RNA–Protein interactions for RNA: ENST00000399793.6

RETREG1-202, Transcript of reticulophagy regulator 1, humanhuman

TSL 1 (best) BASIC

Gene RETREG1, Length 3,145 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-202ENST00000399793 TRIM55Q9BYV6 548 aa9.18□□□□□ -0.94
RETREG1-202ENST00000399793 PAIP1Q9H074 479 aaKnown RBP9.18□□□□□ -0.94
RETREG1-202ENST00000399793 RIC8AQ9NPQ8 531 aa9.18□□□□□ -0.94
RETREG1-202ENST00000399793 GIN1Q9NXP7 522 aa9.18□□□□□ -0.94
RETREG1-202ENST00000399793 TCRBV7S2A1N4TA0A589 114 aa9.18□□□□□ -0.94
RETREG1-202ENST00000399793 CAPN8A6NHC0 703 aa9.18□□□□□ -0.94
RETREG1-202ENST00000399793 RSPH10B2B2RC85 870 aa9.18□□□□□ -0.94
RETREG1-202ENST00000399793 TNFRSF10AO00220 468 aa9.18□□□□□ -0.94
RETREG1-202ENST00000399793 TRAF5O00463 557 aa9.18□□□□□ -0.94
RETREG1-202ENST00000399793 DENRO43583 198 aaKnown RBP9.18□□□□□ -0.94
RETREG1-202ENST00000399793 FOXD2O60548 495 aaPredicted RBP9.18□□□□□ -0.94
RETREG1-202ENST00000399793 CAMTA2O94983 1202 aa9.18□□□□□ -0.94
RETREG1-202ENST00000399793 TNFAIP8O95379 198 aa9.18□□□□□ -0.94
RETREG1-202ENST00000399793 ENO1P06733 434 aaKnown RBP9.18□□□□□ -0.94
RETREG1-202ENST00000399793 RSPH10BP0C881 870 aa9.18□□□□□ -0.94
RETREG1-202ENST00000399793 THRAP10827 490 aa9.18□□□□□ -0.94
RETREG1-202ENST00000399793 SLC5A3P53794 718 aa9.18□□□□□ -0.94
RETREG1-202ENST00000399793 PSMC1P62191 440 aaKnown RBP9.18□□□□□ -0.94
RETREG1-202ENST00000399793 AMPD3Q01432 767 aa9.18□□□□□ -0.94
RETREG1-202ENST00000399793 ATP1A4Q13733 1029 aa9.18□□□□□ -0.94
RETREG1-202ENST00000399793 NR1D2Q14995 579 aa9.18□□□□□ -0.94
RETREG1-202ENST00000399793 GRAMD1BQ3KR37 738 aa9.18□□□□□ -0.94
RETREG1-202ENST00000399793 IL23RQ5VWK5 629 aa9.18□□□□□ -0.94
RETREG1-202ENST00000399793 PPP2R2DQ66LE6 453 aa9.18□□□□□ -0.94
RETREG1-202ENST00000399793 LVRNQ6Q4G3 990 aa9.18□□□□□ -0.94
RETREG1-202ENST00000399793 RAVER1Q8IY67 606 aaKnown RBP9.18□□□□□ -0.94
RETREG1-202ENST00000399793 MORC4Q8TE76 937 aa9.18□□□□□ -0.94
RETREG1-202ENST00000399793 EME1Q96AY2 570 aa9.18□□□□□ -0.94
RETREG1-202ENST00000399793 SPATA17Q96L03 361 aa9.18□□□□□ -0.94
RETREG1-202ENST00000399793 ZNF696Q9H7X3 374 aa9.18□□□□□ -0.94
RETREG1-202ENST00000399793 ZNF287Q9HBT7 754 aa9.18□□□□□ -0.94
RETREG1-202ENST00000399793 IGSF9BQ9UPX0 1349 aa9.18□□□□□ -0.94
RETREG1-202ENST00000399793 ANKRD34BA5PLL1 514 aa9.18□□□□□ -0.94
RETREG1-202ENST00000399793 IRS4O14654 1257 aaPredicted RBP9.18□□□□□ -0.94
RETREG1-202ENST00000399793 RNMTO43148 476 aaKnown RBP9.18□□□□□ -0.94
RETREG1-202ENST00000399793 DNAJA2O60884 412 aa9.18□□□□□ -0.94
RETREG1-202ENST00000399793 VEGFAP15692 232 aaPredicted RBP9.18□□□□□ -0.94
RETREG1-202ENST00000399793 TCEA1P23193 301 aaKnown RBP9.18□□□□□ -0.94
RETREG1-202ENST00000399793 GSSP48637 474 aa9.18□□□□□ -0.94
RETREG1-202ENST00000399793 CDK9P50750 372 aaKnown RBP9.18□□□□□ -0.94
RETREG1-202ENST00000399793 SLC18A1P54219 525 aa9.18□□□□□ -0.94
RETREG1-202ENST00000399793 GK3PQ14409 553 aa9.18□□□□□ -0.94
RETREG1-202ENST00000399793 PSMD6Q15008 389 aa9.18□□□□□ -0.94
RETREG1-202ENST00000399793 PPP2R5BQ15173 497 aa9.18□□□□□ -0.94
RETREG1-202ENST00000399793 PHKG1Q16816 387 aa9.18□□□□□ -0.94
RETREG1-202ENST00000399793 PUS10Q3MIT2 529 aaKnown RBP9.18□□□□□ -0.94
RETREG1-202ENST00000399793 ITPRIPL1Q6GPH6 555 aa9.18□□□□□ -0.94
RETREG1-202ENST00000399793 OGFOD2Q6N063 350 aa9.18□□□□□ -0.94
RETREG1-202ENST00000399793 PPP1R2P3Q6NXS1 205 aa9.18□□□□□ -0.94
RETREG1-202ENST00000399793 DYMQ7RTS9 669 aa9.18□□□□□ -0.94
RETREG1-202ENST00000399793 ANKLE2Q86XL3 938 aa9.18□□□□□ -0.94
RETREG1-202ENST00000399793 AHI1Q8N157 1196 aa9.18□□□□□ -0.94
RETREG1-202ENST00000399793 SLC26A7Q8TE54 656 aa9.18□□□□□ -0.94
RETREG1-202ENST00000399793 RBM15Q96T37 977 aaKnown RBP eCLIP9.18□□□□□ -0.94
RETREG1-202ENST00000399793 EHD1Q9H4M9 534 aa9.18□□□□□ -0.94
RETREG1-202ENST00000399793 RETREG1Q9H6L5 497 aa9.18□□□□□ -0.94
RETREG1-202ENST00000399793 KCNK13Q9HB14 408 aa9.18□□□□□ -0.94
RETREG1-202ENST00000399793 MAN1C1Q9NR34 630 aa9.18□□□□□ -0.94
RETREG1-202ENST00000399793 WHRNQ9P202 907 aa9.18□□□□□ -0.94
RETREG1-202ENST00000399793 SNX9Q9Y5X1 595 aa9.18□□□□□ -0.94
RETREG1-202ENST00000399793 SYNGAP1Q96PV0 1343 aa9.18□□□□□ -0.94
RETREG1-202ENST00000399793 KAT6BQ8WYB5 2073 aa9.17□□□□□ -0.94
RETREG1-202ENST00000399793 FBXO21O94952 628 aa9.17□□□□□ -0.94
RETREG1-202ENST00000399793 APOEP02649 317 aa9.17□□□□□ -0.94
RETREG1-202ENST00000399793 VDRP11473 427 aa9.17□□□□□ -0.94
RETREG1-202ENST00000399793 SLC9A1P19634 815 aa9.17□□□□□ -0.94
RETREG1-202ENST00000399793 ABCB4P21439 1286 aa9.17□□□□□ -0.94
RETREG1-202ENST00000399793 MARCKSL1P49006 195 aa9.17□□□□□ -0.94
RETREG1-202ENST00000399793 NUP107P57740 925 aa9.17□□□□□ -0.94
RETREG1-202ENST00000399793 RPS3AP61247 264 aaKnown RBP9.17□□□□□ -0.94
RETREG1-202ENST00000399793 ARHGAP4P98171 946 aa9.17□□□□□ -0.94
RETREG1-202ENST00000399793 STAT4Q14765 748 aa9.17□□□□□ -0.94
RETREG1-202ENST00000399793 KCNJ8Q15842 424 aa9.17□□□□□ -0.94
RETREG1-202ENST00000399793 PKN2Q16513 984 aaKnown RBP9.17□□□□□ -0.94
RETREG1-202ENST00000399793 MDH1BQ5I0G3 518 aa9.17□□□□□ -0.94
RETREG1-202ENST00000399793 AKAP4Q5JQC9 854 aa9.17□□□□□ -0.94
RETREG1-202ENST00000399793 VPS36Q86VN1 386 aa9.17□□□□□ -0.94
RETREG1-202ENST00000399793 PPM1KQ8N3J5 372 aa9.17□□□□□ -0.94
RETREG1-202ENST00000399793 RFFLQ8WZ73 363 aa9.17□□□□□ -0.94
RETREG1-202ENST00000399793 KRT35Q92764 455 aa9.17□□□□□ -0.94
RETREG1-202ENST00000399793 TMIGD2Q96BF3 282 aa9.17□□□□□ -0.94
RETREG1-202ENST00000399793 PLEKHA8Q96JA3 519 aa9.17□□□□□ -0.94
RETREG1-202ENST00000399793 C9orf72Q96LT7 481 aa9.17□□□□□ -0.94
RETREG1-202ENST00000399793 NMUR2Q9GZQ4 415 aa9.17□□□□□ -0.94
RETREG1-202ENST00000399793 CLK4Q9HAZ1 481 aaKnown RBP9.17□□□□□ -0.94
RETREG1-202ENST00000399793 VPS51Q9UID3 782 aa9.17□□□□□ -0.94
RETREG1-202ENST00000399793 SMG5Q9UPR3 1016 aaKnown RBP9.17□□□□□ -0.94
RETREG1-202ENST00000399793 MTO1Q9Y2Z2 717 aaKnown RBP9.17□□□□□ -0.94
RETREG1-202ENST00000399793 ATRNO75882 1429 aa9.17□□□□□ -0.94
RETREG1-202ENST00000399793 ATAD5Q96QE3 1844 aa9.17□□□□□ -0.94
RETREG1-202ENST00000399793 UNCXA6NJT0 531 aa9.17□□□□□ -0.94
RETREG1-202ENST00000399793 NOTOA8MTQ0 251 aa9.17□□□□□ -0.94
RETREG1-202ENST00000399793 ZBTB11O95625 1053 aaPredicted RBP9.17□□□□□ -0.94
RETREG1-202ENST00000399793 MCAMP43121 646 aa9.17□□□□□ -0.94
RETREG1-202ENST00000399793 FKBP3Q00688 224 aaKnown RBP9.17□□□□□ -0.94
RETREG1-202ENST00000399793 MTMR2Q13614 643 aa9.17□□□□□ -0.94
RETREG1-202ENST00000399793 UBE3CQ15386 1083 aa9.17□□□□□ -0.94
RETREG1-202ENST00000399793 NANOGP8Q6NSW7 305 aa9.17□□□□□ -0.94
RETREG1-202ENST00000399793 DCLRE1AQ6PJP8 1040 aa9.17□□□□□ -0.94
RETREG1-202ENST00000399793 TOM1L2Q6ZVM7 507 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms