RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 TMEM260Q9NX78 707 aa11.49□□□□□ -0.57
CACNA1C-216ENST00000399638 RNF14Q9UBS8 474 aa11.49□□□□□ -0.57
CACNA1C-216ENST00000399638 GSNP06396 782 aa11.48□□□□□ -0.57
CACNA1C-216ENST00000399638 PDHA1P08559 390 aa11.48□□□□□ -0.57
CACNA1C-216ENST00000399638 YWHABP31946 246 aaKnown RBP11.48□□□□□ -0.57
CACNA1C-216ENST00000399638 TFDP2Q14188 446 aa11.48□□□□□ -0.57
CACNA1C-216ENST00000399638 SGO1Q5FBB7 561 aa11.48□□□□□ -0.57
CACNA1C-216ENST00000399638 COLEC12Q5KU26 742 aa11.48□□□□□ -0.57
CACNA1C-216ENST00000399638 SCFD2Q8WU76 684 aa11.48□□□□□ -0.57
CACNA1C-216ENST00000399638 AGAP3Q96P47 875 aa11.48□□□□□ -0.57
CACNA1C-216ENST00000399638 PDE11AQ9HCR9 933 aa11.48□□□□□ -0.57
CACNA1C-216ENST00000399638 NUDT14O95848 222 aa11.48□□□□□ -0.57
CACNA1C-216ENST00000399638 GRK3P35626 688 aa11.48□□□□□ -0.57
CACNA1C-216ENST00000399638 HERC6Q8IVU3 1022 aa11.48□□□□□ -0.57
CACNA1C-216ENST00000399638 FAM167BQ9BTA0 163 aa11.48□□□□□ -0.57
CACNA1C-216ENST00000399638 HEMGNQ9BXL5 484 aa11.48□□□□□ -0.57
CACNA1C-216ENST00000399638 PARD6BQ9BYG5 372 aa11.48□□□□□ -0.57
CACNA1C-216ENST00000399638 PLEKHG2Q9H7P9 1386 aa11.48□□□□□ -0.57
CACNA1C-216ENST00000399638 LRRC14BA6NHZ5 514 aa11.48□□□□□ -0.57
CACNA1C-216ENST00000399638 GUCY2DQ02846 1103 aa11.48□□□□□ -0.57
CACNA1C-216ENST00000399638 CDC16Q13042 620 aa11.48□□□□□ -0.57
CACNA1C-216ENST00000399638 IKBKEQ14164 716 aa11.48□□□□□ -0.57
CACNA1C-216ENST00000399638 TRIM69Q86WT6 500 aa11.48□□□□□ -0.57
CACNA1C-216ENST00000399638 ATP6V0D2Q8N8Y2 350 aa11.48□□□□□ -0.57
CACNA1C-216ENST00000399638 XXYLT1Q8NBI6 393 aa11.48□□□□□ -0.57
CACNA1C-216ENST00000399638 RNASE11Q8TAA1 199 aaKnown RBP11.48□□□□□ -0.57
CACNA1C-216ENST00000399638 ZNF512BQ96KM6 892 aaPredicted RBP11.48□□□□□ -0.57
CACNA1C-216ENST00000399638 XPNPEP3Q9NQH7 507 aa11.48□□□□□ -0.57
CACNA1C-216ENST00000399638 USP32Q8NFA0 1604 aa11.48□□□□□ -0.57
CACNA1C-216ENST00000399638 CYP7B1O75881 506 aa11.48□□□□□ -0.57
CACNA1C-216ENST00000399638 AARSP49588 968 aaKnown RBP eCLIP11.48□□□□□ -0.57
CACNA1C-216ENST00000399638 ATP12AP54707 1039 aa11.48□□□□□ -0.57
CACNA1C-216ENST00000399638 MARSP56192 900 aaKnown RBP11.48□□□□□ -0.57
CACNA1C-216ENST00000399638 SENP7Q9BQF6 1050 aa11.48□□□□□ -0.57
CACNA1C-216ENST00000399638 TRPM5Q9NZQ8 1165 aa11.48□□□□□ -0.57
CACNA1C-216ENST00000399638 TNFSF13BQ9Y275 285 aa11.48□□□□□ -0.57
CACNA1C-216ENST00000399638 SPHKAPQ2M3C7 1700 aa11.48□□□□□ -0.57
CACNA1C-216ENST00000399638 LRRIQ1Q96JM4 1722 aa11.48□□□□□ -0.57
CACNA1C-216ENST00000399638 ARF3P61204 181 aaPredicted RBP11.48□□□□□ -0.57
CACNA1C-216ENST00000399638 ARF1P84077 181 aaKnown RBP11.48□□□□□ -0.57
CACNA1C-216ENST00000399638 HDLBPQ00341 1268 aaKnown RBP11.48□□□□□ -0.57
CACNA1C-216ENST00000399638 NECTIN1Q15223 517 aa11.48□□□□□ -0.57
CACNA1C-216ENST00000399638 ZNF284Q2VY69 593 aa11.48□□□□□ -0.57
CACNA1C-216ENST00000399638 TSGA10IPQ3SY00 556 aa11.48□□□□□ -0.57
CACNA1C-216ENST00000399638 ARSJQ5FYB0 599 aaPredicted RBP11.48□□□□□ -0.57
CACNA1C-216ENST00000399638 C11orf70Q9BRQ4 267 aa11.48□□□□□ -0.57
CACNA1C-216ENST00000399638 GLIS2Q9BZE0 524 aaPredicted RBP11.48□□□□□ -0.57
CACNA1C-216ENST00000399638 UBAP1Q9NZ09 502 aa11.48□□□□□ -0.57
CACNA1C-216ENST00000399638 TARSL2A2RTX5 802 aaKnown RBP11.47□□□□□ -0.57
CACNA1C-216ENST00000399638 APOL1O14791 398 aa11.47□□□□□ -0.57
CACNA1C-216ENST00000399638 DAB1O75553 588 aa11.47□□□□□ -0.57
CACNA1C-216ENST00000399638 ROR1Q01973 937 aa11.47□□□□□ -0.57
CACNA1C-216ENST00000399638 C11orf57Q6ZUT1 292 aaPredicted RBP11.47□□□□□ -0.57
CACNA1C-216ENST00000399638 SRLQ86TD4 932 aa11.47□□□□□ -0.57
CACNA1C-216ENST00000399638 PDIK1LQ8N165 341 aa11.47□□□□□ -0.57
CACNA1C-216ENST00000399638 FAM161BQ96MY7 647 aa11.47□□□□□ -0.57
CACNA1C-216ENST00000399638 UBE2OQ9C0C9 1292 aaKnown RBP11.47□□□□□ -0.57
CACNA1C-216ENST00000399638 BRD8Q9H0E9 1235 aa11.47□□□□□ -0.57
CACNA1C-216ENST00000399638 PRR12Q9ULL5 1215 aa11.47□□□□□ -0.57
CACNA1C-216ENST00000399638 PNMA8BQ9ULN7 279 aaPredicted RBP11.47□□□□□ -0.57
CACNA1C-216ENST00000399638 FHOD1Q9Y613 1164 aa11.47□□□□□ -0.57
CACNA1C-216ENST00000399638 AMD1P17707 334 aa11.47□□□□□ -0.57
CACNA1C-216ENST00000399638 ARHGAP17Q68EM7 881 aa11.47□□□□□ -0.57
CACNA1C-216ENST00000399638 ACAD11Q709F0 780 aa11.47□□□□□ -0.57
CACNA1C-216ENST00000399638 SFR1Q86XK3 245 aa11.47□□□□□ -0.57
CACNA1C-216ENST00000399638 TBC1D16Q8TBP0 767 aa11.47□□□□□ -0.57
CACNA1C-216ENST00000399638 YIPF3Q9GZM5 350 aa11.47□□□□□ -0.57
CACNA1C-216ENST00000399638 PUS7LQ9H0K6 701 aaKnown RBP11.47□□□□□ -0.57
CACNA1C-216ENST00000399638 FOXP1Q9H334 677 aaPredicted RBP11.47□□□□□ -0.57
CACNA1C-216ENST00000399638 NMRK2Q9NPI5 230 aa11.47□□□□□ -0.57
CACNA1C-216ENST00000399638 EXOC1LA0A1B0GW35 172 aa11.47□□□□□ -0.57
CACNA1C-216ENST00000399638 F5H5T6 163 aa11.47□□□□□ -0.57
CACNA1C-216ENST00000399638 ASAP2O43150 1006 aa11.47□□□□□ -0.57
CACNA1C-216ENST00000399638 FGFR2P21802 821 aa11.47□□□□□ -0.57
CACNA1C-216ENST00000399638 PLTPP55058 493 aa11.47□□□□□ -0.57
CACNA1C-216ENST00000399638 NLRP11P59045 1033 aaKnown RBP11.47□□□□□ -0.57
CACNA1C-216ENST00000399638 FKBP3Q00688 224 aaKnown RBP11.47□□□□□ -0.57
CACNA1C-216ENST00000399638 ALDH6A1Q02252 535 aaKnown RBP11.47□□□□□ -0.57
CACNA1C-216ENST00000399638 RBM43Q6ZSC3 357 aaKnown RBP11.47□□□□□ -0.57
CACNA1C-216ENST00000399638 COMMD2Q86X83 199 aa11.47□□□□□ -0.57
CACNA1C-216ENST00000399638 MMGT1Q8N4V1 131 aa11.47□□□□□ -0.57
CACNA1C-216ENST00000399638 HNRNPLLQ8WVV9 542 aaKnown RBP11.47□□□□□ -0.57
CACNA1C-216ENST00000399638 PLEKHA8Q96JA3 519 aa11.47□□□□□ -0.57
CACNA1C-216ENST00000399638 CATSPERBQ9H7T0 1116 aa11.47□□□□□ -0.57
CACNA1C-216ENST00000399638 TLR7Q9NYK1 1049 aaKnown RBP11.47□□□□□ -0.57
CACNA1C-216ENST00000399638 SNX6Q9UNH7 406 aa11.47□□□□□ -0.57
CACNA1C-216ENST00000399638 AXIN2Q9Y2T1 843 aa11.47□□□□□ -0.57
CACNA1C-216ENST00000399638 KPNA7A9QM74 516 aa11.47□□□□□ -0.57
CACNA1C-216ENST00000399638 MAN2A1Q16706 1144 aa11.47□□□□□ -0.57
CACNA1C-216ENST00000399638 TLK2Q86UE8 772 aa11.47□□□□□ -0.57
CACNA1C-216ENST00000399638 OR9Q1Q8NGQ5 310 aa11.47□□□□□ -0.57
CACNA1C-216ENST00000399638 LPAR1Q92633 364 aa11.47□□□□□ -0.57
CACNA1C-216ENST00000399638 MED15Q96RN5 788 aa11.47□□□□□ -0.57
CACNA1C-216ENST00000399638 ATP6V1HQ9UI12 483 aa11.47□□□□□ -0.57
CACNA1C-216ENST00000399638 MAFFQ9ULX9 164 aa11.47□□□□□ -0.57
CACNA1C-216ENST00000399638 ADGRA2Q96PE1 1338 aa11.47□□□□□ -0.57
CACNA1C-216ENST00000399638 USP42Q9H9J4 1324 aaKnown RBP11.47□□□□□ -0.57
CACNA1C-216ENST00000399638 HEATR9A2RTY3 570 aa11.47□□□□□ -0.57
CACNA1C-216ENST00000399638 TADA3O75528 432 aa11.47□□□□□ -0.57
CACNA1C-216ENST00000399638 ITGAXP20702 1163 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms