RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 CDX2Q99626 313 aaPredicted RBP8.08□□□□□ -1.12
USP16-204ENST00000399976 SRRTQ9BXP5 876 aaKnown RBP8.08□□□□□ -1.12
USP16-204ENST00000399976 UBXN6Q9BZV1 441 aa8.08□□□□□ -1.12
USP16-204ENST00000399976 PNPLA8Q9NP80 782 aa8.08□□□□□ -1.12
USP16-204ENST00000399976 ASB3Q9Y575 518 aa8.08□□□□□ -1.12
USP16-204ENST00000399976 NCANO14594 1321 aa8.08□□□□□ -1.12
USP16-204ENST00000399976 A0A1W2PQC6 194 aa8.08□□□□□ -1.12
USP16-204ENST00000399976 B3GAT3O94766 335 aa8.08□□□□□ -1.12
USP16-204ENST00000399976 ITGB3P05106 788 aa8.08□□□□□ -1.12
USP16-204ENST00000399976 POLR2BP30876 1174 aaKnown RBP8.08□□□□□ -1.12
USP16-204ENST00000399976 CLCN4P51793 760 aa8.08□□□□□ -1.12
USP16-204ENST00000399976 MYL7Q01449 175 aa8.08□□□□□ -1.12
USP16-204ENST00000399976 GPR17Q13304 367 aa8.08□□□□□ -1.12
USP16-204ENST00000399976 ADAM15Q13444 863 aa8.08□□□□□ -1.12
USP16-204ENST00000399976 STILQ15468 1287 aa8.08□□□□□ -1.12
USP16-204ENST00000399976 NFE2Q16621 373 aaPredicted RBP8.08□□□□□ -1.12
USP16-204ENST00000399976 FIGNQ5HY92 759 aa8.08□□□□□ -1.12
USP16-204ENST00000399976 FAM171BQ6P995 826 aa8.08□□□□□ -1.12
USP16-204ENST00000399976 DCP1BQ8IZD4 617 aaKnown RBP8.08□□□□□ -1.12
USP16-204ENST00000399976 VPS52Q8N1B4 723 aa8.08□□□□□ -1.12
USP16-204ENST00000399976 CRYBG2Q8N1P7 616 aa8.08□□□□□ -1.12
USP16-204ENST00000399976 ZSWIM2Q8NEG5 633 aa8.08□□□□□ -1.12
USP16-204ENST00000399976 OR5B17Q8NGF7 314 aa8.08□□□□□ -1.12
USP16-204ENST00000399976 SPPL2BQ8TCT7 592 aa8.08□□□□□ -1.12
USP16-204ENST00000399976 SENP8Q96LD8 212 aa8.08□□□□□ -1.12
USP16-204ENST00000399976 ERGIC2Q96RQ1 377 aa8.08□□□□□ -1.12
USP16-204ENST00000399976 NIF3L1Q9GZT8 377 aa8.08□□□□□ -1.12
USP16-204ENST00000399976 RAB20Q9NX57 234 aa8.08□□□□□ -1.12
USP16-204ENST00000399976 AFF4Q9UHB7 1163 aaKnown RBP8.08□□□□□ -1.12
USP16-204ENST00000399976 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.08□□□□□ -1.12
USP16-204ENST00000399976 ATP8B3O60423 1300 aa8.07□□□□□ -1.12
USP16-204ENST00000399976 CLUHO75153 1309 aa8.07□□□□□ -1.12
USP16-204ENST00000399976 TRIM49BA6NDI0 452 aa8.07□□□□□ -1.12
USP16-204ENST00000399976 CLASP2O75122 1294 aaKnown RBP8.07□□□□□ -1.12
USP16-204ENST00000399976 HARSP12081 509 aaKnown RBP8.07□□□□□ -1.12
USP16-204ENST00000399976 DNAJB1P25685 340 aa8.07□□□□□ -1.12
USP16-204ENST00000399976 OSTNP61366 133 aa8.07□□□□□ -1.12
USP16-204ENST00000399976 TFAMQ00059 246 aaKnown RBP8.07□□□□□ -1.12
USP16-204ENST00000399976 PPP3CAQ08209 521 aa8.07□□□□□ -1.12
USP16-204ENST00000399976 TRPC3Q13507 836 aa8.07□□□□□ -1.12
USP16-204ENST00000399976 PSMD5Q16401 504 aa8.07□□□□□ -1.12
USP16-204ENST00000399976 CFAP221Q4G0U5 840 aa8.07□□□□□ -1.12
USP16-204ENST00000399976 CCDC40Q4G0X9 1142 aa8.07□□□□□ -1.12
USP16-204ENST00000399976 CCDC149Q6ZUS6 474 aa8.07□□□□□ -1.12
USP16-204ENST00000399976 DHX40Q8IX18 779 aaKnown RBP8.07□□□□□ -1.12
USP16-204ENST00000399976 SCML4Q8N228 414 aa8.07□□□□□ -1.12
USP16-204ENST00000399976 ARNTL2Q8WYA1 636 aa8.07□□□□□ -1.12
USP16-204ENST00000399976 LRCH3Q96II8 777 aa8.07□□□□□ -1.12
USP16-204ENST00000399976 GPR62Q9BZJ7 368 aa8.07□□□□□ -1.12
USP16-204ENST00000399976 CXCL16Q9H2A7 254 aa8.07□□□□□ -1.12
USP16-204ENST00000399976 IKZF4Q9H2S9 585 aa8.07□□□□□ -1.12
USP16-204ENST00000399976 AGAP1Q9UPQ3 857 aa8.07□□□□□ -1.12
USP16-204ENST00000399976 R3HCC1Q9Y3T6 440 aaKnown RBP8.07□□□□□ -1.12
USP16-204ENST00000399976 GOLGA8IPA6NC78 632 aa8.07□□□□□ -1.12
USP16-204ENST00000399976 CASTOR2A6NHX0 329 aa8.07□□□□□ -1.12
USP16-204ENST00000399976 GOLGA8JA6NMD2 632 aa8.07□□□□□ -1.12
USP16-204ENST00000399976 KCNJ18B7U540 433 aa8.07□□□□□ -1.12
USP16-204ENST00000399976 HUS1O60921 280 aa8.07□□□□□ -1.12
USP16-204ENST00000399976 HLA-DRAP01903 254 aa8.07□□□□□ -1.12
USP16-204ENST00000399976 PAEPP09466 180 aa8.07□□□□□ -1.12
USP16-204ENST00000399976 YWHAHQ04917 246 aaPredicted RBP8.07□□□□□ -1.12
USP16-204ENST00000399976 ITIH3Q06033 890 aa8.07□□□□□ -1.12
USP16-204ENST00000399976 KCNJ12Q14500 433 aa8.07□□□□□ -1.12
USP16-204ENST00000399976 TPRNQ4KMQ1 711 aa8.07□□□□□ -1.12
USP16-204ENST00000399976 VWA3BQ502W6 1294 aa8.07□□□□□ -1.12
USP16-204ENST00000399976 ZNF667Q5HYK9 610 aa8.07□□□□□ -1.12
USP16-204ENST00000399976 MIIPQ5JXC2 388 aa8.07□□□□□ -1.12
USP16-204ENST00000399976 VARS2Q5ST30 1063 aaKnown RBP8.07□□□□□ -1.12
USP16-204ENST00000399976 APTXQ7Z2E3 356 aaKnown RBP8.07□□□□□ -1.12
USP16-204ENST00000399976 TMCO2Q7Z6W1 182 aaPredicted RBP8.07□□□□□ -1.12
USP16-204ENST00000399976 ZNF276Q8N554 614 aa8.07□□□□□ -1.12
USP16-204ENST00000399976 DEFB123Q8N688 67 aa8.07□□□□□ -1.12
USP16-204ENST00000399976 EHBP1Q8NDI1 1231 aa8.07□□□□□ -1.12
USP16-204ENST00000399976 NECTIN4Q96NY8 510 aa8.07□□□□□ -1.12
USP16-204ENST00000399976 TCF25Q9BQ70 676 aa8.07□□□□□ -1.12
USP16-204ENST00000399976 HSD3B7Q9H2F3 369 aa8.07□□□□□ -1.12
USP16-204ENST00000399976 SFXN1Q9H9B4 322 aa8.07□□□□□ -1.12
USP16-204ENST00000399976 CYLDQ9NQC7 956 aa8.07□□□□□ -1.12
USP16-204ENST00000399976 EHD2Q9NZN4 543 aa8.07□□□□□ -1.12
USP16-204ENST00000399976 NFE2L3Q9Y4A8 694 aa8.07□□□□□ -1.12
USP16-204ENST00000399976 NUB1Q9Y5A7 615 aa8.07□□□□□ -1.12
USP16-204ENST00000399976 ZFP37Q9Y6Q3 630 aaPredicted RBP8.07□□□□□ -1.12
USP16-204ENST00000399976 ASPAP45381 313 aa8.07□□□□□ -1.12
USP16-204ENST00000399976 EPHA5P54756 1037 aa8.07□□□□□ -1.12
USP16-204ENST00000399976 TNNC1P63316 161 aa8.07□□□□□ -1.12
USP16-204ENST00000399976 KCNH2Q12809 1159 aa8.07□□□□□ -1.12
USP16-204ENST00000399976 ZNF699Q32M78 642 aa8.07□□□□□ -1.12
USP16-204ENST00000399976 LEXMQ3ZCV2 418 aa8.07□□□□□ -1.12
USP16-204ENST00000399976 TMEM173Q86WV6 379 aaPredicted RBP8.07□□□□□ -1.12
USP16-204ENST00000399976 VN1R2Q8NFZ6 395 aa8.07□□□□□ -1.12
USP16-204ENST00000399976 ZNF461Q8TAF7 563 aa8.07□□□□□ -1.12
USP16-204ENST00000399976 MSLNLQ96KJ4 702 aa8.07□□□□□ -1.12
USP16-204ENST00000399976 TNIP3Q96KP6 325 aa8.07□□□□□ -1.12
USP16-204ENST00000399976 SPATA17Q96L03 361 aa8.07□□□□□ -1.12
USP16-204ENST00000399976 FAM50BQ9Y247 325 aa8.07□□□□□ -1.12
USP16-204ENST00000399976 DNAH12Q6ZR08 3092 aa8.06□□□□□ -1.12
USP16-204ENST00000399976 MYO16Q9Y6X6 1858 aa8.06□□□□□ -1.12
USP16-204ENST00000399976 ITIH6Q6UXX5 1313 aa8.06□□□□□ -1.12
USP16-204ENST00000399976 ZNF638Q14966 1978 aaKnown RBP8.06□□□□□ -1.12
USP16-204ENST00000399976 COL4A2P08572 1712 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms