RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 CHRNB2P17787 502 aa3.96□□□□□ -1.78
RTN4-208ENST00000404909 IGFBP6P24592 240 aaPredicted RBP3.96□□□□□ -1.78
RTN4-208ENST00000404909 BRD2P25440 801 aaKnown RBP3.96□□□□□ -1.78
RTN4-208ENST00000404909 NOP2P46087 812 aaKnown RBP3.96□□□□□ -1.78
RTN4-208ENST00000404909 CLCNKBP51801 687 aa3.96□□□□□ -1.78
RTN4-208ENST00000404909 YWHAEP62258 255 aaKnown RBP3.96□□□□□ -1.78
RTN4-208ENST00000404909 ETF1P62495 437 aaKnown RBP3.96□□□□□ -1.78
RTN4-208ENST00000404909 FMO1Q01740 532 aa3.96□□□□□ -1.78
RTN4-208ENST00000404909 GPNMBQ14956 572 aa3.96□□□□□ -1.78
RTN4-208ENST00000404909 LRRC26Q2I0M4 334 aa3.96□□□□□ -1.78
RTN4-208ENST00000404909 XKR4Q5GH76 650 aa3.96□□□□□ -1.78
RTN4-208ENST00000404909 GLB1LQ6UWU2 654 aa3.96□□□□□ -1.78
RTN4-208ENST00000404909 NECAB2Q7Z6G3 386 aa3.96□□□□□ -1.78
RTN4-208ENST00000404909 PHLDB2Q86SQ0 1253 aa3.96□□□□□ -1.78
RTN4-208ENST00000404909 OR6B3Q8NGW1 331 aa3.96□□□□□ -1.78
RTN4-208ENST00000404909 HASPINQ8TF76 798 aa3.96□□□□□ -1.78
RTN4-208ENST00000404909 LINC01599Q8WXQ3 324 aa3.96□□□□□ -1.78
RTN4-208ENST00000404909 CPA5Q8WXQ8 436 aa3.96□□□□□ -1.78
RTN4-208ENST00000404909 SECISBP2LQ93073 1101 aaKnown RBP3.96□□□□□ -1.78
RTN4-208ENST00000404909 PPP1R10Q96QC0 940 aaKnown RBP3.96□□□□□ -1.78
RTN4-208ENST00000404909 PAAF1Q9BRP4 392 aa3.96□□□□□ -1.78
RTN4-208ENST00000404909 FTHL17Q9BXU8 183 aa3.96□□□□□ -1.78
RTN4-208ENST00000404909 TSGA10Q9BZW7 698 aa3.96□□□□□ -1.78
RTN4-208ENST00000404909 MCOLN1Q9GZU1 580 aa3.96□□□□□ -1.78
RTN4-208ENST00000404909 WNT8AQ9H1J5 351 aa3.96□□□□□ -1.78
RTN4-208ENST00000404909 TSPYL2Q9H2G4 693 aaPredicted RBP3.96□□□□□ -1.78
RTN4-208ENST00000404909 RGS18Q9NS28 235 aa3.96□□□□□ -1.78
RTN4-208ENST00000404909 ANK1P16157 1881 aa3.96□□□□□ -1.78
RTN4-208ENST00000404909 C9IYK1 514 aa3.96□□□□□ -1.78
RTN4-208ENST00000404909 KIF2AO00139 706 aaPredicted RBP3.96□□□□□ -1.78
RTN4-208ENST00000404909 B3GAT3O94766 335 aa3.96□□□□□ -1.78
RTN4-208ENST00000404909 UPP2O95045 317 aa3.96□□□□□ -1.78
RTN4-208ENST00000404909 MOCS3O95396 460 aa3.96□□□□□ -1.78
RTN4-208ENST00000404909 CLTBP09497 229 aa3.96□□□□□ -1.78
RTN4-208ENST00000404909 PDGFRBP09619 1106 aa3.96□□□□□ -1.78
RTN4-208ENST00000404909 H2AFZP0C0S5 128 aa3.96□□□□□ -1.78
RTN4-208ENST00000404909 COL6A1P12109 1028 aa3.96□□□□□ -1.78
RTN4-208ENST00000404909 CASQ1P31415 396 aa3.96□□□□□ -1.78
RTN4-208ENST00000404909 TAF6P49848 677 aa3.96□□□□□ -1.78
RTN4-208ENST00000404909 NDST1P52848 882 aa3.96□□□□□ -1.78
RTN4-208ENST00000404909 GALCP54803 685 aa3.96□□□□□ -1.78
RTN4-208ENST00000404909 LILRA4P59901 499 aa3.96□□□□□ -1.78
RTN4-208ENST00000404909 RNASELQ05823 741 aaKnown RBP3.96□□□□□ -1.78
RTN4-208ENST00000404909 PTPROQ16827 1216 aa3.96□□□□□ -1.78
RTN4-208ENST00000404909 C2CD6Q53TS8 623 aa3.96□□□□□ -1.78
RTN4-208ENST00000404909 PLEKHG4Q58EX7 1191 aa3.96□□□□□ -1.78
RTN4-208ENST00000404909 NAA35Q5VZE5 725 aa3.96□□□□□ -1.78
RTN4-208ENST00000404909 H2AFVQ71UI9 128 aa3.96□□□□□ -1.78
RTN4-208ENST00000404909 MRPL10Q7Z7H8 261 aaKnown RBP3.96□□□□□ -1.78
RTN4-208ENST00000404909 ABI1Q8IZP0 508 aa3.96□□□□□ -1.78
RTN4-208ENST00000404909 SLC35F6Q8N357 371 aa3.96□□□□□ -1.78
RTN4-208ENST00000404909 TXLNBQ8N3L3 684 aa3.96□□□□□ -1.78
RTN4-208ENST00000404909 LRRC52Q8N7C0 313 aa3.96□□□□□ -1.78
RTN4-208ENST00000404909 KIF18AQ8NI77 898 aa3.96□□□□□ -1.78
RTN4-208ENST00000404909 ZNF606Q8WXB4 792 aa3.96□□□□□ -1.78
RTN4-208ENST00000404909 CTNNBL1Q8WYA6 563 aaPredicted RBP3.96□□□□□ -1.78
RTN4-208ENST00000404909 DDX1Q92499 740 aaKnown RBP3.96□□□□□ -1.78
RTN4-208ENST00000404909 CYFIP2Q96F07 1278 aa3.96□□□□□ -1.78
RTN4-208ENST00000404909 HEXIM2Q96MH2 286 aaKnown RBP3.96□□□□□ -1.78
RTN4-208ENST00000404909 ZNF560Q96MR9 790 aa3.96□□□□□ -1.78
RTN4-208ENST00000404909 TOX2Q96NM4 488 aa3.96□□□□□ -1.78
RTN4-208ENST00000404909 TWNKQ96RR1 684 aa3.96□□□□□ -1.78
RTN4-208ENST00000404909 MRPL45Q9BRJ2 306 aaKnown RBP3.96□□□□□ -1.78
RTN4-208ENST00000404909 SYT11Q9BT88 431 aa3.96□□□□□ -1.78
RTN4-208ENST00000404909 TRAIPQ9BWF2 469 aa3.96□□□□□ -1.78
RTN4-208ENST00000404909 BCO2Q9BYV7 579 aa3.96□□□□□ -1.78
RTN4-208ENST00000404909 MYO1AQ9UBC5 1043 aa3.96□□□□□ -1.78
RTN4-208ENST00000404909 SALL4Q9UJQ4 1053 aa3.96□□□□□ -1.78
RTN4-208ENST00000404909 LRFN2Q9ULH4 789 aa3.96□□□□□ -1.78
RTN4-208ENST00000404909 ANO9A1A5B4 782 aa3.95□□□□□ -1.78
RTN4-208ENST00000404909 PODXLO00592 558 aa3.95□□□□□ -1.78
RTN4-208ENST00000404909 PIRO00625 290 aa3.95□□□□□ -1.78
RTN4-208ENST00000404909 ENPP3O14638 875 aa3.95□□□□□ -1.78
RTN4-208ENST00000404909 ENC1O14682 589 aa3.95□□□□□ -1.78
RTN4-208ENST00000404909 ATMINO43313 823 aaPredicted RBP3.95□□□□□ -1.78
RTN4-208ENST00000404909 HUS1O60921 280 aa3.95□□□□□ -1.78
RTN4-208ENST00000404909 CILPO75339 1184 aa3.95□□□□□ -1.78
RTN4-208ENST00000404909 EN2P19622 333 aaPredicted RBP3.95□□□□□ -1.78
RTN4-208ENST00000404909 CYP3A5P20815 502 aa3.95□□□□□ -1.78
RTN4-208ENST00000404909 ANXA13P27216 316 aa3.95□□□□□ -1.78
RTN4-208ENST00000404909 PNPLA4P41247 253 aa3.95□□□□□ -1.78
RTN4-208ENST00000404909 DNA2P51530 1060 aa3.95□□□□□ -1.78
RTN4-208ENST00000404909 SOWAHAQ2M3V2 549 aa3.95□□□□□ -1.78
RTN4-208ENST00000404909 C10orf76Q5T2E6 689 aa3.95□□□□□ -1.78
RTN4-208ENST00000404909 C12orf29Q8N999 325 aa3.95□□□□□ -1.78
RTN4-208ENST00000404909 ANKLE1Q8NAG6 615 aa3.95□□□□□ -1.78
RTN4-208ENST00000404909 APPL2Q8NEU8 664 aa3.95□□□□□ -1.78
RTN4-208ENST00000404909 TFAP2BQ92481 460 aa3.95□□□□□ -1.78
RTN4-208ENST00000404909 ELOVL4Q9GZR5 314 aa3.95□□□□□ -1.78
RTN4-208ENST00000404909 THAP2Q9H0W7 228 aa3.95□□□□□ -1.78
RTN4-208ENST00000404909 VRTNQ9H8Y1 702 aa3.95□□□□□ -1.78
RTN4-208ENST00000404909 CYP3A43Q9HB55 503 aa3.95□□□□□ -1.78
RTN4-208ENST00000404909 UBN1Q9NPG3 1134 aa3.95□□□□□ -1.78
RTN4-208ENST00000404909 BARX2Q9UMQ3 279 aaPredicted RBP3.95□□□□□ -1.78
RTN4-208ENST00000404909 PCDHB7Q9Y5E2 793 aa3.95□□□□□ -1.78
RTN4-208ENST00000404909 TIMM13Q9Y5L4 95 aaPredicted RBP3.95□□□□□ -1.78
RTN4-208ENST00000404909 A8MXQ7 604 aa3.95□□□□□ -1.78
RTN4-208ENST00000404909 I3L4J1 428 aa3.95□□□□□ -1.78
RTN4-208ENST00000404909 CYB561D2O14569 222 aa3.95□□□□□ -1.78
RTN4-208ENST00000404909 FANCGO15287 622 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms