RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 DHX58Q96C10 678 aa14.52□□□□□ -0.09
VCX3A-202ENST00000398729 TMEM206Q9H813 350 aa14.52□□□□□ -0.09
VCX3A-202ENST00000398729 KBTBD4Q9NVX7 518 aa14.52□□□□□ -0.09
VCX3A-202ENST00000398729 MRPS23Q9Y3D9 190 aaKnown RBP14.52□□□□□ -0.09
VCX3A-202ENST00000398729 INSL5Q9Y5Q6 135 aa14.52□□□□□ -0.09
VCX3A-202ENST00000398729 NUMBLQ9Y6R0 609 aa14.52□□□□□ -0.09
VCX3A-202ENST00000398729 ANO9A1A5B4 782 aa14.51□□□□□ -0.09
VCX3A-202ENST00000398729 OR6C75A6NL08 312 aa14.51□□□□□ -0.09
VCX3A-202ENST00000398729 PIRO00625 290 aa14.51□□□□□ -0.09
VCX3A-202ENST00000398729 PPEF2O14830 753 aa14.51□□□□□ -0.09
VCX3A-202ENST00000398729 SEC24AO95486 1093 aa14.51□□□□□ -0.09
VCX3A-202ENST00000398729 LDHAP00338 332 aaKnown RBP14.51□□□□□ -0.09
VCX3A-202ENST00000398729 DCNP07585 359 aaKnown RBP14.51□□□□□ -0.09
VCX3A-202ENST00000398729 RHOP08100 348 aa14.51□□□□□ -0.09
VCX3A-202ENST00000398729 GLULP15104 373 aa14.51□□□□□ -0.09
VCX3A-202ENST00000398729 GARTP22102 1010 aa14.51□□□□□ -0.09
VCX3A-202ENST00000398729 ME1P48163 572 aa14.51□□□□□ -0.09
VCX3A-202ENST00000398729 OVOS1Q6IE37 1185 aa14.51□□□□□ -0.09
VCX3A-202ENST00000398729 SHC4Q6S5L8 630 aa14.51□□□□□ -0.09
VCX3A-202ENST00000398729 CRELD2Q6UXH1 353 aaPredicted RBP14.51□□□□□ -0.09
VCX3A-202ENST00000398729 NT5DC4Q86YG4 428 aa14.51□□□□□ -0.09
VCX3A-202ENST00000398729 ELMOD1Q8N336 334 aa14.51□□□□□ -0.09
VCX3A-202ENST00000398729 DCLK2Q8N568 766 aa14.51□□□□□ -0.09
VCX3A-202ENST00000398729 SENP8Q96LD8 212 aa14.51□□□□□ -0.09
VCX3A-202ENST00000398729 FAM213AQ9BRX8 229 aa14.51□□□□□ -0.09
VCX3A-202ENST00000398729 TRIM9Q9C026 710 aa14.51□□□□□ -0.09
VCX3A-202ENST00000398729 TBC1D17Q9HA65 648 aa14.51□□□□□ -0.09
VCX3A-202ENST00000398729 AVENQ9NQS1 362 aaPredicted RBP14.51□□□□□ -0.09
VCX3A-202ENST00000398729 DPP3Q9NY33 737 aa14.51□□□□□ -0.09
VCX3A-202ENST00000398729 CFAP45Q9UL16 551 aa14.51□□□□□ -0.09
VCX3A-202ENST00000398729 CA14Q9ULX7 337 aa14.51□□□□□ -0.09
VCX3A-202ENST00000398729 NOTCH4Q99466 2003 aa14.51□□□□□ -0.09
VCX3A-202ENST00000398729 TULP1O00294 542 aaPredicted RBP14.5□□□□□ -0.09
VCX3A-202ENST00000398729 ZNF197O14709 1029 aa14.5□□□□□ -0.09
VCX3A-202ENST00000398729 PRPF6O94906 941 aaKnown RBP14.5□□□□□ -0.09
VCX3A-202ENST00000398729 SP9P0CG40 484 aa14.5□□□□□ -0.09
VCX3A-202ENST00000398729 ASIC1P78348 528 aa14.5□□□□□ -0.09
VCX3A-202ENST00000398729 PKP1Q13835 747 aa14.5□□□□□ -0.09
VCX3A-202ENST00000398729 MYBPC2Q14324 1141 aa14.5□□□□□ -0.09
VCX3A-202ENST00000398729 IQCEQ6IPM2 695 aa14.5□□□□□ -0.09
VCX3A-202ENST00000398729 PARM1Q6UWI2 310 aa14.5□□□□□ -0.09
VCX3A-202ENST00000398729 RNF19BQ6ZMZ0 732 aa14.5□□□□□ -0.09
VCX3A-202ENST00000398729 DGLUCYQ7Z3D6 616 aa14.5□□□□□ -0.09
VCX3A-202ENST00000398729 NPAS3Q8IXF0 933 aa14.5□□□□□ -0.09
VCX3A-202ENST00000398729 MAML2Q8IZL2 1156 aaPredicted RBP14.5□□□□□ -0.09
VCX3A-202ENST00000398729 ST13P5Q8NFI4 369 aaPredicted RBP14.5□□□□□ -0.09
VCX3A-202ENST00000398729 GPR152Q8TDT2 470 aa14.5□□□□□ -0.09
VCX3A-202ENST00000398729 ING5Q8WYH8 240 aa14.5□□□□□ -0.09
VCX3A-202ENST00000398729 FGF14Q92915 247 aa14.5□□□□□ -0.09
VCX3A-202ENST00000398729 SAAL1Q96ER3 474 aa14.5□□□□□ -0.09
VCX3A-202ENST00000398729 ZNF512Q96ME7 567 aaPredicted RBP14.5□□□□□ -0.09
VCX3A-202ENST00000398729 CORO1BQ9BR76 489 aa14.5□□□□□ -0.09
VCX3A-202ENST00000398729 FGFBP2Q9BYJ0 223 aa14.5□□□□□ -0.09
VCX3A-202ENST00000398729 MAGEF1Q9HAY2 307 aa14.5□□□□□ -0.09
VCX3A-202ENST00000398729 FAM13BQ9NYF5 915 aa14.5□□□□□ -0.09
VCX3A-202ENST00000398729 GDE1Q9NZC3 331 aa14.5□□□□□ -0.09
VCX3A-202ENST00000398729 DSEQ9UL01 958 aa14.5□□□□□ -0.09
VCX3A-202ENST00000398729 CHD8Q9HCK8 2581 aa14.49□□□□□ -0.09
VCX3A-202ENST00000398729 KIAA0391O15091 583 aaKnown RBP14.49□□□□□ -0.09
VCX3A-202ENST00000398729 SPTLC1O15269 473 aa14.49□□□□□ -0.09
VCX3A-202ENST00000398729 POLR2DO15514 142 aaKnown RBP14.49□□□□□ -0.09
VCX3A-202ENST00000398729 EXTL3O43909 919 aa14.49□□□□□ -0.09
VCX3A-202ENST00000398729 OR4Q2P0C623 313 aa14.49□□□□□ -0.09
VCX3A-202ENST00000398729 RFX1P22670 979 aa14.49□□□□□ -0.09
VCX3A-202ENST00000398729 TAF6P49848 677 aa14.49□□□□□ -0.09
VCX3A-202ENST00000398729 TWF1Q12792 350 aa14.49□□□□□ -0.09
VCX3A-202ENST00000398729 GPR17Q13304 367 aa14.49□□□□□ -0.09
VCX3A-202ENST00000398729 CYP4A22Q5TCH4 519 aa14.49□□□□□ -0.09
VCX3A-202ENST00000398729 PHLDB3Q6NSJ2 640 aa14.49□□□□□ -0.09
VCX3A-202ENST00000398729 ARMCX5Q6P1M9 558 aa14.49□□□□□ -0.09
VCX3A-202ENST00000398729 PDZD4Q76G19 769 aaPredicted RBP14.49□□□□□ -0.09
VCX3A-202ENST00000398729 BRSK2Q8IWQ3 736 aa14.49□□□□□ -0.09
VCX3A-202ENST00000398729 EFCAB13Q8IY85 973 aa14.49□□□□□ -0.09
VCX3A-202ENST00000398729 PGLYRP2Q96PD5 576 aa14.49□□□□□ -0.09
VCX3A-202ENST00000398729 RPP25Q9BUL9 199 aaKnown RBP14.49□□□□□ -0.09
VCX3A-202ENST00000398729 SLC2A4RGQ9NR83 387 aa14.49□□□□□ -0.09
VCX3A-202ENST00000398729 DLL3Q9NYJ7 618 aa14.49□□□□□ -0.09
VCX3A-202ENST00000398729 RBAKQ9NYW8 714 aaPredicted RBP14.49□□□□□ -0.09
VCX3A-202ENST00000398729 PCDHA7Q9UN72 937 aa14.49□□□□□ -0.09
VCX3A-202ENST00000398729 SIT1Q9Y3P8 196 aa14.49□□□□□ -0.09
VCX3A-202ENST00000398729 FANCMQ8IYD8 2048 aa14.49□□□□□ -0.09
VCX3A-202ENST00000398729 SCN1AP35498 2009 aa14.48□□□□□ -0.09
VCX3A-202ENST00000398729 LRRN2O75325 713 aa14.48□□□□□ -0.09
VCX3A-202ENST00000398729 CYP11A1P05108 521 aa14.48□□□□□ -0.09
VCX3A-202ENST00000398729 PNPLA4P41247 253 aa14.48□□□□□ -0.09
VCX3A-202ENST00000398729 TFAMQ00059 246 aaKnown RBP14.48□□□□□ -0.09
VCX3A-202ENST00000398729 DNM1Q05193 864 aaKnown RBP14.48□□□□□ -0.09
VCX3A-202ENST00000398729 PLD1Q13393 1074 aa14.48□□□□□ -0.09
VCX3A-202ENST00000398729 SLC5A9Q2M3M2 681 aa14.48□□□□□ -0.09
VCX3A-202ENST00000398729 SV2CQ496J9 727 aa14.48□□□□□ -0.09
VCX3A-202ENST00000398729 CNNM4Q6P4Q7 775 aa14.48□□□□□ -0.09
VCX3A-202ENST00000398729 METTL23Q86XA0 190 aa14.48□□□□□ -0.09
VCX3A-202ENST00000398729 C1orf210Q8IVY1 113 aa14.48□□□□□ -0.09
VCX3A-202ENST00000398729 SUMF1Q8NBK3 374 aa14.48□□□□□ -0.09
VCX3A-202ENST00000398729 LEMD2Q8NC56 503 aa14.48□□□□□ -0.09
VCX3A-202ENST00000398729 NOC3LQ8WTT2 800 aaKnown RBP14.48□□□□□ -0.09
VCX3A-202ENST00000398729 CACTINQ8WUQ7 758 aaKnown RBP14.48□□□□□ -0.09
VCX3A-202ENST00000398729 MCRS1Q96EZ8 462 aa14.48□□□□□ -0.09
VCX3A-202ENST00000398729 ZNF560Q96MR9 790 aa14.48□□□□□ -0.09
VCX3A-202ENST00000398729 C7orf25Q9BPX7 421 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms