RNA–Protein interactions for RNA: ENST00000401617.6

CLIP4-203, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5 BASIC

Gene CLIP4, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-203ENST00000401617 ECM2O94769 699 aaPredicted RBP13.05□□□□□ -0.32
CLIP4-203ENST00000401617 PROSCO94903 275 aa13.05□□□□□ -0.32
CLIP4-203ENST00000401617 PYGMP11217 842 aa13.05□□□□□ -0.32
CLIP4-203ENST00000401617 FGFR4P22455 802 aa13.05□□□□□ -0.32
CLIP4-203ENST00000401617 PAK2Q13177 524 aa13.05□□□□□ -0.32
CLIP4-203ENST00000401617 WDR72Q3MJ13 1102 aa13.05□□□□□ -0.32
CLIP4-203ENST00000401617 LLGL2Q6P1M3 1020 aa13.05□□□□□ -0.32
CLIP4-203ENST00000401617 MAATS1Q7Z4T9 603 aa13.05□□□□□ -0.32
CLIP4-203ENST00000401617 APBB1IPQ7Z5R6 666 aaPredicted RBP13.05□□□□□ -0.32
CLIP4-203ENST00000401617 TMEM130Q8N3G9 435 aa13.05□□□□□ -0.32
CLIP4-203ENST00000401617 WHAMMQ8TF30 809 aa13.05□□□□□ -0.32
CLIP4-203ENST00000401617 LHX5Q9H2C1 402 aa13.05□□□□□ -0.32
CLIP4-203ENST00000401617 ST7Q9NRC1 585 aa13.05□□□□□ -0.32
CLIP4-203ENST00000401617 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.05□□□□□ -0.32
CLIP4-203ENST00000401617 SCINQ9Y6U3 715 aa13.05□□□□□ -0.32
CLIP4-203ENST00000401617 H3BQF6 201 aa13.04□□□□□ -0.32
CLIP4-203ENST00000401617 MYO1FO00160 1098 aa13.04□□□□□ -0.32
CLIP4-203ENST00000401617 CA12O43570 354 aa13.04□□□□□ -0.32
CLIP4-203ENST00000401617 CALB1P05937 261 aa13.04□□□□□ -0.32
CLIP4-203ENST00000401617 KRT19P08727 400 aa13.04□□□□□ -0.32
CLIP4-203ENST00000401617 SSTR3P32745 418 aaPredicted RBP13.04□□□□□ -0.32
CLIP4-203ENST00000401617 RAD23BP54727 409 aa13.04□□□□□ -0.32
CLIP4-203ENST00000401617 RWDD2BP57060 319 aa13.04□□□□□ -0.32
CLIP4-203ENST00000401617 GABPB1Q06547 395 aaPredicted RBP13.04□□□□□ -0.32
CLIP4-203ENST00000401617 ZBTB6Q15916 424 aa13.04□□□□□ -0.32
CLIP4-203ENST00000401617 C2CD6Q53TS8 623 aa13.04□□□□□ -0.32
CLIP4-203ENST00000401617 AADACL2Q6P093 401 aa13.04□□□□□ -0.32
CLIP4-203ENST00000401617 SLC27A1Q6PCB7 646 aa13.04□□□□□ -0.32
CLIP4-203ENST00000401617 SCARA5Q6ZMJ2 495 aa13.04□□□□□ -0.32
CLIP4-203ENST00000401617 MMS22LQ6ZRQ5 1243 aa13.04□□□□□ -0.32
CLIP4-203ENST00000401617 ZDHHC14Q8IZN3 488 aa13.04□□□□□ -0.32
CLIP4-203ENST00000401617 TMEM35BQ8NCS4 154 aa13.04□□□□□ -0.32
CLIP4-203ENST00000401617 TRPV1Q8NER1 839 aa13.04□□□□□ -0.32
CLIP4-203ENST00000401617 CCDC26Q8TAB7 109 aa13.04□□□□□ -0.32
CLIP4-203ENST00000401617 KATNAL1Q9BW62 490 aa13.04□□□□□ -0.32
CLIP4-203ENST00000401617 ERVK-5Q9HDB9 667 aa13.04□□□□□ -0.32
CLIP4-203ENST00000401617 PARVAQ9NVD7 372 aa13.04□□□□□ -0.32
CLIP4-203ENST00000401617 DPP3Q9NY33 737 aa13.04□□□□□ -0.32
CLIP4-203ENST00000401617 NXF1Q9UBU9 619 aaKnown RBP13.04□□□□□ -0.32
CLIP4-203ENST00000401617 GOLGA6L10A0A0M3HER8 536 aa13.04□□□□□ -0.32
CLIP4-203ENST00000401617 DUSP11O75319 330 aaKnown RBP13.04□□□□□ -0.32
CLIP4-203ENST00000401617 CILPO75339 1184 aa13.04□□□□□ -0.32
CLIP4-203ENST00000401617 NPTXRO95502 500 aa13.04□□□□□ -0.32
CLIP4-203ENST00000401617 MYL3P08590 195 aa13.04□□□□□ -0.32
CLIP4-203ENST00000401617 OAS2P29728 719 aaKnown RBP13.04□□□□□ -0.32
CLIP4-203ENST00000401617 AXLP30530 894 aa13.04□□□□□ -0.32
CLIP4-203ENST00000401617 POLR2BP30876 1174 aaKnown RBP13.04□□□□□ -0.32
CLIP4-203ENST00000401617 MAN1A1P33908 653 aa13.04□□□□□ -0.32
CLIP4-203ENST00000401617 RBP5P82980 135 aa13.04□□□□□ -0.32
CLIP4-203ENST00000401617 PURAQ00577 322 aaKnown RBP13.04□□□□□ -0.32
CLIP4-203ENST00000401617 BEX3Q00994 111 aa13.04□□□□□ -0.32
CLIP4-203ENST00000401617 TMEM62Q0P6H9 643 aa13.04□□□□□ -0.32
CLIP4-203ENST00000401617 GPS2Q13227 327 aa13.04□□□□□ -0.32
CLIP4-203ENST00000401617 CUL1Q13616 776 aa13.04□□□□□ -0.32
CLIP4-203ENST00000401617 FSCN1Q16658 493 aaKnown RBP13.04□□□□□ -0.32
CLIP4-203ENST00000401617 CYP1B1Q16678 543 aa13.04□□□□□ -0.32
CLIP4-203ENST00000401617 SEL1L2Q5TEA6 688 aa13.04□□□□□ -0.32
CLIP4-203ENST00000401617 NOTUMQ6P988 496 aa13.04□□□□□ -0.32
CLIP4-203ENST00000401617 ALKAL1Q6UXT8 129 aa13.04□□□□□ -0.32
CLIP4-203ENST00000401617 CATSPER4Q7RTX7 472 aa13.04□□□□□ -0.32
CLIP4-203ENST00000401617 SLC13A5Q86YT5 568 aaPredicted RBP13.04□□□□□ -0.32
CLIP4-203ENST00000401617 HPDLQ96IR7 371 aa13.04□□□□□ -0.32
CLIP4-203ENST00000401617 HHIPL1Q96JK4 782 aa13.04□□□□□ -0.32
CLIP4-203ENST00000401617 SNX27Q96L92 541 aa13.04□□□□□ -0.32
CLIP4-203ENST00000401617 SMYD3Q9H7B4 428 aa13.04□□□□□ -0.32
CLIP4-203ENST00000401617 AMACRQ9UHK6 382 aa13.04□□□□□ -0.32
CLIP4-203ENST00000401617 NFU1Q9UMS0 254 aa13.04□□□□□ -0.32
CLIP4-203ENST00000401617 ESYT3A0FGR9 886 aa13.03□□□□□ -0.32
CLIP4-203ENST00000401617 TREHO43280 583 aa13.03□□□□□ -0.32
CLIP4-203ENST00000401617 P4HA1P13674 534 aa13.03□□□□□ -0.32
CLIP4-203ENST00000401617 AKR1A1P14550 325 aa13.03□□□□□ -0.32
CLIP4-203ENST00000401617 ECHS1P30084 290 aa13.03□□□□□ -0.32
CLIP4-203ENST00000401617 TNNT3P45378 269 aaPredicted RBP13.03□□□□□ -0.32
CLIP4-203ENST00000401617 RAP1GAPP47736 663 aa13.03□□□□□ -0.32
CLIP4-203ENST00000401617 NKX3-2P78367 333 aa13.03□□□□□ -0.32
CLIP4-203ENST00000401617 INCA1Q0VD86 236 aa13.03□□□□□ -0.32
CLIP4-203ENST00000401617 SIX1Q15475 284 aaPredicted RBP13.03□□□□□ -0.32
CLIP4-203ENST00000401617 TRADDQ15628 312 aa13.03□□□□□ -0.32
CLIP4-203ENST00000401617 ZNF394Q53GI3 561 aa13.03□□□□□ -0.32
CLIP4-203ENST00000401617 SND1Q7KZF4 910 aaKnown RBP eCLIP13.03□□□□□ -0.32
CLIP4-203ENST00000401617 NME8Q8N427 588 aa13.03□□□□□ -0.32
CLIP4-203ENST00000401617 MREGQ8N565 214 aa13.03□□□□□ -0.32
CLIP4-203ENST00000401617 PRELID2Q8N945 189 aa13.03□□□□□ -0.32
CLIP4-203ENST00000401617 SLC4A11Q8NBS3 891 aa13.03□□□□□ -0.32
CLIP4-203ENST00000401617 C1orf131Q8NDD1 294 aaKnown RBP13.03□□□□□ -0.32
CLIP4-203ENST00000401617 FEZF2Q8TBJ5 459 aa13.03□□□□□ -0.32
CLIP4-203ENST00000401617 DNAJB3Q8WWF6 145 aa13.03□□□□□ -0.32
CLIP4-203ENST00000401617 OSMRQ99650 979 aa13.03□□□□□ -0.32
CLIP4-203ENST00000401617 ACBD3Q9H3P7 528 aa13.03□□□□□ -0.32
CLIP4-203ENST00000401617 AGAP1Q9UPQ3 857 aa13.03□□□□□ -0.32
CLIP4-203ENST00000401617 A0A0U1RQG5 324 aaPredicted RBP13.03□□□□□ -0.32
CLIP4-203ENST00000401617 TMEM191CA6NGB0 347 aa13.03□□□□□ -0.32
CLIP4-203ENST00000401617 FSCN2O14926 492 aa13.03□□□□□ -0.32
CLIP4-203ENST00000401617 KPNA6O60684 536 aa13.03□□□□□ -0.32
CLIP4-203ENST00000401617 GUCY2FP51841 1108 aa13.03□□□□□ -0.32
CLIP4-203ENST00000401617 CDH8P55286 799 aa13.03□□□□□ -0.32
CLIP4-203ENST00000401617 SNX17Q15036 470 aa13.03□□□□□ -0.32
CLIP4-203ENST00000401617 PPP1R15BQ5SWA1 713 aa13.03□□□□□ -0.32
CLIP4-203ENST00000401617 PHLDB2Q86SQ0 1253 aa13.03□□□□□ -0.32
CLIP4-203ENST00000401617 PPP1R13LQ8WUF5 828 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms