RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 NLRC4Q9NPP4 1024 aa8.95□□□□□ -0.98
CACNA1C-220ENST00000399655 THRAP3Q9Y2W1 955 aaKnown RBP8.95□□□□□ -0.98
CACNA1C-220ENST00000399655 B8ZZF3 427 aa8.95□□□□□ -0.98
CACNA1C-220ENST00000399655 CLPTM1O96005 669 aa8.95□□□□□ -0.98
CACNA1C-220ENST00000399655 ZCCHC18P0CG32 403 aa8.95□□□□□ -0.98
CACNA1C-220ENST00000399655 MYCLP12524 364 aaPredicted RBP8.95□□□□□ -0.98
CACNA1C-220ENST00000399655 ACADSBP45954 432 aa8.95□□□□□ -0.98
CACNA1C-220ENST00000399655 CRKP46108 304 aa8.95□□□□□ -0.98
CACNA1C-220ENST00000399655 RASSF1Q9NS23 344 aa8.95□□□□□ -0.98
CACNA1C-220ENST00000399655 TRPC5OSA6NMA1 111 aa8.94□□□□□ -0.98
CACNA1C-220ENST00000399655 POU5F1BQ06416 359 aa8.94□□□□□ -0.98
CACNA1C-220ENST00000399655 KNOP1Q1ED39 458 aaKnown RBP8.94□□□□□ -0.98
CACNA1C-220ENST00000399655 TSHZ1Q6ZSZ6 1077 aa8.94□□□□□ -0.98
CACNA1C-220ENST00000399655 DPF1Q92782 380 aa8.94□□□□□ -0.98
CACNA1C-220ENST00000399655 TXN2Q99757 166 aa8.94□□□□□ -0.98
CACNA1C-220ENST00000399655 NCAPD3P42695 1498 aa8.94□□□□□ -0.98
CACNA1C-220ENST00000399655 LAD1O00515 517 aa8.94□□□□□ -0.98
CACNA1C-220ENST00000399655 FDPSP14324 419 aaKnown RBP8.94□□□□□ -0.98
CACNA1C-220ENST00000399655 GIMAP8Q8ND71 665 aaPredicted RBP8.94□□□□□ -0.98
CACNA1C-220ENST00000399655 MAFIPQ8WZ33 124 aa8.94□□□□□ -0.98
CACNA1C-220ENST00000399655 SUCLG2Q96I99 432 aa8.94□□□□□ -0.98
CACNA1C-220ENST00000399655 ECSITQ9BQ95 431 aa8.94□□□□□ -0.98
CACNA1C-220ENST00000399655 ARHGEF4Q9NR80 690 aa8.94□□□□□ -0.98
CACNA1C-220ENST00000399655 BUB1O43683 1085 aa8.94□□□□□ -0.98
CACNA1C-220ENST00000399655 GAP43P17677 238 aa8.94□□□□□ -0.98
CACNA1C-220ENST00000399655 STOX1Q6ZVD7 989 aa8.94□□□□□ -0.98
CACNA1C-220ENST00000399655 ZNF786Q8N393 782 aa8.94□□□□□ -0.98
CACNA1C-220ENST00000399655 KLHL32Q96NJ5 620 aa8.94□□□□□ -0.98
CACNA1C-220ENST00000399655 ELOVL6Q9H5J4 265 aa8.94□□□□□ -0.98
CACNA1C-220ENST00000399655 RHPN2P1A8MT19 583 aa8.94□□□□□ -0.98
CACNA1C-220ENST00000399655 PSMD3O43242 534 aa8.94□□□□□ -0.98
CACNA1C-220ENST00000399655 TIPRLO75663 272 aa8.94□□□□□ -0.98
CACNA1C-220ENST00000399655 RPS6KA4O75676 772 aa8.94□□□□□ -0.98
CACNA1C-220ENST00000399655 ATP1A1P05023 1023 aaKnown RBP8.94□□□□□ -0.98
CACNA1C-220ENST00000399655 ATP5F1P24539 256 aaPredicted RBP8.94□□□□□ -0.98
CACNA1C-220ENST00000399655 AXLP30530 894 aa8.94□□□□□ -0.98
CACNA1C-220ENST00000399655 CENPIQ92674 756 aaPredicted RBP8.94□□□□□ -0.98
CACNA1C-220ENST00000399655 PCDHA12Q9UN75 941 aa8.94□□□□□ -0.98
CACNA1C-220ENST00000399655 F8VZ95 297 aa8.94□□□□□ -0.98
CACNA1C-220ENST00000399655 ALDH1A3P47895 512 aa8.94□□□□□ -0.98
CACNA1C-220ENST00000399655 CDH4P55283 916 aa8.94□□□□□ -0.98
CACNA1C-220ENST00000399655 C21orf59P57076 290 aa8.94□□□□□ -0.98
CACNA1C-220ENST00000399655 HIST2H2AA3Q6FI13 130 aa8.94□□□□□ -0.98
CACNA1C-220ENST00000399655 CST11Q9H112 138 aa8.94□□□□□ -0.98
CACNA1C-220ENST00000399655 RMND5AQ9H871 391 aa8.94□□□□□ -0.98
CACNA1C-220ENST00000399655 SETD4Q9NVD3 440 aa8.94□□□□□ -0.98
CACNA1C-220ENST00000399655 ZNF222Q9UK12 451 aa8.94□□□□□ -0.98
CACNA1C-220ENST00000399655 AKAP8O43823 692 aaKnown RBP8.94□□□□□ -0.98
CACNA1C-220ENST00000399655 ALOX5P09917 674 aa8.94□□□□□ -0.98
CACNA1C-220ENST00000399655 TTKP33981 857 aa8.94□□□□□ -0.98
CACNA1C-220ENST00000399655 CLCA4Q14CN2 919 aa8.94□□□□□ -0.98
CACNA1C-220ENST00000399655 BEND5Q7L4P6 421 aa8.94□□□□□ -0.98
CACNA1C-220ENST00000399655 SGSM3Q96HU1 749 aa8.94□□□□□ -0.98
CACNA1C-220ENST00000399655 SP110Q9HB58 689 aa8.94□□□□□ -0.98
CACNA1C-220ENST00000399655 SAE1Q9UBE0 346 aaPredicted RBP8.94□□□□□ -0.98
CACNA1C-220ENST00000399655 RBM8AQ9Y5S9 174 aaKnown RBP8.94□□□□□ -0.98
CACNA1C-220ENST00000399655 TLR2O60603 784 aa8.94□□□□□ -0.98
CACNA1C-220ENST00000399655 PFKFB2O60825 505 aa8.94□□□□□ -0.98
CACNA1C-220ENST00000399655 PGK1P00558 417 aa8.94□□□□□ -0.98
CACNA1C-220ENST00000399655 IL15P40933 162 aaPredicted RBP8.94□□□□□ -0.98
CACNA1C-220ENST00000399655 SLFN5Q08AF3 891 aa8.94□□□□□ -0.98
CACNA1C-220ENST00000399655 RGS21Q2M5E4 152 aa8.94□□□□□ -0.98
CACNA1C-220ENST00000399655 TYW3Q6IPR3 259 aaKnown RBP8.94□□□□□ -0.98
CACNA1C-220ENST00000399655 THEM5Q8N1Q8 247 aa8.94□□□□□ -0.98
CACNA1C-220ENST00000399655 PPP2R3CQ969Q6 453 aa8.94□□□□□ -0.98
CACNA1C-220ENST00000399655 PFDN5Q99471 154 aa8.94□□□□□ -0.98
CACNA1C-220ENST00000399655 PLIN2Q99541 437 aa8.94□□□□□ -0.98
CACNA1C-220ENST00000399655 JMJD4Q9H9V9 463 aa8.94□□□□□ -0.98
CACNA1C-220ENST00000399655 TIMMDC1Q9NPL8 285 aa8.94□□□□□ -0.98
CACNA1C-220ENST00000399655 GINM1Q9NU53 330 aa8.94□□□□□ -0.98
CACNA1C-220ENST00000399655 FHOD1Q9Y613 1164 aa8.94□□□□□ -0.98
CACNA1C-220ENST00000399655 QPRTQ15274 297 aa8.94□□□□□ -0.98
CACNA1C-220ENST00000399655 ABCB5Q2M3G0 1257 aa8.94□□□□□ -0.98
CACNA1C-220ENST00000399655 ANGEL1Q9UNK9 670 aaKnown RBP8.94□□□□□ -0.98
CACNA1C-220ENST00000399655 KIF21BO75037 1637 aa8.94□□□□□ -0.98
CACNA1C-220ENST00000399655 MIF4GDA9UHW6 222 aaKnown RBP8.94□□□□□ -0.98
CACNA1C-220ENST00000399655 TRIM3O75382 744 aaPredicted RBP8.94□□□□□ -0.98
CACNA1C-220ENST00000399655 BIKQ13323 160 aa8.94□□□□□ -0.98
CACNA1C-220ENST00000399655 GNA13Q14344 377 aa8.94□□□□□ -0.98
CACNA1C-220ENST00000399655 ZNF174Q15697 407 aa8.94□□□□□ -0.98
CACNA1C-220ENST00000399655 FAM83BQ5T0W9 1011 aa8.94□□□□□ -0.98
CACNA1C-220ENST00000399655 PRR5LQ6MZQ0 368 aa8.94□□□□□ -0.98
CACNA1C-220ENST00000399655 CASP12Q6UXS9 341 aa8.94□□□□□ -0.98
CACNA1C-220ENST00000399655 PDS5BQ9NTI5 1447 aa8.94□□□□□ -0.98
CACNA1C-220ENST00000399655 APC2O95996 2303 aa8.94□□□□□ -0.98
CACNA1C-220ENST00000399655 RPAP1Q9BWH6 1393 aaPredicted RBP8.94□□□□□ -0.98
CACNA1C-220ENST00000399655 C15orf38-AP3S2A0A0A6YYH1 394 aa8.94□□□□□ -0.98
CACNA1C-220ENST00000399655 P4HBP07237 508 aaKnown RBP8.94□□□□□ -0.98
CACNA1C-220ENST00000399655 SPARCP09486 303 aa8.94□□□□□ -0.98
CACNA1C-220ENST00000399655 LCP1P13796 627 aa8.94□□□□□ -0.98
CACNA1C-220ENST00000399655 RBM43Q6ZSC3 357 aaKnown RBP8.94□□□□□ -0.98
CACNA1C-220ENST00000399655 PCDH19Q8TAB3 1148 aa8.94□□□□□ -0.98
CACNA1C-220ENST00000399655 INTS10Q9NVR2 710 aaKnown RBP8.94□□□□□ -0.98
CACNA1C-220ENST00000399655 MTO1Q9Y2Z2 717 aaKnown RBP8.94□□□□□ -0.98
CACNA1C-220ENST00000399655 DOCK9Q9BZ29 2069 aa8.94□□□□□ -0.98
CACNA1C-220ENST00000399655 SUPT6HQ7KZ85 1726 aaKnown RBP8.94□□□□□ -0.98
CACNA1C-220ENST00000399655 LOC110117498-PIK3R3F6TDL0 507 aa8.93□□□□□ -0.98
CACNA1C-220ENST00000399655 KATNA1O75449 491 aa8.93□□□□□ -0.98
CACNA1C-220ENST00000399655 TMEM63BQ5T3F8 832 aa8.93□□□□□ -0.98
CACNA1C-220ENST00000399655 PIK3R3Q92569 461 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms