RNA–Protein interactions for RNA: ENST00000399644.5

CACNA1C-218, Transcript of calcium voltage-gated channel subunit alpha1 C, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-218	ENST00000399644	TTC13	Q8NBP0	860 aa		11.64	□□□□□ -0.55
CACNA1C-218	ENST00000399644	CNOT6L	Q96LI5	555 aa	Known RBP	11.64	□□□□□ -0.55
CACNA1C-218	ENST00000399644	MRPL4	Q9BYD3	311 aa	Known RBP	11.64	□□□□□ -0.55
CACNA1C-218	ENST00000399644	NEO1	Q92859	1461 aa		11.64	□□□□□ -0.55
CACNA1C-218	ENST00000399644	RASA4B	C9J798	803 aa		11.64	□□□□□ -0.55
CACNA1C-218	ENST00000399644	RASA4	O43374	803 aa		11.64	□□□□□ -0.55
CACNA1C-218	ENST00000399644	PGM3	O95394	542 aa		11.64	□□□□□ -0.55
CACNA1C-218	ENST00000399644	SLC25A27	O95847	323 aa		11.64	□□□□□ -0.55
CACNA1C-218	ENST00000399644	GTF2E2	P29084	291 aa	Known RBP	11.64	□□□□□ -0.55
CACNA1C-218	ENST00000399644	GSS	P48637	474 aa		11.64	□□□□□ -0.55
CACNA1C-218	ENST00000399644	TYW3	Q6IPR3	259 aa	Known RBP	11.64	□□□□□ -0.55
CACNA1C-218	ENST00000399644	TOGARAM2	Q6ZUX3	1019 aa		11.64	□□□□□ -0.55
CACNA1C-218	ENST00000399644	WDR36	Q8NI36	951 aa	Known RBP	11.64	□□□□□ -0.55
CACNA1C-218	ENST00000399644	TBC1D22B	Q9NU19	505 aa		11.64	□□□□□ -0.55
CACNA1C-218	ENST00000399644	C20orf96	Q9NUD7	363 aa	Predicted RBP	11.64	□□□□□ -0.55
CACNA1C-218	ENST00000399644	CD274	Q9NZQ7	290 aa		11.64	□□□□□ -0.55
CACNA1C-218	ENST00000399644	RPS12	P25398	132 aa	Known RBP	11.64	□□□□□ -0.55
CACNA1C-218	ENST00000399644	PDAP1	Q13442	181 aa	Known RBP	11.64	□□□□□ -0.55
CACNA1C-218	ENST00000399644	DCP1B	Q8IZD4	617 aa	Known RBP	11.64	□□□□□ -0.55
CACNA1C-218	ENST00000399644	TNS4	Q8IZW8	715 aa		11.64	□□□□□ -0.55
CACNA1C-218	ENST00000399644	INTS4	Q96HW7	963 aa	Known RBP	11.64	□□□□□ -0.55
CACNA1C-218	ENST00000399644	ADI1	Q9BV57	179 aa		11.64	□□□□□ -0.55
CACNA1C-218	ENST00000399644	MAGEB5	Q9BZ81	275 aa		11.64	□□□□□ -0.55
CACNA1C-218	ENST00000399644	ROGDI	Q9GZN7	287 aa		11.64	□□□□□ -0.55
CACNA1C-218	ENST00000399644	AVEN	Q9NQS1	362 aa	Predicted RBP	11.64	□□□□□ -0.55
CACNA1C-218	ENST00000399644	SPAST	Q9UBP0	616 aa		11.64	□□□□□ -0.55
CACNA1C-218	ENST00000399644	PCDHA6	Q9UN73	950 aa		11.64	□□□□□ -0.55
CACNA1C-218	ENST00000399644	PCDHA8	Q9Y5H6	950 aa		11.64	□□□□□ -0.55
CACNA1C-218	ENST00000399644	KDM5C	P41229	1560 aa		11.63	□□□□□ -0.55
CACNA1C-218	ENST00000399644	PDZK1P1	A8MUH7	402 aa		11.63	□□□□□ -0.55
CACNA1C-218	ENST00000399644	C4BPB	P20851	252 aa		11.63	□□□□□ -0.55
CACNA1C-218	ENST00000399644	SRP54	P61011	504 aa	Known RBP	11.63	□□□□□ -0.55
CACNA1C-218	ENST00000399644	NFIX	Q14938	502 aa		11.63	□□□□□ -0.55
CACNA1C-218	ENST00000399644	PCSK7	Q16549	785 aa		11.63	□□□□□ -0.55
CACNA1C-218	ENST00000399644	SHCBP1	Q8NEM2	672 aa		11.63	□□□□□ -0.55
CACNA1C-218	ENST00000399644	RUNDC3B	Q96NL0	473 aa		11.63	□□□□□ -0.55
CACNA1C-218	ENST00000399644	EMILIN2	Q9BXX0	1053 aa		11.63	□□□□□ -0.55
CACNA1C-218	ENST00000399644	PIF1	Q9H611	641 aa		11.63	□□□□□ -0.55
CACNA1C-218	ENST00000399644	SCAF8	Q9UPN6	1271 aa	Known RBP	11.63	□□□□□ -0.55
CACNA1C-218	ENST00000399644	POLR1D	Q9Y2S0	133 aa		11.63	□□□□□ -0.55
CACNA1C-218	ENST00000399644		A0A1W2PRG6	482 aa		11.63	□□□□□ -0.55
CACNA1C-218	ENST00000399644	SMCO3	A2RU48	225 aa		11.63	□□□□□ -0.55
CACNA1C-218	ENST00000399644	STXBP1	P61764	594 aa	Known RBP	11.63	□□□□□ -0.55
CACNA1C-218	ENST00000399644	STX3	Q13277	289 aa		11.63	□□□□□ -0.55
CACNA1C-218	ENST00000399644	KLHL12	Q53G59	568 aa		11.63	□□□□□ -0.55
CACNA1C-218	ENST00000399644	ZNF274	Q96GC6	653 aa	Predicted RBP	11.63	□□□□□ -0.55
CACNA1C-218	ENST00000399644	PPP1R13B	Q96KQ4	1090 aa		11.63	□□□□□ -0.55
CACNA1C-218	ENST00000399644	FAM217B	Q9NTX9	383 aa	Predicted RBP	11.63	□□□□□ -0.55
CACNA1C-218	ENST00000399644	PARVA	Q9NVD7	372 aa		11.63	□□□□□ -0.55
CACNA1C-218	ENST00000399644	ZNF624	Q9P2J8	865 aa	Predicted RBP	11.63	□□□□□ -0.55
CACNA1C-218	ENST00000399644	FBXO10	Q9UK96	956 aa		11.63	□□□□□ -0.55
CACNA1C-218	ENST00000399644	AATK	Q6ZMQ8	1374 aa		11.63	□□□□□ -0.55
CACNA1C-218	ENST00000399644	JAK2	O60674	1132 aa		11.63	□□□□□ -0.55
CACNA1C-218	ENST00000399644	CCT3	P49368	545 aa	Known RBP	11.63	□□□□□ -0.55
CACNA1C-218	ENST00000399644	NME5	P56597	212 aa		11.63	□□□□□ -0.55
CACNA1C-218	ENST00000399644	NLRP11	P59045	1033 aa	Known RBP	11.63	□□□□□ -0.55
CACNA1C-218	ENST00000399644	NDUFA5	Q16718	116 aa		11.63	□□□□□ -0.55
CACNA1C-218	ENST00000399644	STAP1	Q9ULZ2	295 aa		11.63	□□□□□ -0.55
CACNA1C-218	ENST00000399644	ZMYM6	O95789	1325 aa		11.63	□□□□□ -0.55
CACNA1C-218	ENST00000399644		H7C4K7	107 aa		11.63	□□□□□ -0.55
CACNA1C-218	ENST00000399644	TRIM49	P0CI25	452 aa		11.63	□□□□□ -0.55
CACNA1C-218	ENST00000399644	TRIM49C	P0CI26	452 aa		11.63	□□□□□ -0.55
CACNA1C-218	ENST00000399644	NR2F2	P24468	414 aa		11.63	□□□□□ -0.55
CACNA1C-218	ENST00000399644	ABAT	P80404	500 aa		11.63	□□□□□ -0.55
CACNA1C-218	ENST00000399644	ZNF284	Q2VY69	593 aa		11.63	□□□□□ -0.55
CACNA1C-218	ENST00000399644	GATAD2A	Q86YP4	633 aa		11.63	□□□□□ -0.55
CACNA1C-218	ENST00000399644	EPHX4	Q8IUS5	362 aa		11.63	□□□□□ -0.55
CACNA1C-218	ENST00000399644	FAM9C	Q8IZT9	166 aa		11.63	□□□□□ -0.55
CACNA1C-218	ENST00000399644	SPATA16	Q9BXB7	569 aa		11.63	□□□□□ -0.55
CACNA1C-218	ENST00000399644	ELL3	Q9HB65	397 aa	Predicted RBP	11.63	□□□□□ -0.55
CACNA1C-218	ENST00000399644	MRPL47	Q9HD33	250 aa	Known RBP	11.63	□□□□□ -0.55
CACNA1C-218	ENST00000399644	CAMSAP3	Q9P1Y5	1249 aa	Predicted RBP	11.63	□□□□□ -0.55
CACNA1C-218	ENST00000399644	MID2	Q9UJV3	735 aa		11.63	□□□□□ -0.55
CACNA1C-218	ENST00000399644	HAUS5	O94927	633 aa		11.63	□□□□□ -0.55
CACNA1C-218	ENST00000399644	AP3B2	Q13367	1082 aa		11.63	□□□□□ -0.55
CACNA1C-218	ENST00000399644	MAPK11	Q15759	364 aa		11.63	□□□□□ -0.55
CACNA1C-218	ENST00000399644	KYAT1	Q16773	422 aa		11.63	□□□□□ -0.55
CACNA1C-218	ENST00000399644	ANKAR	Q7Z5J8	1434 aa		11.63	□□□□□ -0.55
CACNA1C-218	ENST00000399644	ANKMY2	Q8IV38	441 aa		11.63	□□□□□ -0.55
CACNA1C-218	ENST00000399644	SPATA18	Q8TC71	538 aa		11.63	□□□□□ -0.55
CACNA1C-218	ENST00000399644	FAM129A	Q9BZQ8	928 aa		11.63	□□□□□ -0.55
CACNA1C-218	ENST00000399644	PCSK1N	Q9UHG2	260 aa		11.63	□□□□□ -0.55
CACNA1C-218	ENST00000399644	NUDT14	O95848	222 aa		11.62	□□□□□ -0.55
CACNA1C-218	ENST00000399644	NCAM1	P13591	858 aa		11.62	□□□□□ -0.55
CACNA1C-218	ENST00000399644	HPGD	P15428	266 aa		11.62	□□□□□ -0.55
CACNA1C-218	ENST00000399644	RHAG	Q02094	409 aa		11.62	□□□□□ -0.55
CACNA1C-218	ENST00000399644	INPP5A	Q14642	412 aa		11.62	□□□□□ -0.55
CACNA1C-218	ENST00000399644	UBE3C	Q15386	1083 aa		11.62	□□□□□ -0.55
CACNA1C-218	ENST00000399644	TRIM16L	Q309B1	348 aa		11.62	□□□□□ -0.55
CACNA1C-218	ENST00000399644	PGS1	Q32NB8	556 aa		11.62	□□□□□ -0.55
CACNA1C-218	ENST00000399644	RABL6	Q3YEC7	729 aa	Predicted RBP	11.62	□□□□□ -0.55
CACNA1C-218	ENST00000399644	SNX30	Q5VWJ9	437 aa		11.62	□□□□□ -0.55
CACNA1C-218	ENST00000399644	COLGALT2	Q8IYK4	626 aa		11.62	□□□□□ -0.55
CACNA1C-218	ENST00000399644	SHCBP1L	Q9BZQ2	653 aa		11.62	□□□□□ -0.55
CACNA1C-218	ENST00000399644	POLR3F	Q9H1D9	316 aa	Predicted RBP	11.62	□□□□□ -0.55
CACNA1C-218	ENST00000399644	SENP2	Q9HC62	589 aa		11.62	□□□□□ -0.55
CACNA1C-218	ENST00000399644	ING3	Q9NXR8	418 aa		11.62	□□□□□ -0.55
CACNA1C-218	ENST00000399644	IMPACT	Q9P2X3	320 aa		11.62	□□□□□ -0.55
CACNA1C-218	ENST00000399644	FKTN	O75072	461 aa		11.62	□□□□□ -0.55
CACNA1C-218	ENST00000399644	CACTIN-AS1	Q8N1I8	211 aa		11.62	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms