RNA–Protein interactions for RNA: ENST00000401499.1

AC008060.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC008060.1, Length 1,551 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008060.1-201ENST00000401499 RRAGDQ9NQL2 400 aaPredicted RBP20.78■□□□□ 0.92
AC008060.1-201ENST00000401499 SNX9Q9Y5X1 595 aa20.78■□□□□ 0.92
AC008060.1-201ENST00000401499 RCCD1A6NED2 376 aa20.77■□□□□ 0.92
AC008060.1-201ENST00000401499 CASTOR2A6NHX0 329 aa20.77■□□□□ 0.92
AC008060.1-201ENST00000401499 ABL1P00519 1130 aa20.77■□□□□ 0.92
AC008060.1-201ENST00000401499 PNPLA4P41247 253 aa20.77■□□□□ 0.92
AC008060.1-201ENST00000401499 KRT83P78385 493 aa20.77■□□□□ 0.92
AC008060.1-201ENST00000401499 FMO1Q01740 532 aa20.77■□□□□ 0.92
AC008060.1-201ENST00000401499 TAF3Q5VWG9 929 aa20.77■□□□□ 0.92
AC008060.1-201ENST00000401499 CNKSR3Q6P9H4 555 aa20.77■□□□□ 0.92
AC008060.1-201ENST00000401499 GLB1LQ6UWU2 654 aa20.77■□□□□ 0.92
AC008060.1-201ENST00000401499 RPUSD2Q8IZ73 545 aaKnown RBP20.77■□□□□ 0.92
AC008060.1-201ENST00000401499 WHAMMQ8TF30 809 aa20.77■□□□□ 0.92
AC008060.1-201ENST00000401499 MMS19Q96T76 1030 aa20.77■□□□□ 0.92
AC008060.1-201ENST00000401499 HMGXB4Q9UGU5 601 aa20.77■□□□□ 0.92
AC008060.1-201ENST00000401499 NAGPAQ9UK23 515 aa20.77■□□□□ 0.92
AC008060.1-201ENST00000401499 PCDHA13Q9Y5I0 950 aa20.77■□□□□ 0.92
AC008060.1-201ENST00000401499 FNDC1Q4ZHG4 1894 aaPredicted RBP20.77■□□□□ 0.92
AC008060.1-201ENST00000401499 KPNA7A9QM74 516 aa20.76■□□□□ 0.91
AC008060.1-201ENST00000401499 PODXLO00592 558 aa20.76■□□□□ 0.91
AC008060.1-201ENST00000401499 CCP110O43303 1012 aa20.76■□□□□ 0.91
AC008060.1-201ENST00000401499 B4GALT3O60512 393 aa20.76■□□□□ 0.91
AC008060.1-201ENST00000401499 CILPO75339 1184 aa20.76■□□□□ 0.91
AC008060.1-201ENST00000401499 IPO7O95373 1038 aaKnown RBP20.76■□□□□ 0.91
AC008060.1-201ENST00000401499 MMEP08473 750 aa20.76■□□□□ 0.91
AC008060.1-201ENST00000401499 ARHGAP25P42331 645 aa20.76■□□□□ 0.91
AC008060.1-201ENST00000401499 LILRA4P59901 499 aa20.76■□□□□ 0.91
AC008060.1-201ENST00000401499 YWHAEP62258 255 aaKnown RBP20.76■□□□□ 0.91
AC008060.1-201ENST00000401499 INCA1Q0VD86 236 aa20.76■□□□□ 0.91
AC008060.1-201ENST00000401499 SPA17Q15506 151 aa20.76■□□□□ 0.91
AC008060.1-201ENST00000401499 SV2CQ496J9 727 aa20.76■□□□□ 0.91
AC008060.1-201ENST00000401499 ZNF394Q53GI3 561 aa20.76■□□□□ 0.91
AC008060.1-201ENST00000401499 VPS36Q86VN1 386 aa20.76■□□□□ 0.91
AC008060.1-201ENST00000401499 C3orf58Q8NDZ4 430 aa20.76■□□□□ 0.91
AC008060.1-201ENST00000401499 RABGGTAQ92696 567 aa20.76■□□□□ 0.91
AC008060.1-201ENST00000401499 TWNKQ96RR1 684 aa20.76■□□□□ 0.91
AC008060.1-201ENST00000401499 PCDHB18PQ96TA0 734 aa20.76■□□□□ 0.91
AC008060.1-201ENST00000401499 GDAP2Q9NXN4 497 aa20.76■□□□□ 0.91
AC008060.1-201ENST00000401499 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.76■□□□□ 0.91
AC008060.1-201ENST00000401499 CSF2RAP15509 400 aa20.76■□□□□ 0.91
AC008060.1-201ENST00000401499 RAG1P15918 1043 aa20.76■□□□□ 0.91
AC008060.1-201ENST00000401499 TNFAIP3P21580 790 aa20.76■□□□□ 0.91
AC008060.1-201ENST00000401499 GNA15P30679 374 aa20.76■□□□□ 0.91
AC008060.1-201ENST00000401499 VAV2P52735 878 aa20.76■□□□□ 0.91
AC008060.1-201ENST00000401499 CDR2Q01850 454 aa20.76■□□□□ 0.91
AC008060.1-201ENST00000401499 TUSC3Q13454 348 aa20.76■□□□□ 0.91
AC008060.1-201ENST00000401499 UPP1Q16831 310 aa20.76■□□□□ 0.91
AC008060.1-201ENST00000401499 NOMO2Q5JPE7 1267 aa20.76■□□□□ 0.91
AC008060.1-201ENST00000401499 SMYD5Q6GMV2 418 aa20.76■□□□□ 0.91
AC008060.1-201ENST00000401499 DNAAF5Q86Y56 855 aa20.76■□□□□ 0.91
AC008060.1-201ENST00000401499 MRPL45Q9BRJ2 306 aaKnown RBP20.76■□□□□ 0.91
AC008060.1-201ENST00000401499 PCDHB7Q9Y5E2 793 aa20.76■□□□□ 0.91
AC008060.1-201ENST00000401499 TSC2P49815 1807 aa20.75■□□□□ 0.91
AC008060.1-201ENST00000401499 MAGEA1P43355 309 aa20.75■□□□□ 0.91
AC008060.1-201ENST00000401499 GATMP50440 423 aa20.75■□□□□ 0.91
AC008060.1-201ENST00000401499 BPIFB4P59827 614 aa20.75■□□□□ 0.91
AC008060.1-201ENST00000401499 SOWAHAQ2M3V2 549 aa20.75■□□□□ 0.91
AC008060.1-201ENST00000401499 MFSD5Q6N075 450 aa20.75■□□□□ 0.91
AC008060.1-201ENST00000401499 ALKBH5Q6P6C2 394 aaKnown RBP20.75■□□□□ 0.91
AC008060.1-201ENST00000401499 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.75■□□□□ 0.91
AC008060.1-201ENST00000401499 LIMS2Q7Z4I7 341 aa20.75■□□□□ 0.91
AC008060.1-201ENST00000401499 ZSWIM1Q9BR11 485 aa20.75■□□□□ 0.91
AC008060.1-201ENST00000401499 PACSIN1Q9BY11 444 aa20.75■□□□□ 0.91
AC008060.1-201ENST00000401499 ELOVL4Q9GZR5 314 aa20.75■□□□□ 0.91
AC008060.1-201ENST00000401499 LACRTQ9GZZ8 138 aa20.75■□□□□ 0.91
AC008060.1-201ENST00000401499 LZTFL1Q9NQ48 299 aa20.75■□□□□ 0.91
AC008060.1-201ENST00000401499 TRIM10Q9UDY6 481 aa20.75■□□□□ 0.91
AC008060.1-201ENST00000401499 NME7Q9Y5B8 376 aa20.75■□□□□ 0.91
AC008060.1-201ENST00000401499 COL4A6Q14031 1691 aa20.74■□□□□ 0.91
AC008060.1-201ENST00000401499 DDHD2O94830 711 aa20.74■□□□□ 0.91
AC008060.1-201ENST00000401499 RPL9P32969 192 aaKnown RBP20.74■□□□□ 0.91
AC008060.1-201ENST00000401499 RAD23BP54727 409 aa20.74■□□□□ 0.91
AC008060.1-201ENST00000401499 DSC1Q08554 894 aa20.74■□□□□ 0.91
AC008060.1-201ENST00000401499 ORC1Q13415 861 aa20.74■□□□□ 0.91
AC008060.1-201ENST00000401499 CCDC122Q5T0U0 273 aa20.74■□□□□ 0.91
AC008060.1-201ENST00000401499 NYAP1Q6ZVC0 841 aa20.74■□□□□ 0.91
AC008060.1-201ENST00000401499 KIAA1328Q86T90 577 aa20.74■□□□□ 0.91
AC008060.1-201ENST00000401499 ZNF280BQ86YH2 543 aa20.74■□□□□ 0.91
AC008060.1-201ENST00000401499 SLC4A11Q8NBS3 891 aa20.74■□□□□ 0.91
AC008060.1-201ENST00000401499 URGCPQ8TCY9 931 aa20.74■□□□□ 0.91
AC008060.1-201ENST00000401499 KBTBD7Q8WVZ9 684 aa20.74■□□□□ 0.91
AC008060.1-201ENST00000401499 FAM124BQ9H5Z6 455 aaPredicted RBP20.74■□□□□ 0.91
AC008060.1-201ENST00000401499 SEPT11Q9NVA2 429 aaKnown RBP20.74■□□□□ 0.91
AC008060.1-201ENST00000401499 TBC1D13Q9NVG8 400 aa20.74■□□□□ 0.91
AC008060.1-201ENST00000401499 TAS2R14Q9NYV8 317 aa20.74■□□□□ 0.91
AC008060.1-201ENST00000401499 BARX2Q9UMQ3 279 aaPredicted RBP20.74■□□□□ 0.91
AC008060.1-201ENST00000401499 L1RE1Q9UN81 338 aa20.74■□□□□ 0.91
AC008060.1-201ENST00000401499 CFHP08603 1231 aa20.73■□□□□ 0.91
AC008060.1-201ENST00000401499 NDST1P52848 882 aa20.73■□□□□ 0.91
AC008060.1-201ENST00000401499 IKBKEQ14164 716 aa20.73■□□□□ 0.91
AC008060.1-201ENST00000401499 CD300LGQ6UXG3 332 aa20.73■□□□□ 0.91
AC008060.1-201ENST00000401499 ZNF662Q6ZS27 426 aa20.73■□□□□ 0.91
AC008060.1-201ENST00000401499 ZNF677Q86XU0 584 aa20.73■□□□□ 0.91
AC008060.1-201ENST00000401499 C16orf45Q96MC5 204 aaPredicted RBP20.73■□□□□ 0.91
AC008060.1-201ENST00000401499 CASD1Q96PB1 797 aa20.73■□□□□ 0.91
AC008060.1-201ENST00000401499 LRFN2Q9ULH4 789 aa20.73■□□□□ 0.91
AC008060.1-201ENST00000401499 FAM170AA1A519 330 aa20.72■□□□□ 0.91
AC008060.1-201ENST00000401499 GOLGA6L9A6NEM1 432 aa20.72■□□□□ 0.91
AC008060.1-201ENST00000401499 THAP12O43422 761 aa20.72■□□□□ 0.91
AC008060.1-201ENST00000401499 BRD2P25440 801 aaKnown RBP20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms