RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 MAGEC3Q8TD91 643 aa10.44□□□□□ -0.74
MSH2-202ENST00000406134 MGARPQ8TDB4 240 aa10.44□□□□□ -0.74
MSH2-202ENST00000406134 FAM81BQ96LP2 452 aa10.44□□□□□ -0.74
MSH2-202ENST00000406134 C9orf72Q96LT7 481 aa10.44□□□□□ -0.74
MSH2-202ENST00000406134 CCDC114Q96M63 670 aa10.44□□□□□ -0.74
MSH2-202ENST00000406134 RBAKQ9NYW8 714 aaPredicted RBP10.44□□□□□ -0.74
MSH2-202ENST00000406134 RALGAPA2Q2PPJ7 1873 aa10.44□□□□□ -0.74
MSH2-202ENST00000406134 GSTTP1A0A1W2PQM5 241 aa10.44□□□□□ -0.74
MSH2-202ENST00000406134 F8VP50 259 aa10.44□□□□□ -0.74
MSH2-202ENST00000406134 ZBED4O75132 1171 aa10.44□□□□□ -0.74
MSH2-202ENST00000406134 ATP2C2O75185 946 aa10.44□□□□□ -0.74
MSH2-202ENST00000406134 TAC1P20366 129 aa10.44□□□□□ -0.74
MSH2-202ENST00000406134 ICAM3P32942 547 aa10.44□□□□□ -0.74
MSH2-202ENST00000406134 NF2P35240 595 aa10.44□□□□□ -0.74
MSH2-202ENST00000406134 NSFP46459 744 aaKnown RBP10.44□□□□□ -0.74
MSH2-202ENST00000406134 HMGCS2P54868 508 aa10.44□□□□□ -0.74
MSH2-202ENST00000406134 CALCOCO2Q13137 446 aa10.44□□□□□ -0.74
MSH2-202ENST00000406134 IZUMO3Q5VZ72 239 aa10.44□□□□□ -0.74
MSH2-202ENST00000406134 DRICH1Q6PGQ1 229 aaPredicted RBP10.44□□□□□ -0.74
MSH2-202ENST00000406134 TAX1BP1Q86VP1 789 aa10.44□□□□□ -0.74
MSH2-202ENST00000406134 RHOT1Q8IXI2 618 aa10.44□□□□□ -0.74
MSH2-202ENST00000406134 SCYL3Q8IZE3 742 aa10.44□□□□□ -0.74
MSH2-202ENST00000406134 ZNF276Q8N554 614 aa10.44□□□□□ -0.74
MSH2-202ENST00000406134 TFAP2BQ92481 460 aa10.44□□□□□ -0.74
MSH2-202ENST00000406134 KIF9Q9HAQ2 790 aa10.44□□□□□ -0.74
MSH2-202ENST00000406134 MCM8Q9UJA3 840 aa10.44□□□□□ -0.74
MSH2-202ENST00000406134 IVNS1ABPQ9Y6Y0 642 aa10.44□□□□□ -0.74
MSH2-202ENST00000406134 SBF1O95248 1867 aa10.44□□□□□ -0.74
MSH2-202ENST00000406134 SPDYE16A6NNV3 312 aaPredicted RBP10.44□□□□□ -0.74
MSH2-202ENST00000406134 PI4K2BG5E9Z4 385 aa10.44□□□□□ -0.74
MSH2-202ENST00000406134 MSCO60682 206 aa10.44□□□□□ -0.74
MSH2-202ENST00000406134 ATP6V1G2O95670 118 aa10.44□□□□□ -0.74
MSH2-202ENST00000406134 OATP04181 439 aa10.44□□□□□ -0.74
MSH2-202ENST00000406134 PTPN7P35236 360 aa10.44□□□□□ -0.74
MSH2-202ENST00000406134 NAMPTP43490 491 aa10.44□□□□□ -0.74
MSH2-202ENST00000406134 BNIP1Q12981 228 aa10.44□□□□□ -0.74
MSH2-202ENST00000406134 CIAPIN1Q6FI81 312 aa10.44□□□□□ -0.74
MSH2-202ENST00000406134 CATSPERGQ6ZRH7 1159 aa10.44□□□□□ -0.74
MSH2-202ENST00000406134 ALLCQ8N6M5 410 aa10.44□□□□□ -0.74
MSH2-202ENST00000406134 NSUN6Q8TEA1 469 aaKnown RBP10.44□□□□□ -0.74
MSH2-202ENST00000406134 MZB1Q8WU39 189 aa10.44□□□□□ -0.74
MSH2-202ENST00000406134 ZNF606Q8WXB4 792 aa10.44□□□□□ -0.74
MSH2-202ENST00000406134 SPOCK2Q92563 424 aa10.44□□□□□ -0.74
MSH2-202ENST00000406134 ACSF2Q96CM8 615 aaPredicted RBP10.44□□□□□ -0.74
MSH2-202ENST00000406134 ANAPC5Q9UJX4 755 aa10.44□□□□□ -0.74
MSH2-202ENST00000406134 FARP1Q9Y4F1 1045 aaPredicted RBP10.44□□□□□ -0.74
MSH2-202ENST00000406134 AFG3L2Q9Y4W6 797 aa10.44□□□□□ -0.74
MSH2-202ENST00000406134 CD2APQ9Y5K6 639 aa10.44□□□□□ -0.74
MSH2-202ENST00000406134 BANF1O75531 89 aa10.43□□□□□ -0.74
MSH2-202ENST00000406134 ASMTLO95671 621 aa10.43□□□□□ -0.74
MSH2-202ENST00000406134 ASS1P00966 412 aaKnown RBP10.43□□□□□ -0.74
MSH2-202ENST00000406134 ABHD2P08910 425 aa10.43□□□□□ -0.74
MSH2-202ENST00000406134 ATF2P15336 505 aa10.43□□□□□ -0.74
MSH2-202ENST00000406134 CDH5P33151 784 aaPredicted RBP10.43□□□□□ -0.74
MSH2-202ENST00000406134 LIG4P49917 911 aa10.43□□□□□ -0.74
MSH2-202ENST00000406134 CNTN2Q02246 1040 aa10.43□□□□□ -0.74
MSH2-202ENST00000406134 NFX1Q12986 1120 aaKnown RBP10.43□□□□□ -0.74
MSH2-202ENST00000406134 P3H1Q32P28 736 aa10.43□□□□□ -0.74
MSH2-202ENST00000406134 XKR3Q5GH77 459 aa10.43□□□□□ -0.74
MSH2-202ENST00000406134 RNASEH2BQ5TBB1 312 aaKnown RBP10.43□□□□□ -0.74
MSH2-202ENST00000406134 FEZF2Q8TBJ5 459 aa10.43□□□□□ -0.74
MSH2-202ENST00000406134 TRIM11Q96F44 468 aa10.43□□□□□ -0.74
MSH2-202ENST00000406134 XYLT2Q9H1B5 865 aa10.43□□□□□ -0.74
MSH2-202ENST00000406134 ADAM22Q9P0K1 906 aa10.43□□□□□ -0.74
MSH2-202ENST00000406134 CDKN2BP42772 138 aa10.43□□□□□ -0.74
MSH2-202ENST00000406134 GPX6P59796 221 aa10.43□□□□□ -0.74
MSH2-202ENST00000406134 SLC25A11Q02978 314 aaKnown RBP10.43□□□□□ -0.74
MSH2-202ENST00000406134 TAZQ16635 292 aa10.43□□□□□ -0.74
MSH2-202ENST00000406134 TLDC1Q6P9B6 456 aa10.43□□□□□ -0.74
MSH2-202ENST00000406134 CROCCP2Q86T23 111 aa10.43□□□□□ -0.74
MSH2-202ENST00000406134 HOMEZQ8IX15 550 aa10.43□□□□□ -0.74
MSH2-202ENST00000406134 ZNF280CQ8ND82 737 aa10.43□□□□□ -0.74
MSH2-202ENST00000406134 GDAP1Q8TB36 358 aa10.43□□□□□ -0.74
MSH2-202ENST00000406134 UTP4Q969X6 686 aaKnown RBP10.43□□□□□ -0.74
MSH2-202ENST00000406134 USP15Q9Y4E8 981 aaPredicted RBP10.43□□□□□ -0.74
MSH2-202ENST00000406134 CLUHO75153 1309 aa10.43□□□□□ -0.74
MSH2-202ENST00000406134 hCG_1818297A0A087WSY0 165 aa10.43□□□□□ -0.74
MSH2-202ENST00000406134 A8MUI8 341 aa10.43□□□□□ -0.74
MSH2-202ENST00000406134 DNALI1O14645 258 aaPredicted RBP10.43□□□□□ -0.74
MSH2-202ENST00000406134 TLR3O15455 904 aaKnown RBP10.43□□□□□ -0.74
MSH2-202ENST00000406134 TNNI1P19237 187 aa10.43□□□□□ -0.74
MSH2-202ENST00000406134 ASPAP45381 313 aa10.43□□□□□ -0.74
MSH2-202ENST00000406134 PSEN1P49768 467 aa10.43□□□□□ -0.74
MSH2-202ENST00000406134 GDF10P55107 478 aa10.43□□□□□ -0.74
MSH2-202ENST00000406134 CAV1Q03135 178 aa10.43□□□□□ -0.74
MSH2-202ENST00000406134 FAM133BQ5BKY9 247 aaKnown RBP10.43□□□□□ -0.74
MSH2-202ENST00000406134 TAOK1Q7L7X3 1001 aa10.43□□□□□ -0.74
MSH2-202ENST00000406134 TRABD2AQ86V40 505 aa10.43□□□□□ -0.74
MSH2-202ENST00000406134 ECHDC2Q86YB7 292 aa10.43□□□□□ -0.74
MSH2-202ENST00000406134 CXorf38Q8TB03 319 aa10.43□□□□□ -0.74
MSH2-202ENST00000406134 BICD1Q96G01 975 aa10.43□□□□□ -0.74
MSH2-202ENST00000406134 YY1AP1Q9H869 796 aa10.43□□□□□ -0.74
MSH2-202ENST00000406134 KIAA1586Q9HCI6 787 aa10.43□□□□□ -0.74
MSH2-202ENST00000406134 RGS17Q9UGC6 210 aaPredicted RBP10.43□□□□□ -0.74
MSH2-202ENST00000406134 TBK1Q9UHD2 729 aa10.43□□□□□ -0.74
MSH2-202ENST00000406134 TRIM33Q9UPN9 1127 aa10.43□□□□□ -0.74
MSH2-202ENST00000406134 PCDHB4Q9Y5E5 795 aa10.43□□□□□ -0.74
MSH2-202ENST00000406134 H0YHG0 523 aa10.42□□□□□ -0.74
MSH2-202ENST00000406134 FARP2O94887 1054 aaPredicted RBP10.42□□□□□ -0.74
MSH2-202ENST00000406134 IL1R2P27930 398 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms