RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 SPATA20Q8TB22 786 aa15.19■□□□□ 0.02
HLA-DQB1-202ENST00000399079 ZNF516Q92618 1163 aa15.19■□□□□ 0.02
HLA-DQB1-202ENST00000399079 MFSD14AQ96MC6 490 aa15.19■□□□□ 0.02
HLA-DQB1-202ENST00000399079 ZNF560Q96MR9 790 aa15.19■□□□□ 0.02
HLA-DQB1-202ENST00000399079 TMEM209Q96SK2 561 aa15.19■□□□□ 0.02
HLA-DQB1-202ENST00000399079 EPHX3Q9H6B9 360 aa15.19■□□□□ 0.02
HLA-DQB1-202ENST00000399079 PIDD1Q9HB75 910 aa15.19■□□□□ 0.02
HLA-DQB1-202ENST00000399079 POLIQ9UNA4 740 aa15.19■□□□□ 0.02
HLA-DQB1-202ENST00000399079 TRAF3IP3Q9Y228 551 aa15.19■□□□□ 0.02
HLA-DQB1-202ENST00000399079 KINO60870 393 aaKnown RBP15.18■□□□□ 0.02
HLA-DQB1-202ENST00000399079 KIF20AO95235 890 aa15.18■□□□□ 0.02
HLA-DQB1-202ENST00000399079 PAPLNO95428 1278 aa15.18■□□□□ 0.02
HLA-DQB1-202ENST00000399079 TNNC2P02585 160 aa15.18■□□□□ 0.02
HLA-DQB1-202ENST00000399079 CYP11A1P05108 521 aa15.18■□□□□ 0.02
HLA-DQB1-202ENST00000399079 RBP5P82980 135 aa15.18■□□□□ 0.02
HLA-DQB1-202ENST00000399079 ADCY1Q08828 1119 aa15.18■□□□□ 0.02
HLA-DQB1-202ENST00000399079 ISM2Q6H9L7 571 aa15.18■□□□□ 0.02
HLA-DQB1-202ENST00000399079 RNF19BQ6ZMZ0 732 aa15.18■□□□□ 0.02
HLA-DQB1-202ENST00000399079 CCDC149Q6ZUS6 474 aa15.18■□□□□ 0.02
HLA-DQB1-202ENST00000399079 TRAPPC11Q7Z392 1133 aa15.18■□□□□ 0.02
HLA-DQB1-202ENST00000399079 SLC9A9Q8IVB4 645 aa15.18■□□□□ 0.02
HLA-DQB1-202ENST00000399079 SMARCE1Q969G3 411 aa15.18■□□□□ 0.02
HLA-DQB1-202ENST00000399079 PGLYRP2Q96PD5 576 aa15.18■□□□□ 0.02
HLA-DQB1-202ENST00000399079 GSDMAQ96QA5 445 aa15.18■□□□□ 0.02
HLA-DQB1-202ENST00000399079 CGRRF1Q99675 332 aa15.18■□□□□ 0.02
HLA-DQB1-202ENST00000399079 CYP4F11Q9HBI6 524 aa15.18■□□□□ 0.02
HLA-DQB1-202ENST00000399079 WDR6Q9NNW5 1121 aaKnown RBP15.18■□□□□ 0.02
HLA-DQB1-202ENST00000399079 MUTYHQ9UIF7 546 aa15.18■□□□□ 0.02
HLA-DQB1-202ENST00000399079 PRRG1O14668 218 aa15.17■□□□□ 0.02
HLA-DQB1-202ENST00000399079 N4BP1O75113 896 aaKnown RBP15.17■□□□□ 0.02
HLA-DQB1-202ENST00000399079 PRPF40AO75400 957 aaKnown RBP15.17■□□□□ 0.02
HLA-DQB1-202ENST00000399079 SMC2O95347 1197 aa15.17■□□□□ 0.02
HLA-DQB1-202ENST00000399079 VNN2O95498 520 aa15.17■□□□□ 0.02
HLA-DQB1-202ENST00000399079 CST3P01034 146 aaPredicted RBP15.17■□□□□ 0.02
HLA-DQB1-202ENST00000399079 PAX3P23760 479 aa15.17■□□□□ 0.02
HLA-DQB1-202ENST00000399079 ELF1P32519 619 aa15.17■□□□□ 0.02
HLA-DQB1-202ENST00000399079 PNPLA4P41247 253 aa15.17■□□□□ 0.02
HLA-DQB1-202ENST00000399079 PRCPP42785 496 aa15.17■□□□□ 0.02
HLA-DQB1-202ENST00000399079 NTHL1P78549 312 aa15.17■□□□□ 0.02
HLA-DQB1-202ENST00000399079 BFSP1Q12934 665 aa15.17■□□□□ 0.02
HLA-DQB1-202ENST00000399079 UVSSAQ2YD98 709 aa15.17■□□□□ 0.02
HLA-DQB1-202ENST00000399079 CEP135Q66GS9 1140 aa15.17■□□□□ 0.02
HLA-DQB1-202ENST00000399079 GRASPQ7Z6J2 395 aaPredicted RBP15.17■□□□□ 0.02
HLA-DQB1-202ENST00000399079 LRRC52Q8N7C0 313 aa15.17■□□□□ 0.02
HLA-DQB1-202ENST00000399079 OR10T2Q8NGX3 314 aa15.17■□□□□ 0.02
HLA-DQB1-202ENST00000399079 PARD3BQ8TEW8 1205 aa15.17■□□□□ 0.02
HLA-DQB1-202ENST00000399079 TMEM174Q8WUU8 243 aa15.17■□□□□ 0.02
HLA-DQB1-202ENST00000399079 EEF2KMTQ96G04 330 aa15.17■□□□□ 0.02
HLA-DQB1-202ENST00000399079 RTP3Q9BQQ7 232 aa15.17■□□□□ 0.02
HLA-DQB1-202ENST00000399079 RMND1Q9NWS8 449 aa15.17■□□□□ 0.02
HLA-DQB1-202ENST00000399079 HCFC1R1Q9NWW0 138 aa15.17■□□□□ 0.02
HLA-DQB1-202ENST00000399079 NR2E1Q9Y466 385 aa15.17■□□□□ 0.02
HLA-DQB1-202ENST00000399079 LRRIQ3A6PVS8 624 aaPredicted RBP15.17■□□□□ 0.02
HLA-DQB1-202ENST00000399079 CALUO43852 315 aaPredicted RBP15.17■□□□□ 0.02
HLA-DQB1-202ENST00000399079 HNRNPA1P09651 372 aaKnown RBP eCLIP15.17■□□□□ 0.02
HLA-DQB1-202ENST00000399079 NR2F2P24468 414 aa15.17■□□□□ 0.02
HLA-DQB1-202ENST00000399079 UBE2HP62256 183 aa15.17■□□□□ 0.02
HLA-DQB1-202ENST00000399079 DLG4P78352 724 aa15.17■□□□□ 0.02
HLA-DQB1-202ENST00000399079 ZNF658Q5TYW1 1059 aaPredicted RBP15.17■□□□□ 0.02
HLA-DQB1-202ENST00000399079 TPGS2Q68CL5 300 aa15.17■□□□□ 0.02
HLA-DQB1-202ENST00000399079 TCEAL8Q8IYN2 117 aa15.17■□□□□ 0.02
HLA-DQB1-202ENST00000399079 HPDLQ96IR7 371 aa15.17■□□□□ 0.02
HLA-DQB1-202ENST00000399079 RHOBTB2Q9BYZ6 727 aa15.17■□□□□ 0.02
HLA-DQB1-202ENST00000399079 CRISPLD1Q9H336 500 aa15.17■□□□□ 0.02
HLA-DQB1-202ENST00000399079 HOOK1Q9UJC3 728 aaKnown RBP15.17■□□□□ 0.02
HLA-DQB1-202ENST00000399079 DSEQ9UL01 958 aa15.17■□□□□ 0.02
HLA-DQB1-202ENST00000399079 L1RE1Q9UN81 338 aa15.17■□□□□ 0.02
HLA-DQB1-202ENST00000399079 SNX9Q9Y5X1 595 aa15.17■□□□□ 0.02
HLA-DQB1-202ENST00000399079 DOCK6Q96HP0 2047 aa15.17■□□□□ 0.02
HLA-DQB1-202ENST00000399079 CLUHO75153 1309 aa15.17■□□□□ 0.02
HLA-DQB1-202ENST00000399079 OR6C75A6NL08 312 aa15.16■□□□□ 0.02
HLA-DQB1-202ENST00000399079 AKAP3O75969 853 aa15.16■□□□□ 0.02
HLA-DQB1-202ENST00000399079 HOXA9P31269 272 aa15.16■□□□□ 0.02
HLA-DQB1-202ENST00000399079 GPR17Q13304 367 aa15.16■□□□□ 0.02
HLA-DQB1-202ENST00000399079 ZCWPW2Q504Y3 356 aa15.16■□□□□ 0.02
HLA-DQB1-202ENST00000399079 CYP26C1Q6V0L0 522 aa15.16■□□□□ 0.02
HLA-DQB1-202ENST00000399079 METTL23Q86XA0 190 aa15.16■□□□□ 0.02
HLA-DQB1-202ENST00000399079 ELOA2Q8IYF1 753 aaPredicted RBP15.16■□□□□ 0.02
HLA-DQB1-202ENST00000399079 PDCL2Q8N4E4 241 aa15.16■□□□□ 0.02
HLA-DQB1-202ENST00000399079 OXCT2Q9BYC2 517 aaPredicted RBP15.16■□□□□ 0.02
HLA-DQB1-202ENST00000399079 GDAP2Q9NXN4 497 aa15.16■□□□□ 0.02
HLA-DQB1-202ENST00000399079 DNMT3BQ9UBC3 853 aaKnown RBP15.16■□□□□ 0.02
HLA-DQB1-202ENST00000399079 LIMD1Q9UGP4 676 aa15.16■□□□□ 0.02
HLA-DQB1-202ENST00000399079 AFF4Q9UHB7 1163 aaKnown RBP15.16■□□□□ 0.02
HLA-DQB1-202ENST00000399079 USTQ9Y2C2 406 aa15.16■□□□□ 0.02
HLA-DQB1-202ENST00000399079 R3HCC1Q9Y3T6 440 aaKnown RBP15.16■□□□□ 0.02
HLA-DQB1-202ENST00000399079 TSC2P49815 1807 aa15.15■□□□□ 0.02
HLA-DQB1-202ENST00000399079 ARHGEF37A1IGU5 675 aa15.15■□□□□ 0.02
HLA-DQB1-202ENST00000399079 PI4K2BG5E9Z4 385 aa15.15■□□□□ 0.02
HLA-DQB1-202ENST00000399079 HUS1O60921 280 aa15.15■□□□□ 0.02
HLA-DQB1-202ENST00000399079 MYO1EQ12965 1108 aa15.15■□□□□ 0.02
HLA-DQB1-202ENST00000399079 DUSP4Q13115 394 aa15.15■□□□□ 0.02
HLA-DQB1-202ENST00000399079 ADAM9Q13443 819 aa15.15■□□□□ 0.02
HLA-DQB1-202ENST00000399079 MYBPC2Q14324 1141 aa15.15■□□□□ 0.02
HLA-DQB1-202ENST00000399079 SOWAHAQ2M3V2 549 aa15.15■□□□□ 0.02
HLA-DQB1-202ENST00000399079 SLC39A12Q504Y0 691 aa15.15■□□□□ 0.02
HLA-DQB1-202ENST00000399079 LRRTM3Q86VH5 581 aa15.15■□□□□ 0.02
HLA-DQB1-202ENST00000399079 TTC9BQ8N6N2 239 aa15.15■□□□□ 0.02
HLA-DQB1-202ENST00000399079 TDRD5Q8NAT2 981 aaKnown RBP15.15■□□□□ 0.02
HLA-DQB1-202ENST00000399079 ATAD1Q8NBU5 361 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms