RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 CD99L2Q8TCZ2 262 aa8.35□□□□□ -1.07
USP47-203ENST00000399455 DESI2Q9BSY9 194 aa8.35□□□□□ -1.07
USP47-203ENST00000399455 CASS4Q9NQ75 786 aa8.35□□□□□ -1.07
USP47-203ENST00000399455 SLC39A10Q9ULF5 831 aa8.35□□□□□ -1.07
USP47-203ENST00000399455 UMODL1Q5DID0 1318 aa8.35□□□□□ -1.07
USP47-203ENST00000399455 MED1Q15648 1581 aaPredicted RBP8.35□□□□□ -1.07
USP47-203ENST00000399455 TLR2O60603 784 aa8.35□□□□□ -1.07
USP47-203ENST00000399455 LY6KQ17RY6 165 aa8.35□□□□□ -1.07
USP47-203ENST00000399455 GLE1Q53GS7 698 aaKnown RBP8.35□□□□□ -1.07
USP47-203ENST00000399455 FAM171A1Q5VUB5 890 aa8.35□□□□□ -1.07
USP47-203ENST00000399455 CYP4F22Q6NT55 531 aa8.35□□□□□ -1.07
USP47-203ENST00000399455 ZMYND12Q9H0C1 365 aa8.35□□□□□ -1.07
USP47-203ENST00000399455 PCDH8O95206 1070 aa8.35□□□□□ -1.07
USP47-203ENST00000399455 PTPRAP18433 802 aa8.35□□□□□ -1.07
USP47-203ENST00000399455 DDR1Q08345 913 aa8.35□□□□□ -1.07
USP47-203ENST00000399455 PDK1Q15118 436 aa8.35□□□□□ -1.07
USP47-203ENST00000399455 FASTKD1Q53R41 847 aaKnown RBP8.35□□□□□ -1.07
USP47-203ENST00000399455 CATSPERGQ6ZRH7 1159 aa8.35□□□□□ -1.07
USP47-203ENST00000399455 RBBP8NLQ8NC74 664 aaPredicted RBP8.35□□□□□ -1.07
USP47-203ENST00000399455 PLEKHA4Q9H4M7 779 aa8.35□□□□□ -1.07
USP47-203ENST00000399455 RSAD1Q9HA92 442 aa8.35□□□□□ -1.07
USP47-203ENST00000399455 ITIH6Q6UXX5 1313 aa8.35□□□□□ -1.07
USP47-203ENST00000399455 MAPK13O15264 365 aa8.35□□□□□ -1.07
USP47-203ENST00000399455 OGTO15294 1046 aa8.35□□□□□ -1.07
USP47-203ENST00000399455 TOMM70O94826 608 aa8.35□□□□□ -1.07
USP47-203ENST00000399455 GHRP10912 638 aa8.35□□□□□ -1.07
USP47-203ENST00000399455 GPD1P21695 349 aa8.35□□□□□ -1.07
USP47-203ENST00000399455 KRT31Q15323 416 aa8.35□□□□□ -1.07
USP47-203ENST00000399455 PID1Q7Z2X4 250 aa8.35□□□□□ -1.07
USP47-203ENST00000399455 RGL4Q8IZJ4 473 aa8.35□□□□□ -1.07
USP47-203ENST00000399455 CALML6Q8TD86 181 aa8.35□□□□□ -1.07
USP47-203ENST00000399455 EFHD1Q9BUP0 239 aa8.35□□□□□ -1.07
USP47-203ENST00000399455 IDI2Q9BXS1 227 aa8.35□□□□□ -1.07
USP47-203ENST00000399455 WDCPQ9H6R7 721 aa8.35□□□□□ -1.07
USP47-203ENST00000399455 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.35□□□□□ -1.07
USP47-203ENST00000399455 TEKT2Q9UIF3 430 aa8.35□□□□□ -1.07
USP47-203ENST00000399455 TBC1D12O60347 775 aa8.35□□□□□ -1.07
USP47-203ENST00000399455 GUCY2DQ02846 1103 aa8.35□□□□□ -1.07
USP47-203ENST00000399455 PTRHD1Q6GMV3 140 aaKnown RBP8.35□□□□□ -1.07
USP47-203ENST00000399455 SNX31Q8N9S9 440 aa8.35□□□□□ -1.07
USP47-203ENST00000399455 SLC20A1Q8WUM9 679 aa8.35□□□□□ -1.07
USP47-203ENST00000399455 AGPAT1Q99943 283 aa8.35□□□□□ -1.07
USP47-203ENST00000399455 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.35□□□□□ -1.07
USP47-203ENST00000399455 LRRIQ3A6PVS8 624 aaPredicted RBP8.34□□□□□ -1.07
USP47-203ENST00000399455 MCF2P10911 925 aa8.34□□□□□ -1.07
USP47-203ENST00000399455 TRIP13Q15645 432 aaPredicted RBP8.34□□□□□ -1.07
USP47-203ENST00000399455 NIPA1Q7RTP0 329 aa8.34□□□□□ -1.07
USP47-203ENST00000399455 SPG21Q9NZD8 308 aa8.34□□□□□ -1.07
USP47-203ENST00000399455 STX18Q9P2W9 335 aaKnown RBP8.34□□□□□ -1.07
USP47-203ENST00000399455 LGALS16A8MUM7 142 aa8.34□□□□□ -1.07
USP47-203ENST00000399455 GTF2H1P32780 548 aa8.34□□□□□ -1.07
USP47-203ENST00000399455 ART3Q13508 389 aa8.34□□□□□ -1.07
USP47-203ENST00000399455 BYSLQ13895 437 aaKnown RBP8.34□□□□□ -1.07
USP47-203ENST00000399455 PLCL1Q15111 1095 aa8.34□□□□□ -1.07
USP47-203ENST00000399455 C4orf22Q6V702 233 aa8.34□□□□□ -1.07
USP47-203ENST00000399455 PDZD8Q8NEN9 1154 aa8.34□□□□□ -1.07
USP47-203ENST00000399455 REPS2Q8NFH8 660 aa8.34□□□□□ -1.07
USP47-203ENST00000399455 ARL8AQ96BM9 186 aa8.34□□□□□ -1.07
USP47-203ENST00000399455 GDAP1L1Q96MZ0 367 aa8.34□□□□□ -1.07
USP47-203ENST00000399455 C7orf25Q9BPX7 421 aa8.34□□□□□ -1.07
USP47-203ENST00000399455 TUBB6Q9BUF5 446 aa8.34□□□□□ -1.07
USP47-203ENST00000399455 TAF1DQ9H5J8 278 aaPredicted RBP8.34□□□□□ -1.07
USP47-203ENST00000399455 NDUFAB1O14561 156 aa8.34□□□□□ -1.07
USP47-203ENST00000399455 RPA1P27694 616 aa8.34□□□□□ -1.07
USP47-203ENST00000399455 CLCN3P51790 818 aa8.34□□□□□ -1.07
USP47-203ENST00000399455 LAMTOR4Q0VGL1 99 aa8.34□□□□□ -1.07
USP47-203ENST00000399455 CAPRIN1Q14444 709 aaKnown RBP8.34□□□□□ -1.07
USP47-203ENST00000399455 C11orf57Q6ZUT1 292 aaPredicted RBP8.34□□□□□ -1.07
USP47-203ENST00000399455 TBC1D1Q86TI0 1168 aaPredicted RBP8.34□□□□□ -1.07
USP47-203ENST00000399455 HS6ST3Q8IZP7 471 aa8.34□□□□□ -1.07
USP47-203ENST00000399455 RSRC1Q96IZ7 334 aaKnown RBP8.34□□□□□ -1.07
USP47-203ENST00000399455 KRT82Q9NSB4 513 aa8.34□□□□□ -1.07
USP47-203ENST00000399455 FAM49BQ9NUQ9 324 aa8.34□□□□□ -1.07
USP47-203ENST00000399455 CASTOR2A6NHX0 329 aa8.34□□□□□ -1.07
USP47-203ENST00000399455 C2orf81A6NN90 581 aa8.34□□□□□ -1.07
USP47-203ENST00000399455 DTNBO60941 627 aa8.34□□□□□ -1.07
USP47-203ENST00000399455 F9P00740 461 aa8.34□□□□□ -1.07
USP47-203ENST00000399455 RHOCP08134 193 aa8.34□□□□□ -1.07
USP47-203ENST00000399455 SREBF1P36956 1147 aa8.34□□□□□ -1.07
USP47-203ENST00000399455 INPP1P49441 399 aa8.34□□□□□ -1.07
USP47-203ENST00000399455 TGM3Q08188 693 aa8.34□□□□□ -1.07
USP47-203ENST00000399455 KCNA1Q09470 495 aa8.34□□□□□ -1.07
USP47-203ENST00000399455 AARS2Q5JTZ9 985 aaKnown RBP8.34□□□□□ -1.07
USP47-203ENST00000399455 ACAD11Q709F0 780 aa8.34□□□□□ -1.07
USP47-203ENST00000399455 MCCC1Q96RQ3 725 aaPredicted RBP8.34□□□□□ -1.07
USP47-203ENST00000399455 OSMRQ99650 979 aa8.34□□□□□ -1.07
USP47-203ENST00000399455 CIPCQ9C0C6 399 aa8.34□□□□□ -1.07
USP47-203ENST00000399455 CRLS1Q9UJA2 301 aa8.34□□□□□ -1.07
USP47-203ENST00000399455 MRFAP1Q9Y605 127 aa8.34□□□□□ -1.07
USP47-203ENST00000399455 FAM47DPA6NHR8 397 aa8.34□□□□□ -1.07
USP47-203ENST00000399455 MEI4A8MW99 385 aa8.34□□□□□ -1.07
USP47-203ENST00000399455 RAB30Q15771 203 aa8.34□□□□□ -1.07
USP47-203ENST00000399455 SLC26A7Q8TE54 656 aa8.34□□□□□ -1.07
USP47-203ENST00000399455 CCSER1Q9C0I3 900 aa8.34□□□□□ -1.07
USP47-203ENST00000399455 C11orf49Q9H6J7 331 aa8.34□□□□□ -1.07
USP47-203ENST00000399455 ASAH2Q9NR71 780 aa8.34□□□□□ -1.07
USP47-203ENST00000399455 FBXO28Q9NVF7 368 aa8.34□□□□□ -1.07
USP47-203ENST00000399455 APEX2Q9UBZ4 518 aa8.34□□□□□ -1.07
USP47-203ENST00000399455 TRIM33Q9UPN9 1127 aa8.34□□□□□ -1.07
USP47-203ENST00000399455 PHF20L1A8MW92 1017 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms