406757 NPAS4Q8IUM7 802 aa8.98□□□□□ -0.97
GPC3-203ENST00000406757 VSTM4Q8IW00 320 aa8.98□□□□□ -0.97
GPC3-203ENST00000406757 ABI1Q8IZP0 508 aa8.98□□□□□ -0.97
GPC3-203ENST00000406757 BEST2Q8NFU1 509 aa8.98□□□□□ -0.97
GPC3-203ENST00000406757 LMO3Q8TAP4 145 aa8.98□□□□□ -0.97
GPC3-203ENST00000406757 CXorf38Q8TB03 319 aa8.98□□□□□ -0.97
GPC3-203ENST00000406757 HASPINQ8TF76 798 aa8.98□□□□□ -0.97
GPC3-203ENST00000406757 PTCD2Q8WV60 388 aaKnown RBP8.98□□□□□ -0.97
GPC3-203ENST00000406757 CLP1Q92989 425 aaKnown RBP8.98□□□□□ -0.97
GPC3-203ENST00000406757 KAT5Q92993 513 aa8.98□□□□□ -0.97
GPC3-203ENST00000406757 ZNF689Q96CS4 500 aaPredicted RBP8.98□□□□□ -0.97
GPC3-203ENST00000406757 LMAN2LQ9H0V9 348 aa8.98□□□□□ -0.97
GPC3-203ENST00000406757 ELAC1Q9H777 363 aaKnown RBP8.98□□□□□ -0.97
GPC3-203ENST00000406757 APOBEC3GQ9HC16 384 aaKnown RBP8.98□□□□□ -0.97
GPC3-203ENST00000406757 SIX2Q9NPC8 291 aa8.98□□□□□ -0.97
GPC3-203ENST00000406757 UBN1Q9NPG3 1134 aa8.98□□□□□ -0.97
GPC3-203ENST00000406757 TBC1D13Q9NVG8 400 aa8.98□□□□□ -0.97
GPC3-203ENST00000406757 RAB20Q9NX57 234 aa8.98□□□□□ -0.97
GPC3-203ENST00000406757 DNAJB4Q9UDY4 337 aa8.98□□□□□ -0.97
GPC3-203ENST00000406757 MUTYHQ9UIF7 546 aa8.98□□□□□ -0.97
GPC3-203ENST00000406757 UBQLN1Q9UMX0 589 aaKnown RBP8.98□□□□□ -0.97
GPC3-203ENST00000406757 POLIQ9UNA4 740 aa8.98□□□□□ -0.97
GPC3-203ENST00000406757 SIK3Q9Y2K2 1263 aa8.98□□□□□ -0.97
GPC3-203ENST00000406757 RWDD3Q9Y3V2 267 aa8.98□□□□□ -0.97
GPC3-203ENST00000406757 C2CD2Q9Y426 696 aa8.98□□□□□ -0.97
GPC3-203ENST00000406757 MRPL42Q9Y6G3 142 aaKnown RBP8.98□□□□□ -0.97
GPC3-203ENST00000406757 RALGAPA2Q2PPJ7 1873 aa8.98□□□□□ -0.97
GPC3-203ENST00000406757 NT5C1B-RDH14C9J2C7 533 aa8.97□□□□□ -0.97
GPC3-203ENST00000406757 TK2O00142 265 aa8.97□□□□□ -0.97
GPC3-203ENST00000406757 MBTPS2O43462 519 aa8.97□□□□□ -0.97
GPC3-203ENST00000406757 N4BP1O75113 896 aaKnown RBP8.97□□□□□ -0.97
GPC3-203ENST00000406757 NOL4O94818 638 aa8.97□□□□□ -0.97
GPC3-203ENST00000406757 DNAJB1P25685 340 aa8.97□□□□□ -0.97
GPC3-203ENST00000406757 RAP1GAPP47736 663 aa8.97□□□□□ -0.97
GPC3-203ENST00000406757 OR1G1P47890 313 aa8.97□□□□□ -0.97
GPC3-203ENST00000406757 RBP5P82980 135 aa8.97□□□□□ -0.97
GPC3-203ENST00000406757 POU5F1Q01860 360 aaKnown RBP8.97□□□□□ -0.97
GPC3-203ENST00000406757 RNASELQ05823 741 aaKnown RBP8.97□□□□□ -0.97
GPC3-203ENST00000406757 CAMK1Q14012 370 aa8.97□□□□□ -0.97
GPC3-203ENST00000406757 ARID5BQ14865 1188 aa8.97□□□□□ -0.97
GPC3-203ENST00000406757 SMAD2Q15796 467 aaKnown RBP8.97□□□□□ -0.97
GPC3-203ENST00000406757 ARHGAP44Q17R89 818 aa8.97□□□□□ -0.97
GPC3-203ENST00000406757 KLHDC7AQ5VTJ3 777 aa8.97□□□□□ -0.97
GPC3-203ENST00000406757 C9orf57Q5W0N0 161 aa8.97□□□□□ -0.97
GPC3-203ENST00000406757 IQCEQ6IPM2 695 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms