RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 DLATP10515 647 aaKnown RBP11.39□□□□□ -0.59
RPAIN-204ENST00000405578 TNNI1P19237 187 aa11.39□□□□□ -0.59
RPAIN-204ENST00000405578 RPL9P32969 192 aaKnown RBP11.39□□□□□ -0.59
RPAIN-204ENST00000405578 PBX3P40426 434 aa11.39□□□□□ -0.59
RPAIN-204ENST00000405578 OR1G1P47890 313 aa11.39□□□□□ -0.59
RPAIN-204ENST00000405578 AFF1P51825 1210 aaKnown RBP11.39□□□□□ -0.59
RPAIN-204ENST00000405578 BCAR1P56945 870 aa11.39□□□□□ -0.59
RPAIN-204ENST00000405578 TFAMQ00059 246 aaKnown RBP11.39□□□□□ -0.59
RPAIN-204ENST00000405578 KRT17Q04695 432 aa11.39□□□□□ -0.59
RPAIN-204ENST00000405578 ENPEPQ07075 957 aa11.39□□□□□ -0.59
RPAIN-204ENST00000405578 CYP24A1Q07973 514 aa11.39□□□□□ -0.59
RPAIN-204ENST00000405578 RSPO4Q2I0M5 234 aaPredicted RBP11.39□□□□□ -0.59
RPAIN-204ENST00000405578 ZSCAN23Q3MJ62 389 aa11.39□□□□□ -0.59
RPAIN-204ENST00000405578 CCDC40Q4G0X9 1142 aa11.39□□□□□ -0.59
RPAIN-204ENST00000405578 JADE1Q6IE81 842 aa11.39□□□□□ -0.59
RPAIN-204ENST00000405578 KIAA1841Q6NSI8 718 aa11.39□□□□□ -0.59
RPAIN-204ENST00000405578 KCNT2Q6UVM3 1135 aa11.39□□□□□ -0.59
RPAIN-204ENST00000405578 TMC7Q7Z402 723 aa11.39□□□□□ -0.59
RPAIN-204ENST00000405578 FILIP1Q7Z7B0 1213 aa11.39□□□□□ -0.59
RPAIN-204ENST00000405578 WDR49Q8IV35 697 aa11.39□□□□□ -0.59
RPAIN-204ENST00000405578 PLCD3Q8N3E9 789 aa11.39□□□□□ -0.59
RPAIN-204ENST00000405578 GSTCDQ8NEC7 633 aa11.39□□□□□ -0.59
RPAIN-204ENST00000405578 PPP1R10Q96QC0 940 aaKnown RBP11.39□□□□□ -0.59
RPAIN-204ENST00000405578 SPG21Q9NZD8 308 aa11.39□□□□□ -0.59
RPAIN-204ENST00000405578 MAGEC2Q9UBF1 373 aaPredicted RBP11.39□□□□□ -0.59
RPAIN-204ENST00000405578 ARMCX3Q9UH62 379 aaPredicted RBP11.39□□□□□ -0.59
RPAIN-204ENST00000405578 USP24Q9UPU5 2620 aa11.39□□□□□ -0.59
RPAIN-204ENST00000405578 FAN1Q9Y2M0 1017 aa11.39□□□□□ -0.59
RPAIN-204ENST00000405578 PATJQ8NI35 1801 aa11.38□□□□□ -0.59
RPAIN-204ENST00000405578 TRAPPC3O43617 180 aa11.38□□□□□ -0.59
RPAIN-204ENST00000405578 CLASP2O75122 1294 aaKnown RBP11.38□□□□□ -0.59
RPAIN-204ENST00000405578 TADA2AO75478 443 aa11.38□□□□□ -0.59
RPAIN-204ENST00000405578 DDHD2O94830 711 aa11.38□□□□□ -0.59
RPAIN-204ENST00000405578 GALTP07902 379 aa11.38□□□□□ -0.59
RPAIN-204ENST00000405578 PAX3P23760 479 aa11.38□□□□□ -0.59
RPAIN-204ENST00000405578 CA8P35219 290 aa11.38□□□□□ -0.59
RPAIN-204ENST00000405578 CASP4P49662 377 aa11.38□□□□□ -0.59
RPAIN-204ENST00000405578 PMS1P54277 932 aaKnown RBP11.38□□□□□ -0.59
RPAIN-204ENST00000405578 SPAG1Q07617 926 aa11.38□□□□□ -0.59
RPAIN-204ENST00000405578 DSC1Q08554 894 aa11.38□□□□□ -0.59
RPAIN-204ENST00000405578 TDGQ13569 410 aa11.38□□□□□ -0.59
RPAIN-204ENST00000405578 SMC1AQ14683 1233 aaKnown RBP11.38□□□□□ -0.59
RPAIN-204ENST00000405578 BMS1Q14692 1282 aaKnown RBP11.38□□□□□ -0.59
RPAIN-204ENST00000405578 LRRC55Q6ZSA7 311 aa11.38□□□□□ -0.59
RPAIN-204ENST00000405578 ZNF280BQ86YH2 543 aa11.38□□□□□ -0.59
RPAIN-204ENST00000405578 ZC3H3Q8IXZ2 948 aaKnown RBP11.38□□□□□ -0.59
RPAIN-204ENST00000405578 COLGALT2Q8IYK4 626 aa11.38□□□□□ -0.59
RPAIN-204ENST00000405578 TMC2Q8TDI7 906 aa11.38□□□□□ -0.59
RPAIN-204ENST00000405578 RUBCNQ92622 972 aa11.38□□□□□ -0.59
RPAIN-204ENST00000405578 EEF2KMTQ96G04 330 aa11.38□□□□□ -0.59
RPAIN-204ENST00000405578 TMEM169Q96HH4 297 aa11.38□□□□□ -0.59
RPAIN-204ENST00000405578 ZMAT2Q96NC0 199 aaKnown RBP11.38□□□□□ -0.59
RPAIN-204ENST00000405578 CGRRF1Q99675 332 aa11.38□□□□□ -0.59
RPAIN-204ENST00000405578 SRRTQ9BXP5 876 aaKnown RBP11.38□□□□□ -0.59
RPAIN-204ENST00000405578 NRDE2Q9H7Z3 1164 aa11.38□□□□□ -0.59
RPAIN-204ENST00000405578 PDE11AQ9HCR9 933 aa11.38□□□□□ -0.59
RPAIN-204ENST00000405578 MIOSQ9NXC5 875 aa11.38□□□□□ -0.59
RPAIN-204ENST00000405578 DUSP12Q9UNI6 340 aa11.38□□□□□ -0.59
RPAIN-204ENST00000405578 USTQ9Y2C2 406 aa11.38□□□□□ -0.59
RPAIN-204ENST00000405578 DOCK8Q8NF50 2099 aa11.38□□□□□ -0.59
RPAIN-204ENST00000405578 GPR179Q6PRD1 2367 aa11.38□□□□□ -0.59
RPAIN-204ENST00000405578 CFAP47Q6ZTR5 3102 aa11.38□□□□□ -0.59
RPAIN-204ENST00000405578 C2orf71A6NGG8 1288 aa11.37□□□□□ -0.59
RPAIN-204ENST00000405578 CASTOR2A6NHX0 329 aa11.37□□□□□ -0.59
RPAIN-204ENST00000405578 SMTNL1A8MU46 457 aa11.37□□□□□ -0.59
RPAIN-204ENST00000405578 BECN2A8MW95 431 aa11.37□□□□□ -0.59
RPAIN-204ENST00000405578 STK25O00506 426 aa11.37□□□□□ -0.59
RPAIN-204ENST00000405578 NRP1O14786 923 aa11.37□□□□□ -0.59
RPAIN-204ENST00000405578 IKBKBO14920 756 aa11.37□□□□□ -0.59
RPAIN-204ENST00000405578 PHACTR2O75167 634 aa11.37□□□□□ -0.59
RPAIN-204ENST00000405578 B3GAT3O94766 335 aa11.37□□□□□ -0.59
RPAIN-204ENST00000405578 NFICP08651 508 aa11.37□□□□□ -0.59
RPAIN-204ENST00000405578 RFX1P22670 979 aa11.37□□□□□ -0.59
RPAIN-204ENST00000405578 VAMP7P51809 220 aa11.37□□□□□ -0.59
RPAIN-204ENST00000405578 TPM4P67936 248 aa11.37□□□□□ -0.59
RPAIN-204ENST00000405578 MYL5Q02045 173 aa11.37□□□□□ -0.59
RPAIN-204ENST00000405578 ELAVL2Q12926 359 aaKnown RBP11.37□□□□□ -0.59
RPAIN-204ENST00000405578 BFSP1Q12934 665 aa11.37□□□□□ -0.59
RPAIN-204ENST00000405578 ZBTB6Q15916 424 aa11.37□□□□□ -0.59
RPAIN-204ENST00000405578 ST3GAL2Q16842 350 aa11.37□□□□□ -0.59
RPAIN-204ENST00000405578 ANO6Q4KMQ2 910 aa11.37□□□□□ -0.59
RPAIN-204ENST00000405578 ATAT1Q5SQI0 421 aa11.37□□□□□ -0.59
RPAIN-204ENST00000405578 TCERG1LQ5VWI1 586 aa11.37□□□□□ -0.59
RPAIN-204ENST00000405578 SPATA1Q5VX52 437 aa11.37□□□□□ -0.59
RPAIN-204ENST00000405578 DCLRE1AQ6PJP8 1040 aa11.37□□□□□ -0.59
RPAIN-204ENST00000405578 CREBRFQ8IUR6 639 aa11.37□□□□□ -0.59
RPAIN-204ENST00000405578 ZSWIM2Q8NEG5 633 aa11.37□□□□□ -0.59
RPAIN-204ENST00000405578 ANKRD20A12PQ8NF67 263 aa11.37□□□□□ -0.59
RPAIN-204ENST00000405578 FEZF2Q8TBJ5 459 aa11.37□□□□□ -0.59
RPAIN-204ENST00000405578 ENOX1Q8TC92 643 aaKnown RBP11.37□□□□□ -0.59
RPAIN-204ENST00000405578 PARD3BQ8TEW8 1205 aa11.37□□□□□ -0.59
RPAIN-204ENST00000405578 C18orf25Q96B23 403 aaPredicted RBP11.37□□□□□ -0.59
RPAIN-204ENST00000405578 DUSP9Q99956 384 aaKnown RBP11.37□□□□□ -0.59
RPAIN-204ENST00000405578 DNAJC25Q9H1X3 360 aa11.37□□□□□ -0.59
RPAIN-204ENST00000405578 THAP9Q9H5L6 903 aa11.37□□□□□ -0.59
RPAIN-204ENST00000405578 INTS13Q9NVM9 706 aa11.37□□□□□ -0.59
RPAIN-204ENST00000405578 DPP3Q9NY33 737 aa11.37□□□□□ -0.59
RPAIN-204ENST00000405578 DNAJB4Q9UDY4 337 aa11.37□□□□□ -0.59
RPAIN-204ENST00000405578 ITGA11Q9UKX5 1188 aa11.37□□□□□ -0.59
RPAIN-204ENST00000405578 PRG3Q9Y2Y8 225 aaPredicted RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms